RNA–Protein interactions for RNA: ENST00000534208.5

NDUFS3-212, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 4 BASIC

Gene NDUFS3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-212ENST00000534208 COL14A1Q05707 1796 aaKnown RBP28.58■■■□□ 2.17
NDUFS3-212ENST00000534208 POLR3AO14802 1390 aaPredicted RBP28.58■■■□□ 2.17
NDUFS3-212ENST00000534208 PAK3O75914 559 aaPredicted RBP28.57■■■□□ 2.16
NDUFS3-212ENST00000534208 CCDC61Q9Y6R9 512 aa28.57■■■□□ 2.16
NDUFS3-212ENST00000534208 BRWD3Q6RI45 1802 aa28.56■■■□□ 2.16
NDUFS3-212ENST00000534208 SEPT12Q8IYM1 358 aa28.55■■■□□ 2.16
NDUFS3-212ENST00000534208 PLEKHG3A1L390 1219 aa28.54■■■□□ 2.16
NDUFS3-212ENST00000534208 BTG4Q9NY30 223 aa28.54■■■□□ 2.16
NDUFS3-212ENST00000534208 CCDC9Q9Y3X0 531 aaKnown RBP28.54■■■□□ 2.16
NDUFS3-212ENST00000534208 L3MBTL2Q969R5 705 aa28.53■■■□□ 2.16
NDUFS3-212ENST00000534208 ACEP12821 1306 aa28.52■■■□□ 2.16
NDUFS3-212ENST00000534208 CENPJQ9HC77 1338 aaPredicted RBP28.52■■■□□ 2.16
NDUFS3-212ENST00000534208 NBPF8Q3BBV2 869 aa28.51■■■□□ 2.15
NDUFS3-212ENST00000534208 BLMP54132 1417 aaPredicted RBP28.49■■■□□ 2.15
NDUFS3-212ENST00000534208 PHRF1Q9P1Y6 1649 aaKnown RBP28.47■■■□□ 2.15
NDUFS3-212ENST00000534208 PRDM11Q9NQV5 511 aa28.47■■■□□ 2.15
NDUFS3-212ENST00000534208 QRICH2Q9H0J4 1663 aa28.47■■■□□ 2.15
NDUFS3-212ENST00000534208 SIN3AQ96ST3 1273 aa28.46■■■□□ 2.15
NDUFS3-212ENST00000534208 TRPM1Q7Z4N2 1603 aa28.45■■■□□ 2.14
NDUFS3-212ENST00000534208 SRPK2P78362 688 aaKnown RBP28.45■■■□□ 2.14
NDUFS3-212ENST00000534208 KRT27Q7Z3Y8 459 aa28.45■■■□□ 2.14
NDUFS3-212ENST00000534208 PPIP5K1Q6PFW1 1433 aa28.44■■■□□ 2.14
NDUFS3-212ENST00000534208 KIAA0232Q92628 1395 aa28.44■■■□□ 2.14
NDUFS3-212ENST00000534208 SPATA31A5Q5VU36 1347 aa28.43■■■□□ 2.14
NDUFS3-212ENST00000534208 SPATA31A7Q8IWB4 1347 aa28.43■■■□□ 2.14
NDUFS3-212ENST00000534208 FAM98CQ17RN3 349 aaKnown RBP28.42■■■□□ 2.14
NDUFS3-212ENST00000534208 CABP2Q9NPB3 220 aa28.42■■■□□ 2.14
NDUFS3-212ENST00000534208 NUTM2GQ5VZR2 741 aa28.41■■■□□ 2.14
NDUFS3-212ENST00000534208 BRD4O60885 1362 aaPredicted RBP28.4■■■□□ 2.14
NDUFS3-212ENST00000534208 ZRANB1Q9UGI0 708 aa28.4■■■□□ 2.14
NDUFS3-212ENST00000534208 ABTB2Q8N961 1025 aa28.39■■■□□ 2.14
NDUFS3-212ENST00000534208 NRKQ7Z2Y5 1582 aa28.38■■■□□ 2.13
NDUFS3-212ENST00000534208 A0A0G2JS52 829 aa28.38■■■□□ 2.13
NDUFS3-212ENST00000534208 MYT1Q01538 1121 aa28.38■■■□□ 2.13
NDUFS3-212ENST00000534208 NEUROD1Q13562 356 aa28.38■■■□□ 2.13
NDUFS3-212ENST00000534208 USP19O94966 1318 aa28.38■■■□□ 2.13
NDUFS3-212ENST00000534208 THSD7AQ9UPZ6 1657 aa28.37■■■□□ 2.13
NDUFS3-212ENST00000534208 SRCAPQ6ZRS2 3230 aa28.37■■■□□ 2.13
NDUFS3-212ENST00000534208 ZC3H6P61129 1189 aaKnown RBP28.36■■■□□ 2.13
NDUFS3-212ENST00000534208 SF3B2Q13435 895 aaKnown RBP28.36■■■□□ 2.13
NDUFS3-212ENST00000534208 CHRNA2Q15822 529 aa28.36■■■□□ 2.13
NDUFS3-212ENST00000534208 ROCK2O75116 1388 aaKnown RBP28.36■■■□□ 2.13
NDUFS3-212ENST00000534208 CPDO75976 1380 aa28.36■■■□□ 2.13
NDUFS3-212ENST00000534208 SPATA31A1Q5TZJ5 1347 aa28.35■■■□□ 2.13
NDUFS3-212ENST00000534208 EVC2Q86UK5 1308 aa28.34■■■□□ 2.13
NDUFS3-212ENST00000534208 NLRP13Q86W25 1043 aa28.33■■■□□ 2.13
NDUFS3-212ENST00000534208 CABP1Q9NZU7 370 aa28.33■■■□□ 2.13
NDUFS3-212ENST00000534208 DEFB132Q7Z7B7 95 aa28.32■■■□□ 2.12
NDUFS3-212ENST00000534208 USP6P35125 1406 aa28.32■■■□□ 2.12
NDUFS3-212ENST00000534208 LMO7Q8WWI1 1683 aa28.3■■■□□ 2.12
NDUFS3-212ENST00000534208 SSH2Q76I76 1423 aa28.29■■■□□ 2.12
NDUFS3-212ENST00000534208 STRN4Q9NRL3 753 aa28.29■■■□□ 2.12
NDUFS3-212ENST00000534208 CAMTA1Q9Y6Y1 1673 aa28.29■■■□□ 2.12
NDUFS3-212ENST00000534208 GCP02774 474 aa28.28■■■□□ 2.12
NDUFS3-212ENST00000534208 EVA1CP58658 441 aa28.25■■■□□ 2.11
NDUFS3-212ENST00000534208 BARGINQ6ZT62 677 aa28.24■■■□□ 2.11
NDUFS3-212ENST00000534208 RGPD1P0DJD0 1748 aa28.23■■■□□ 2.11
NDUFS3-212ENST00000534208 SLIT3O75094 1523 aa28.23■■■□□ 2.11
NDUFS3-212ENST00000534208 BAG6P46379 1132 aa28.23■■■□□ 2.11
NDUFS3-212ENST00000534208 NLRP6P59044 892 aa28.22■■■□□ 2.11
NDUFS3-212ENST00000534208 SBNO2Q9Y2G9 1366 aa28.22■■■□□ 2.11
NDUFS3-212ENST00000534208 FAM182BQ5T319 152 aa28.21■■■□□ 2.11
NDUFS3-212ENST00000534208 LARP1Q6PKG0 1096 aaKnown RBP28.21■■■□□ 2.11
NDUFS3-212ENST00000534208 ZNF692Q9BU19 519 aaPredicted RBP28.21■■■□□ 2.11
NDUFS3-212ENST00000534208 PIK3C2AO00443 1686 aa28.21■■■□□ 2.11
NDUFS3-212ENST00000534208 AKAP12Q02952 1782 aa28.19■■■□□ 2.1
NDUFS3-212ENST00000534208 USP35Q9P2H5 1018 aa28.19■■■□□ 2.1
NDUFS3-212ENST00000534208 COL5A2P05997 1499 aaPredicted RBP28.19■■■□□ 2.1
NDUFS3-212ENST00000534208 DISP2A7MBM2 1401 aa28.18■■■□□ 2.1
NDUFS3-212ENST00000534208 TCP11L2Q8N4U5 519 aa28.18■■■□□ 2.1
NDUFS3-212ENST00000534208 AATKQ6ZMQ8 1374 aa28.18■■■□□ 2.1
NDUFS3-212ENST00000534208 FAM196AQ6ZSG2 479 aa28.17■■■□□ 2.1
NDUFS3-212ENST00000534208 THRAP3Q9Y2W1 955 aaKnown RBP28.17■■■□□ 2.1
NDUFS3-212ENST00000534208 CPSF1Q10570 1443 aaKnown RBP28.17■■■□□ 2.1
NDUFS3-212ENST00000534208 TNS1Q9HBL0 1735 aaKnown RBP28.16■■■□□ 2.1
NDUFS3-212ENST00000534208 TTC21BQ7Z4L5 1316 aa28.16■■■□□ 2.1
NDUFS3-212ENST00000534208 CARD11Q9BXL7 1154 aa28.15■■■□□ 2.1
NDUFS3-212ENST00000534208 TONSLQ96HA7 1378 aa28.14■■■□□ 2.1
NDUFS3-212ENST00000534208 TTC21AQ8NDW8 1320 aa28.14■■■□□ 2.09
NDUFS3-212ENST00000534208 CRB1P82279 1406 aa28.12■■■□□ 2.09
NDUFS3-212ENST00000534208 EN1Q05925 392 aaPredicted RBP28.12■■■□□ 2.09
NDUFS3-212ENST00000534208 COL18A1P39060 1754 aa28.11■■■□□ 2.09
NDUFS3-212ENST00000534208 PDE3BQ13370 1112 aa28.11■■■□□ 2.09
NDUFS3-212ENST00000534208 PARP4Q9UKK3 1724 aaKnown RBP28.1■■■□□ 2.09
NDUFS3-212ENST00000534208 KTN1Q86UP2 1357 aaKnown RBP28.1■■■□□ 2.09
NDUFS3-212ENST00000534208 KCNH5Q8NCM2 988 aa28.09■■■□□ 2.09
NDUFS3-212ENST00000534208 MON2Q7Z3U7 1717 aa28.09■■■□□ 2.09
NDUFS3-212ENST00000534208 ZBTB7CA1YPR0 619 aa28.08■■■□□ 2.09
NDUFS3-212ENST00000534208 TRIM37O94972 964 aa28.08■■■□□ 2.09
NDUFS3-212ENST00000534208 TRIM26Q12899 539 aaPredicted RBP28.08■■■□□ 2.09
NDUFS3-212ENST00000534208 ARHGEF25Q86VW2 580 aa28.07■■■□□ 2.08
NDUFS3-212ENST00000534208 NFAT5O94916 1531 aa28.04■■■□□ 2.08
NDUFS3-212ENST00000534208 CD163L1Q9NR16 1453 aa28.04■■■□□ 2.08
NDUFS3-212ENST00000534208 PARD3Q8TEW0 1356 aa28.04■■■□□ 2.08
NDUFS3-212ENST00000534208 CAMKK2Q96RR4 588 aa28.04■■■□□ 2.08
NDUFS3-212ENST00000534208 AXIN2Q9Y2T1 843 aa28.04■■■□□ 2.08
NDUFS3-212ENST00000534208 WDR17Q8IZU2 1322 aa28.03■■■□□ 2.08
NDUFS3-212ENST00000534208 LRP5O75197 1615 aa28.03■■■□□ 2.08
NDUFS3-212ENST00000534208 C11orf95C9JLR9 678 aaPredicted RBP28.02■■■□□ 2.08
NDUFS3-212ENST00000534208 TOM1L2Q6ZVM7 507 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms