RNA–Protein interactions for RNA: ENST00000532791.5

FGFR1-238, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FGFR1, Length 5,590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-238ENST00000532791 PRAM1Q96QH2 718 aa23.43■■□□□ 1.34
FGFR1-238ENST00000532791 STRN4Q9NRL3 753 aa23.42■■□□□ 1.34
FGFR1-238ENST00000532791 TATP17735 454 aaPredicted RBP23.42■■□□□ 1.34
FGFR1-238ENST00000532791 ACBD3Q9H3P7 528 aa23.42■■□□□ 1.34
FGFR1-238ENST00000532791 AQRO60306 1485 aaKnown RBP eCLIP23.42■■□□□ 1.34
FGFR1-238ENST00000532791 ATP2B1P20020 1258 aa23.41■■□□□ 1.34
FGFR1-238ENST00000532791 FAM43AQ8N2R8 423 aa23.41■■□□□ 1.34
FGFR1-238ENST00000532791 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.41■■□□□ 1.34
FGFR1-238ENST00000532791 GNAI2P04899 355 aa23.41■■□□□ 1.34
FGFR1-238ENST00000532791 ZFYVE27Q5T4F4 411 aa23.41■■□□□ 1.34
FGFR1-238ENST00000532791 CNNM1Q9NRU3 951 aa23.41■■□□□ 1.34
FGFR1-238ENST00000532791 NEK4P51957 841 aa23.4■■□□□ 1.34
FGFR1-238ENST00000532791 TTC39AQ5SRH9 613 aa23.4■■□□□ 1.34
FGFR1-238ENST00000532791 RRP12Q5JTH9 1297 aaKnown RBP23.4■■□□□ 1.34
FGFR1-238ENST00000532791 CCDC158Q5M9N0 1113 aa23.39■■□□□ 1.34
FGFR1-238ENST00000532791 CDCA7LQ96GN5 454 aa23.39■■□□□ 1.34
FGFR1-238ENST00000532791 C1orf115Q9H7X2 142 aa23.39■■□□□ 1.34
FGFR1-238ENST00000532791 CCDC173Q0VFZ6 552 aa23.38■■□□□ 1.33
FGFR1-238ENST00000532791 KINO60870 393 aaKnown RBP23.38■■□□□ 1.33
FGFR1-238ENST00000532791 CCDC39Q9UFE4 941 aa23.38■■□□□ 1.33
FGFR1-238ENST00000532791 PDCP20941 246 aa23.38■■□□□ 1.33
FGFR1-238ENST00000532791 GCC1Q96CN9 775 aa23.38■■□□□ 1.33
FGFR1-238ENST00000532791 CDK5RAP3Q96JB5 506 aa23.38■■□□□ 1.33
FGFR1-238ENST00000532791 LETM1O95202 739 aaPredicted RBP23.38■■□□□ 1.33
FGFR1-238ENST00000532791 NFKBIBQ15653 356 aa23.38■■□□□ 1.33
FGFR1-238ENST00000532791 RNF214Q8ND24 703 aa23.38■■□□□ 1.33
FGFR1-238ENST00000532791 GNL3LQ9NVN8 582 aaKnown RBP23.38■■□□□ 1.33
FGFR1-238ENST00000532791 PDZRN3Q9UPQ7 1066 aa23.38■■□□□ 1.33
FGFR1-238ENST00000532791 NASPP49321 788 aaPredicted RBP23.37■■□□□ 1.33
FGFR1-238ENST00000532791 MCM2P49736 904 aa23.37■■□□□ 1.33
FGFR1-238ENST00000532791 HDGFL1Q5TGJ6 251 aa23.37■■□□□ 1.33
FGFR1-238ENST00000532791 CASKIN1Q8WXD9 1431 aa23.37■■□□□ 1.33
FGFR1-238ENST00000532791 HSP90AB2PQ58FF8 381 aa23.37■■□□□ 1.33
FGFR1-238ENST00000532791 SCAPERQ9BY12 1400 aa23.36■■□□□ 1.33
FGFR1-238ENST00000532791 SLC4A2P04920 1241 aa23.36■■□□□ 1.33
FGFR1-238ENST00000532791 CAGE1Q8TC20 777 aa23.36■■□□□ 1.33
FGFR1-238ENST00000532791 NOB1Q9ULX3 412 aaKnown RBP23.36■■□□□ 1.33
FGFR1-238ENST00000532791 TXLNAP40222 546 aa23.36■■□□□ 1.33
FGFR1-238ENST00000532791 HSP90B2PQ58FF3 399 aa23.36■■□□□ 1.33
FGFR1-238ENST00000532791 MRE11P49959 708 aa23.35■■□□□ 1.33
FGFR1-238ENST00000532791 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.35■■□□□ 1.33
FGFR1-238ENST00000532791 RABEP1Q15276 862 aa23.35■■□□□ 1.33
FGFR1-238ENST00000532791 TRIM5Q9C035 493 aa23.35■■□□□ 1.33
FGFR1-238ENST00000532791 MBD3O95983 291 aa23.34■■□□□ 1.33
FGFR1-238ENST00000532791 CABP4P57796 275 aa23.34■■□□□ 1.33
FGFR1-238ENST00000532791 SULT6B1Q6IMI4 303 aa23.34■■□□□ 1.33
FGFR1-238ENST00000532791 ZNF396Q96N95 335 aaPredicted RBP23.34■■□□□ 1.33
FGFR1-238ENST00000532791 TMEM132AQ24JP5 1023 aa23.34■■□□□ 1.33
FGFR1-238ENST00000532791 TSR2Q969E8 191 aaKnown RBP23.34■■□□□ 1.33
FGFR1-238ENST00000532791 KIF21BO75037 1637 aa23.34■■□□□ 1.33
FGFR1-238ENST00000532791 SMC2O95347 1197 aa23.33■■□□□ 1.33
FGFR1-238ENST00000532791 TTLL5Q6EMB2 1281 aa23.33■■□□□ 1.33
FGFR1-238ENST00000532791 CDK19Q9BWU1 502 aa23.33■■□□□ 1.33
FGFR1-238ENST00000532791 SYNJ2O15056 1496 aa23.33■■□□□ 1.32
FGFR1-238ENST00000532791 CAVIN1Q6NZI2 390 aaKnown RBP23.33■■□□□ 1.32
FGFR1-238ENST00000532791 PNISRQ8TF01 805 aaKnown RBP23.33■■□□□ 1.32
FGFR1-238ENST00000532791 CCT4P50991 539 aaKnown RBP23.32■■□□□ 1.32
FGFR1-238ENST00000532791 FILIP1LQ4L180 1135 aa23.32■■□□□ 1.32
FGFR1-238ENST00000532791 STK38Q15208 465 aa23.32■■□□□ 1.32
FGFR1-238ENST00000532791 MAGEC2Q9UBF1 373 aaPredicted RBP23.32■■□□□ 1.32
FGFR1-238ENST00000532791 ZNF692Q9BU19 519 aaPredicted RBP23.32■■□□□ 1.32
FGFR1-238ENST00000532791 KRT18P05783 430 aaKnown RBP23.31■■□□□ 1.32
FGFR1-238ENST00000532791 PDE3AQ14432 1141 aa23.31■■□□□ 1.32
FGFR1-238ENST00000532791 BCL11BQ9C0K0 894 aaPredicted RBP23.31■■□□□ 1.32
FGFR1-238ENST00000532791 CCAR1Q8IX12 1150 aaKnown RBP23.31■■□□□ 1.32
FGFR1-238ENST00000532791 VSIG10Q8N0Z9 540 aa23.31■■□□□ 1.32
FGFR1-238ENST00000532791 NBPF1Q3BBV0 1214 aa23.3■■□□□ 1.32
FGFR1-238ENST00000532791 ZNF530Q6P9A1 599 aaPredicted RBP23.3■■□□□ 1.32
FGFR1-238ENST00000532791 TOM1L2Q6ZVM7 507 aa23.3■■□□□ 1.32
FGFR1-238ENST00000532791 THEMISQ8N1K5 641 aaPredicted RBP23.3■■□□□ 1.32
FGFR1-238ENST00000532791 SLC12A5Q9H2X9 1139 aa23.3■■□□□ 1.32
FGFR1-238ENST00000532791 CABP1Q9NZU7 370 aa23.3■■□□□ 1.32
FGFR1-238ENST00000532791 FMNL2Q96PY5 1086 aa23.3■■□□□ 1.32
FGFR1-238ENST00000532791 HFM1A2PYH4 1435 aa23.3■■□□□ 1.32
FGFR1-238ENST00000532791 TRAK2O60296 914 aa23.3■■□□□ 1.32
FGFR1-238ENST00000532791 SMARCE1Q969G3 411 aa23.3■■□□□ 1.32
FGFR1-238ENST00000532791 PRPF40AO75400 957 aaKnown RBP23.3■■□□□ 1.32
FGFR1-238ENST00000532791 RDXP35241 583 aaKnown RBP23.3■■□□□ 1.32
FGFR1-238ENST00000532791 SRCIN1Q9C0H9 1055 aa23.3■■□□□ 1.32
FGFR1-238ENST00000532791 SIL1Q9H173 461 aa23.29■■□□□ 1.32
FGFR1-238ENST00000532791 FIBPO43427 364 aa23.29■■□□□ 1.32
FGFR1-238ENST00000532791 DDX54Q8TDD1 881 aaKnown RBP23.29■■□□□ 1.32
FGFR1-238ENST00000532791 LRRCC1Q9C099 1032 aa23.29■■□□□ 1.32
FGFR1-238ENST00000532791 TSPY26PQ9H489 355 aa23.29■■□□□ 1.32
FGFR1-238ENST00000532791 NACAP1Q9BZK3 213 aa23.29■■□□□ 1.32
FGFR1-238ENST00000532791 SPG7Q9UQ90 795 aa23.29■■□□□ 1.32
FGFR1-238ENST00000532791 CEBPZQ03701 1054 aaKnown RBP23.29■■□□□ 1.32
FGFR1-238ENST00000532791 CYP46A1Q9Y6A2 500 aa23.28■■□□□ 1.32
FGFR1-238ENST00000532791 ATP2B2Q01814 1243 aa23.28■■□□□ 1.32
FGFR1-238ENST00000532791 PIP4K2AP48426 406 aaPredicted RBP23.27■■□□□ 1.32
FGFR1-238ENST00000532791 WWC2Q6AWC2 1192 aa23.27■■□□□ 1.32
FGFR1-238ENST00000532791 BRPF1P55201 1214 aaPredicted RBP23.27■■□□□ 1.32
FGFR1-238ENST00000532791 JMYQ8N9B5 988 aa23.27■■□□□ 1.32
FGFR1-238ENST00000532791 MYO6Q9UM54 1294 aa23.26■■□□□ 1.31
FGFR1-238ENST00000532791 GRIN2BQ13224 1484 aa23.26■■□□□ 1.31
FGFR1-238ENST00000532791 DCAF8L1A6NGE4 600 aa23.25■■□□□ 1.31
FGFR1-238ENST00000532791 TRIM22Q8IYM9 498 aa23.25■■□□□ 1.31
FGFR1-238ENST00000532791 ERCC4Q92889 916 aaPredicted RBP23.25■■□□□ 1.31
FGFR1-238ENST00000532791 PRG4Q92954 1404 aaPredicted RBP23.25■■□□□ 1.31
FGFR1-238ENST00000532791 BCAR3O75815 825 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms