RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 KCNH2Q12809 1159 aa8.21□□□□□ -1.1
ATM-217ENST00000531957 MTMR2Q13614 643 aa8.21□□□□□ -1.1
ATM-217ENST00000531957 DIXDC1Q155Q3 683 aa8.21□□□□□ -1.1
ATM-217ENST00000531957 LCE2CQ5TA81 110 aa8.21□□□□□ -1.1
ATM-217ENST00000531957 RSBN1LQ6PCB5 846 aaPredicted RBP8.21□□□□□ -1.1
ATM-217ENST00000531957 EVA1BQ9NVM1 165 aa8.21□□□□□ -1.1
ATM-217ENST00000531957 PCDHB15Q9Y5E8 787 aa8.21□□□□□ -1.1
ATM-217ENST00000531957 CSPP1Q1MSJ5 1256 aa8.2□□□□□ -1.1
ATM-217ENST00000531957 LINC01559Q495D7 138 aa8.2□□□□□ -1.1
ATM-217ENST00000531957 MPNDQ8N594 471 aa8.2□□□□□ -1.1
ATM-217ENST00000531957 ZNF511Q8NB15 262 aa8.2□□□□□ -1.1
ATM-217ENST00000531957 PRR7Q8TB68 274 aa8.2□□□□□ -1.1
ATM-217ENST00000531957 TLL2Q9Y6L7 1015 aa8.2□□□□□ -1.1
ATM-217ENST00000531957 GJA5P36382 358 aa8.19□□□□□ -1.1
ATM-217ENST00000531957 GPBP1L1Q9HC44 474 aaPredicted RBP8.19□□□□□ -1.1
ATM-217ENST00000531957 NNTQ13423 1086 aa8.18□□□□□ -1.1
ATM-217ENST00000531957 RIC3Q7Z5B4 369 aa8.18□□□□□ -1.1
ATM-217ENST00000531957 H3BM21 787 aa8.17□□□□□ -1.1
ATM-217ENST00000531957 SPTLC1O15269 473 aa8.17□□□□□ -1.1
ATM-217ENST00000531957 ADH1CP00326 375 aa8.17□□□□□ -1.1
ATM-217ENST00000531957 SCARF1Q14162 830 aa8.17□□□□□ -1.1
ATM-217ENST00000531957 MYSM1Q5VVJ2 828 aa8.17□□□□□ -1.1
ATM-217ENST00000531957 CABLES1Q8TDN4 633 aa8.17□□□□□ -1.1
ATM-217ENST00000531957 BAP1Q92560 729 aa8.17□□□□□ -1.1
ATM-217ENST00000531957 LIMD1Q9UGP4 676 aa8.17□□□□□ -1.1
ATM-217ENST00000531957 HRCP23327 699 aa8.16□□□□□ -1.1
ATM-217ENST00000531957 FAM174AQ8TBP5 190 aa8.16□□□□□ -1.1
ATM-217ENST00000531957 CFAP99D6REC4 459 aa8.15□□□□□ -1.1
ATM-217ENST00000531957 QPCTQ16769 361 aa8.15□□□□□ -1.1
ATM-217ENST00000531957 CTHP32929 405 aa8.14□□□□□ -1.11
ATM-217ENST00000531957 GMPRP36959 345 aa8.14□□□□□ -1.11
ATM-217ENST00000531957 MRPL14Q6P1L8 145 aaKnown RBP8.14□□□□□ -1.11
ATM-217ENST00000531957 ZSCAN1Q8NBB4 408 aa8.14□□□□□ -1.11
ATM-217ENST00000531957 ZFP42Q96MM3 310 aa8.14□□□□□ -1.11
ATM-217ENST00000531957 KDM4CQ9H3R0 1056 aa8.14□□□□□ -1.11
ATM-217ENST00000531957 ZBTB3Q9H5J0 574 aa8.14□□□□□ -1.11
ATM-217ENST00000531957 POLR3EQ9NVU0 708 aa8.13□□□□□ -1.11
ATM-217ENST00000531957 TIMP2P16035 220 aa8.12□□□□□ -1.11
ATM-217ENST00000531957 WDR4P57081 412 aaKnown RBP8.12□□□□□ -1.11
ATM-217ENST00000531957 LYPD8Q6UX82 237 aa8.12□□□□□ -1.11
ATM-217ENST00000531957 TSC1Q92574 1164 aa8.12□□□□□ -1.11
ATM-217ENST00000531957 NUTM2BA6NNL0 878 aaPredicted RBP8.11□□□□□ -1.11
ATM-217ENST00000531957 NUTM2EB1AL46 878 aaPredicted RBP8.11□□□□□ -1.11
ATM-217ENST00000531957 NUTM2DQ5VT03 806 aaPredicted RBP8.11□□□□□ -1.11
ATM-217ENST00000531957 NUTM2AQ8IVF1 878 aaPredicted RBP8.11□□□□□ -1.11
ATM-217ENST00000531957 FAM117AQ9C073 453 aa8.11□□□□□ -1.11
ATM-217ENST00000531957 CLK2P49760 499 aaKnown RBP8.1□□□□□ -1.11
ATM-217ENST00000531957 PRPF38BQ5VTL8 546 aaKnown RBP8.1□□□□□ -1.11
ATM-217ENST00000531957 PURBQ96QR8 312 aaKnown RBP8.1□□□□□ -1.11
ATM-217ENST00000531957 F12P00748 615 aaPredicted RBP8.09□□□□□ -1.11
ATM-217ENST00000531957 VEGFBP49765 207 aa8.09□□□□□ -1.11
ATM-217ENST00000531957 CDK15Q96Q40 435 aa8.09□□□□□ -1.11
ATM-217ENST00000531957 PER1O15534 1290 aaPredicted RBP8.08□□□□□ -1.12
ATM-217ENST00000531957 LILRB3O75022 631 aa8.08□□□□□ -1.12
ATM-217ENST00000531957 VSIG8P0DPA2 414 aa8.08□□□□□ -1.12
ATM-217ENST00000531957 NR5A1Q13285 461 aa8.08□□□□□ -1.12
ATM-217ENST00000531957 RTL5Q5HYW3 569 aaPredicted RBP8.08□□□□□ -1.12
ATM-217ENST00000531957 MAP10Q9P2G4 905 aa8.08□□□□□ -1.12
ATM-217ENST00000531957 ERBB4Q15303 1308 aa8.07□□□□□ -1.12
ATM-217ENST00000531957 UPP2O95045 317 aa8.07□□□□□ -1.12
ATM-217ENST00000531957 AGERQ15109 404 aa8.07□□□□□ -1.12
ATM-217ENST00000531957 BPHLQ86WA6 291 aaPredicted RBP8.07□□□□□ -1.12
ATM-217ENST00000531957 ARMC2Q8NEN0 867 aa8.07□□□□□ -1.12
ATM-217ENST00000531957 RSPH6AQ9H0K4 717 aa8.07□□□□□ -1.12
ATM-217ENST00000531957 ZIC2O95409 532 aaPredicted RBP8.06□□□□□ -1.12
ATM-217ENST00000531957 ARID5BQ14865 1188 aa8.06□□□□□ -1.12
ATM-217ENST00000531957 FBXO31Q5XUX0 539 aaPredicted RBP8.06□□□□□ -1.12
ATM-217ENST00000531957 FOXJ1Q92949 421 aa8.06□□□□□ -1.12
ATM-217ENST00000531957 KLF16Q9BXK1 252 aaPredicted RBP8.06□□□□□ -1.12
ATM-217ENST00000531957 MAN1A2O60476 641 aa8.05□□□□□ -1.12
ATM-217ENST00000531957 LORP23490 312 aaPredicted RBP8.05□□□□□ -1.12
ATM-217ENST00000531957 TUSC1Q2TAM9 212 aa8.05□□□□□ -1.12
ATM-217ENST00000531957 NBPF14Q5TI25 921 aa8.05□□□□□ -1.12
ATM-217ENST00000531957 PROCA1Q8NCQ7 364 aaPredicted RBP8.05□□□□□ -1.12
ATM-217ENST00000531957 DDRGK1Q96HY6 314 aa8.05□□□□□ -1.12
ATM-217ENST00000531957 ATP1B4Q9UN42 357 aaPredicted RBP8.05□□□□□ -1.12
ATM-217ENST00000531957 NEUROD2Q15784 382 aa8.04□□□□□ -1.12
ATM-217ENST00000531957 TPRNQ4KMQ1 711 aa8.04□□□□□ -1.12
ATM-217ENST00000531957 SH3D19Q5HYK7 790 aa8.03□□□□□ -1.12
ATM-217ENST00000531957 MEIOBQ8N635 442 aa8.03□□□□□ -1.12
ATM-217ENST00000531957 ITPKCQ96DU7 683 aa8.03□□□□□ -1.12
ATM-217ENST00000531957 ZFAND3Q9H8U3 227 aa8.03□□□□□ -1.12
ATM-217ENST00000531957 MAP4K5Q9Y4K4 846 aa8.03□□□□□ -1.12
ATM-217ENST00000531957 SKIV2LQ15477 1246 aaKnown RBP8.02□□□□□ -1.13
ATM-217ENST00000531957 C6orf118Q5T5N4 469 aa8.02□□□□□ -1.13
ATM-217ENST00000531957 LINC00528Q8N1L1 170 aa8.02□□□□□ -1.13
ATM-217ENST00000531957 HELBQ8NG08 1087 aaPredicted RBP8.02□□□□□ -1.13
ATM-217ENST00000531957 SOBPA7XYQ1 873 aa8.01□□□□□ -1.13
ATM-217ENST00000531957 NR3C2P08235 984 aa8.01□□□□□ -1.13
ATM-217ENST00000531957 FSHRP23945 695 aa8.01□□□□□ -1.13
ATM-217ENST00000531957 C1QTNF2Q9BXJ5 285 aa8.01□□□□□ -1.13
ATM-217ENST00000531957 BMP2P12643 396 aa8□□□□□ -1.13
ATM-217ENST00000531957 CTDSPL2Q05D32 466 aa8□□□□□ -1.13
ATM-217ENST00000531957 C4orf48Q5BLP8 95 aa7.99□□□□□ -1.13
ATM-217ENST00000531957 TRMT44Q8IYL2 757 aaKnown RBP7.99□□□□□ -1.13
ATM-217ENST00000531957 GPKOWQ92917 476 aaPredicted RBP eCLIP7.99□□□□□ -1.13
ATM-217ENST00000531957 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.99□□□□□ -1.13
ATM-217ENST00000531957 EMILIN1Q9Y6C2 1016 aa7.99□□□□□ -1.13
ATM-217ENST00000531957 GRM5P41594 1212 aa7.98□□□□□ -1.13
ATM-217ENST00000531957 BRPF1P55201 1214 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms