RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 BRWD3Q6RI45 1802 aa25.67■■□□□ 1.7
SMG1-203ENST00000532700 UNC5CLQ8IV45 518 aa25.66■■□□□ 1.7
SMG1-203ENST00000532700 CABP2Q9NPB3 220 aa25.66■■□□□ 1.7
SMG1-203ENST00000532700 ACEP12821 1306 aa25.65■■□□□ 1.7
SMG1-203ENST00000532700 FAM83GA6ND36 823 aa25.65■■□□□ 1.7
SMG1-203ENST00000532700 HAP1P54257 671 aaPredicted RBP25.65■■□□□ 1.7
SMG1-203ENST00000532700 COL14A1Q05707 1796 aaKnown RBP25.64■■□□□ 1.7
SMG1-203ENST00000532700 TRIM26Q12899 539 aaPredicted RBP25.64■■□□□ 1.7
SMG1-203ENST00000532700 GJD4Q96KN9 370 aaPredicted RBP25.64■■□□□ 1.7
SMG1-203ENST00000532700 PAK3O75914 559 aaPredicted RBP25.63■■□□□ 1.69
SMG1-203ENST00000532700 ROCK2O75116 1388 aaKnown RBP25.63■■□□□ 1.69
SMG1-203ENST00000532700 PPIP5K1Q6PFW1 1433 aa25.63■■□□□ 1.69
SMG1-203ENST00000532700 CCDC61Q9Y6R9 512 aa25.62■■□□□ 1.69
SMG1-203ENST00000532700 PLEKHG3A1L390 1219 aa25.61■■□□□ 1.69
SMG1-203ENST00000532700 NUTM2GQ5VZR2 741 aa25.61■■□□□ 1.69
SMG1-203ENST00000532700 NRKQ7Z2Y5 1582 aa25.61■■□□□ 1.69
SMG1-203ENST00000532700 SRPK2P78362 688 aaKnown RBP25.6■■□□□ 1.69
SMG1-203ENST00000532700 VPS72Q15906 364 aa25.55■■□□□ 1.68
SMG1-203ENST00000532700 EP400Q96L91 3159 aa25.54■■□□□ 1.68
SMG1-203ENST00000532700 AKAP12Q02952 1782 aa25.54■■□□□ 1.68
SMG1-203ENST00000532700 BTG4Q9NY30 223 aa25.54■■□□□ 1.68
SMG1-203ENST00000532700 PIK3C2AO00443 1686 aa25.53■■□□□ 1.68
SMG1-203ENST00000532700 ATAD2Q6PL18 1390 aa25.53■■□□□ 1.68
SMG1-203ENST00000532700 KIAA0232Q92628 1395 aa25.53■■□□□ 1.68
SMG1-203ENST00000532700 CABP1Q9NZU7 370 aa25.52■■□□□ 1.68
SMG1-203ENST00000532700 TONSLQ96HA7 1378 aa25.52■■□□□ 1.68
SMG1-203ENST00000532700 CHRNA2Q15822 529 aa25.51■■□□□ 1.67
SMG1-203ENST00000532700 USP6P35125 1406 aa25.51■■□□□ 1.67
SMG1-203ENST00000532700 LMO7Q8WWI1 1683 aa25.5■■□□□ 1.67
SMG1-203ENST00000532700 SSH2Q76I76 1423 aa25.49■■□□□ 1.67
SMG1-203ENST00000532700 USP19O94966 1318 aa25.48■■□□□ 1.67
SMG1-203ENST00000532700 ZC3H6P61129 1189 aaKnown RBP25.48■■□□□ 1.67
SMG1-203ENST00000532700 SEPT12Q8IYM1 358 aa25.48■■□□□ 1.67
SMG1-203ENST00000532700 CCDC9Q9Y3X0 531 aaKnown RBP25.48■■□□□ 1.67
SMG1-203ENST00000532700 EVC2Q86UK5 1308 aa25.47■■□□□ 1.67
SMG1-203ENST00000532700 PRDM11Q9NQV5 511 aa25.47■■□□□ 1.67
SMG1-203ENST00000532700 THSD7AQ9UPZ6 1657 aa25.47■■□□□ 1.67
SMG1-203ENST00000532700 ABTB2Q8N961 1025 aa25.46■■□□□ 1.67
SMG1-203ENST00000532700 CAMTA1Q9Y6Y1 1673 aa25.45■■□□□ 1.67
SMG1-203ENST00000532700 CARD11Q9BXL7 1154 aa25.45■■□□□ 1.66
SMG1-203ENST00000532700 MON2Q7Z3U7 1717 aa25.45■■□□□ 1.66
SMG1-203ENST00000532700 ONECUT3O60422 494 aaPredicted RBP25.44■■□□□ 1.66
SMG1-203ENST00000532700 SLIT3O75094 1523 aa25.43■■□□□ 1.66
SMG1-203ENST00000532700 FAM98CQ17RN3 349 aaKnown RBP25.42■■□□□ 1.66
SMG1-203ENST00000532700 SBNO2Q9Y2G9 1366 aa25.42■■□□□ 1.66
SMG1-203ENST00000532700 SPATA31A5Q5VU36 1347 aa25.41■■□□□ 1.66
SMG1-203ENST00000532700 SPATA31A7Q8IWB4 1347 aa25.41■■□□□ 1.66
SMG1-203ENST00000532700 CD163L1Q9NR16 1453 aa25.4■■□□□ 1.66
SMG1-203ENST00000532700 CPSF1Q10570 1443 aaKnown RBP25.4■■□□□ 1.66
SMG1-203ENST00000532700 COL18A1P39060 1754 aa25.39■■□□□ 1.66
SMG1-203ENST00000532700 CPDO75976 1380 aa25.38■■□□□ 1.65
SMG1-203ENST00000532700 STRN4Q9NRL3 753 aa25.37■■□□□ 1.65
SMG1-203ENST00000532700 BRD4O60885 1362 aaPredicted RBP25.36■■□□□ 1.65
SMG1-203ENST00000532700 GCP02774 474 aa25.36■■□□□ 1.65
SMG1-203ENST00000532700 RGPD5Q99666 1765 aa25.36■■□□□ 1.65
SMG1-203ENST00000532700 FAM182BQ5T319 152 aa25.35■■□□□ 1.65
SMG1-203ENST00000532700 NLRP13Q86W25 1043 aa25.35■■□□□ 1.65
SMG1-203ENST00000532700 SPATA31A1Q5TZJ5 1347 aa25.35■■□□□ 1.65
SMG1-203ENST00000532700 TTC21BQ7Z4L5 1316 aa25.35■■□□□ 1.65
SMG1-203ENST00000532700 KRT27Q7Z3Y8 459 aa25.34■■□□□ 1.65
SMG1-203ENST00000532700 A0A0G2JS52 829 aa25.33■■□□□ 1.65
SMG1-203ENST00000532700 NLRP6P59044 892 aa25.33■■□□□ 1.65
SMG1-203ENST00000532700 MYT1Q01538 1121 aa25.33■■□□□ 1.65
SMG1-203ENST00000532700 COL5A2P05997 1499 aaPredicted RBP25.33■■□□□ 1.65
SMG1-203ENST00000532700 BLMP54132 1417 aaPredicted RBP25.32■■□□□ 1.64
SMG1-203ENST00000532700 LARP1Q6PKG0 1096 aaKnown RBP25.32■■□□□ 1.64
SMG1-203ENST00000532700 TESK2Q96S53 571 aa25.32■■□□□ 1.64
SMG1-203ENST00000532700 ZRANB1Q9UGI0 708 aa25.32■■□□□ 1.64
SMG1-203ENST00000532700 USP54Q70EL1 1684 aa25.32■■□□□ 1.64
SMG1-203ENST00000532700 NFAT5O94916 1531 aa25.32■■□□□ 1.64
SMG1-203ENST00000532700 KTN1Q86UP2 1357 aaKnown RBP25.31■■□□□ 1.64
SMG1-203ENST00000532700 TNS1Q9HBL0 1735 aaKnown RBP25.3■■□□□ 1.64
SMG1-203ENST00000532700 ZBTB7CA1YPR0 619 aa25.29■■□□□ 1.64
SMG1-203ENST00000532700 DEFB132Q7Z7B7 95 aa25.29■■□□□ 1.64
SMG1-203ENST00000532700 USP35Q9P2H5 1018 aa25.29■■□□□ 1.64
SMG1-203ENST00000532700 ST20-MTHFSA0A0A6YYL1 179 aa25.28■■□□□ 1.64
SMG1-203ENST00000532700 SLC12A5Q9H2X9 1139 aa25.27■■□□□ 1.64
SMG1-203ENST00000532700 WNK3Q9BYP7 1800 aa25.27■■□□□ 1.64
SMG1-203ENST00000532700 ZNF692Q9BU19 519 aaPredicted RBP25.25■■□□□ 1.63
SMG1-203ENST00000532700 AXIN2Q9Y2T1 843 aa25.25■■□□□ 1.63
SMG1-203ENST00000532700 RGPD1P0DJD0 1748 aa25.25■■□□□ 1.63
SMG1-203ENST00000532700 PARP4Q9UKK3 1724 aaKnown RBP25.24■■□□□ 1.63
SMG1-203ENST00000532700 A0A1W2PP64 1363 aa25.24■■□□□ 1.63
SMG1-203ENST00000532700 AATKQ6ZMQ8 1374 aa25.24■■□□□ 1.63
SMG1-203ENST00000532700 SOX12O15370 315 aa25.24■■□□□ 1.63
SMG1-203ENST00000532700 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.24■■□□□ 1.63
SMG1-203ENST00000532700 PCGF6Q9BYE7 350 aa25.24■■□□□ 1.63
SMG1-203ENST00000532700 TTC21AQ8NDW8 1320 aa25.23■■□□□ 1.63
SMG1-203ENST00000532700 NME9Q86XW9 330 aa25.23■■□□□ 1.63
SMG1-203ENST00000532700 CCDC125Q86Z20 511 aa25.23■■□□□ 1.63
SMG1-203ENST00000532700 LTN1O94822 1766 aa25.23■■□□□ 1.63
SMG1-203ENST00000532700 EVA1CP58658 441 aa25.22■■□□□ 1.63
SMG1-203ENST00000532700 TMC1Q8TDI8 760 aa25.22■■□□□ 1.63
SMG1-203ENST00000532700 LRRC37A3O60309 1634 aa25.22■■□□□ 1.63
SMG1-203ENST00000532700 USP47Q96K76 1375 aa25.2■■□□□ 1.63
SMG1-203ENST00000532700 ARHGEF25Q86VW2 580 aa25.2■■□□□ 1.62
SMG1-203ENST00000532700 CRB1P82279 1406 aa25.2■■□□□ 1.62
SMG1-203ENST00000532700 BARGINQ6ZT62 677 aa25.19■■□□□ 1.62
SMG1-203ENST00000532700 USP31Q70CQ4 1352 aa25.18■■□□□ 1.62
SMG1-203ENST00000532700 TCP11L2Q8N4U5 519 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms