RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 EP400Q96L91 3159 aa22.21■■□□□ 1.15
DEPDC7-204ENST00000532078 UNC5CLQ8IV45 518 aa22.2■■□□□ 1.14
DEPDC7-204ENST00000532078 GJD4Q96KN9 370 aaPredicted RBP22.2■■□□□ 1.14
DEPDC7-204ENST00000532078 HIRIP3Q9BW71 556 aaPredicted RBP22.2■■□□□ 1.14
DEPDC7-204ENST00000532078 MINK1Q8N4C8 1332 aaPredicted RBP22.19■■□□□ 1.14
DEPDC7-204ENST00000532078 PLCH1Q4KWH8 1693 aa22.19■■□□□ 1.14
DEPDC7-204ENST00000532078 ARHGEF28Q8N1W1 1705 aaKnown RBP22.19■■□□□ 1.14
DEPDC7-204ENST00000532078 TRPM3Q9HCF6 1732 aaPredicted RBP22.18■■□□□ 1.14
DEPDC7-204ENST00000532078 NWD2Q9ULI1 1742 aa22.18■■□□□ 1.14
DEPDC7-204ENST00000532078 GLI3P10071 1580 aa22.18■■□□□ 1.14
DEPDC7-204ENST00000532078 RALGAPBQ86X10 1494 aa22.18■■□□□ 1.14
DEPDC7-204ENST00000532078 LMOD2Q6P5Q4 547 aa22.18■■□□□ 1.14
DEPDC7-204ENST00000532078 PMFBP1Q8TBY8 1022 aa22.18■■□□□ 1.14
DEPDC7-204ENST00000532078 GPRASP1Q5JY77 1395 aa22.16■■□□□ 1.14
DEPDC7-204ENST00000532078 CABLES1Q8TDN4 633 aa22.16■■□□□ 1.14
DEPDC7-204ENST00000532078 WASLO00401 505 aaPredicted RBP22.15■■□□□ 1.14
DEPDC7-204ENST00000532078 ITSN1Q15811 1721 aa22.14■■□□□ 1.14
DEPDC7-204ENST00000532078 ALS2Q96Q42 1657 aa22.14■■□□□ 1.14
DEPDC7-204ENST00000532078 PRR36Q9H6K5 1346 aa22.14■■□□□ 1.14
DEPDC7-204ENST00000532078 PLEKHG5O94827 1062 aa22.13■■□□□ 1.13
DEPDC7-204ENST00000532078 KIAA1210Q9ULL0 1709 aa22.13■■□□□ 1.13
DEPDC7-204ENST00000532078 ATP7BP35670 1465 aa22.1■■□□□ 1.13
DEPDC7-204ENST00000532078 VPS72Q15906 364 aa22.1■■□□□ 1.13
DEPDC7-204ENST00000532078 CCDC125Q86Z20 511 aa22.09■■□□□ 1.13
DEPDC7-204ENST00000532078 NGDNQ8NEJ9 315 aaKnown RBP22.08■■□□□ 1.13
DEPDC7-204ENST00000532078 COL14A1Q05707 1796 aaKnown RBP22.07■■□□□ 1.12
DEPDC7-204ENST00000532078 NRAPQ86VF7 1730 aa22.07■■□□□ 1.12
DEPDC7-204ENST00000532078 CRYBG1Q9Y4K1 1723 aa22.07■■□□□ 1.12
DEPDC7-204ENST00000532078 BRWD3Q6RI45 1802 aa22.07■■□□□ 1.12
DEPDC7-204ENST00000532078 CCDC9Q9Y3X0 531 aaKnown RBP22.06■■□□□ 1.12
DEPDC7-204ENST00000532078 TOPAZ1Q8N9V7 1692 aa22.05■■□□□ 1.12
DEPDC7-204ENST00000532078 FAM83GA6ND36 823 aa22.05■■□□□ 1.12
DEPDC7-204ENST00000532078 SEPT12Q8IYM1 358 aa22.04■■□□□ 1.12
DEPDC7-204ENST00000532078 NUDT16Q96DE0 195 aaKnown RBP22.04■■□□□ 1.12
DEPDC7-204ENST00000532078 BLMP54132 1417 aaPredicted RBP22.04■■□□□ 1.12
DEPDC7-204ENST00000532078 SPDYE2BA6NHP3 402 aa22.03■■□□□ 1.12
DEPDC7-204ENST00000532078 PAK3O75914 559 aaPredicted RBP22.03■■□□□ 1.12
DEPDC7-204ENST00000532078 SPDYE6P0CI01 402 aa22.03■■□□□ 1.12
DEPDC7-204ENST00000532078 SPDYE2Q495Y8 402 aa22.03■■□□□ 1.12
DEPDC7-204ENST00000532078 ONECUT3O60422 494 aaPredicted RBP22■■□□□ 1.11
DEPDC7-204ENST00000532078 CDK19Q9BWU1 502 aa22■■□□□ 1.11
DEPDC7-204ENST00000532078 BTG4Q9NY30 223 aa22■■□□□ 1.11
DEPDC7-204ENST00000532078 PHRF1Q9P1Y6 1649 aaKnown RBP21.99■■□□□ 1.11
DEPDC7-204ENST00000532078 ZRANB1Q9UGI0 708 aa21.99■■□□□ 1.11
DEPDC7-204ENST00000532078 SRCAPQ6ZRS2 3230 aa21.99■■□□□ 1.11
DEPDC7-204ENST00000532078 POLR3AO14802 1390 aaPredicted RBP21.99■■□□□ 1.11
DEPDC7-204ENST00000532078 A0A0G2JS52 829 aa21.97■■□□□ 1.11
DEPDC7-204ENST00000532078 MYT1Q01538 1121 aa21.97■■□□□ 1.11
DEPDC7-204ENST00000532078 KRT27Q7Z3Y8 459 aa21.97■■□□□ 1.11
DEPDC7-204ENST00000532078 PRDM11Q9NQV5 511 aa21.97■■□□□ 1.11
DEPDC7-204ENST00000532078 NBPF1Q3BBV0 1214 aa21.96■■□□□ 1.11
DEPDC7-204ENST00000532078 CCDC61Q9Y6R9 512 aa21.96■■□□□ 1.11
DEPDC7-204ENST00000532078 SF3B2Q13435 895 aaKnown RBP21.95■■□□□ 1.1
DEPDC7-204ENST00000532078 FAM98CQ17RN3 349 aaKnown RBP21.94■■□□□ 1.1
DEPDC7-204ENST00000532078 ACEP12821 1306 aa21.94■■□□□ 1.1
DEPDC7-204ENST00000532078 CENPJQ9HC77 1338 aaPredicted RBP21.94■■□□□ 1.1
DEPDC7-204ENST00000532078 QRICH2Q9H0J4 1663 aa21.94■■□□□ 1.1
DEPDC7-204ENST00000532078 PLEKHG3A1L390 1219 aa21.93■■□□□ 1.1
DEPDC7-204ENST00000532078 KIAA0232Q92628 1395 aa21.93■■□□□ 1.1
DEPDC7-204ENST00000532078 AKT1S1Q96B36 256 aa21.93■■□□□ 1.1
DEPDC7-204ENST00000532078 SPATA31A5Q5VU36 1347 aa21.92■■□□□ 1.1
DEPDC7-204ENST00000532078 SPATA31A7Q8IWB4 1347 aa21.92■■□□□ 1.1
DEPDC7-204ENST00000532078 THSD7AQ9UPZ6 1657 aa21.91■■□□□ 1.1
DEPDC7-204ENST00000532078 NBPF8Q3BBV2 869 aa21.91■■□□□ 1.1
DEPDC7-204ENST00000532078 NRKQ7Z2Y5 1582 aa21.91■■□□□ 1.1
DEPDC7-204ENST00000532078 PPIP5K1Q6PFW1 1433 aa21.9■■□□□ 1.1
DEPDC7-204ENST00000532078 SRPK2P78362 688 aaKnown RBP21.9■■□□□ 1.1
DEPDC7-204ENST00000532078 ZNF692Q9BU19 519 aaPredicted RBP21.89■■□□□ 1.09
DEPDC7-204ENST00000532078 NUTM2GQ5VZR2 741 aa21.88■■□□□ 1.09
DEPDC7-204ENST00000532078 DEFB132Q7Z7B7 95 aa21.88■■□□□ 1.09
DEPDC7-204ENST00000532078 TRPM1Q7Z4N2 1603 aa21.88■■□□□ 1.09
DEPDC7-204ENST00000532078 CHRNA2Q15822 529 aa21.87■■□□□ 1.09
DEPDC7-204ENST00000532078 L3MBTL2Q969R5 705 aa21.87■■□□□ 1.09
DEPDC7-204ENST00000532078 ZC3H6P61129 1189 aaKnown RBP21.86■■□□□ 1.09
DEPDC7-204ENST00000532078 ABTB2Q8N961 1025 aa21.86■■□□□ 1.09
DEPDC7-204ENST00000532078 RGPD1P0DJD0 1748 aa21.86■■□□□ 1.09
DEPDC7-204ENST00000532078 BRD4O60885 1362 aaPredicted RBP21.86■■□□□ 1.09
DEPDC7-204ENST00000532078 USP19O94966 1318 aa21.85■■□□□ 1.09
DEPDC7-204ENST00000532078 SPATA31A1Q5TZJ5 1347 aa21.84■■□□□ 1.09
DEPDC7-204ENST00000532078 CABP2Q9NPB3 220 aa21.84■■□□□ 1.09
DEPDC7-204ENST00000532078 CPDO75976 1380 aa21.84■■□□□ 1.09
DEPDC7-204ENST00000532078 BAG6P46379 1132 aa21.83■■□□□ 1.09
DEPDC7-204ENST00000532078 STRN4Q9NRL3 753 aa21.83■■□□□ 1.09
DEPDC7-204ENST00000532078 LMO7Q8WWI1 1683 aa21.82■■□□□ 1.08
DEPDC7-204ENST00000532078 SSH2Q76I76 1423 aa21.82■■□□□ 1.08
DEPDC7-204ENST00000532078 NLRP13Q86W25 1043 aa21.81■■□□□ 1.08
DEPDC7-204ENST00000532078 USP6P35125 1406 aa21.8■■□□□ 1.08
DEPDC7-204ENST00000532078 ROCK2O75116 1388 aaKnown RBP21.8■■□□□ 1.08
DEPDC7-204ENST00000532078 SIN3AQ96ST3 1273 aa21.8■■□□□ 1.08
DEPDC7-204ENST00000532078 SSUH2Q9Y2M2 353 aa21.8■■□□□ 1.08
DEPDC7-204ENST00000532078 EVC2Q86UK5 1308 aa21.8■■□□□ 1.08
DEPDC7-204ENST00000532078 CAMTA1Q9Y6Y1 1673 aa21.79■■□□□ 1.08
DEPDC7-204ENST00000532078 TNS1Q9HBL0 1735 aaKnown RBP21.78■■□□□ 1.08
DEPDC7-204ENST00000532078 EVA1CP58658 441 aa21.78■■□□□ 1.08
DEPDC7-204ENST00000532078 NEUROD1Q13562 356 aa21.77■■□□□ 1.08
DEPDC7-204ENST00000532078 FAM182BQ5T319 152 aa21.77■■□□□ 1.08
DEPDC7-204ENST00000532078 CABP1Q9NZU7 370 aa21.77■■□□□ 1.08
DEPDC7-204ENST00000532078 DISP2A7MBM2 1401 aa21.76■■□□□ 1.07
DEPDC7-204ENST00000532078 GCP02774 474 aa21.76■■□□□ 1.07
DEPDC7-204ENST00000532078 SLIT3O75094 1523 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms