RNA–Protein interactions for RNA: ENST00000531579.5

NXF1-210, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-210ENST00000531579 AFF2P51816 1311 aa20.96■□□□□ 0.95
NXF1-210ENST00000531579 TOPAZ1Q8N9V7 1692 aa20.95■□□□□ 0.94
NXF1-210ENST00000531579 TMF1P82094 1093 aa20.94■□□□□ 0.94
NXF1-210ENST00000531579 CDCA8Q53HL2 280 aa20.94■□□□□ 0.94
NXF1-210ENST00000531579 CABLES1Q8TDN4 633 aa20.94■□□□□ 0.94
NXF1-210ENST00000531579 ABTB2Q8N961 1025 aa20.93■□□□□ 0.94
NXF1-210ENST00000531579 TRPM3Q9HCF6 1732 aaPredicted RBP20.92■□□□□ 0.94
NXF1-210ENST00000531579 NLRP13Q86W25 1043 aa20.91■□□□□ 0.94
NXF1-210ENST00000531579 TMC1Q8TDI8 760 aa20.91■□□□□ 0.94
NXF1-210ENST00000531579 QTRT2Q9H974 415 aaKnown RBP20.91■□□□□ 0.94
NXF1-210ENST00000531579 USP21Q9UK80 565 aa20.91■□□□□ 0.94
NXF1-210ENST00000531579 USP6P35125 1406 aa20.89■□□□□ 0.94
NXF1-210ENST00000531579 PLEKHG5O94827 1062 aa20.89■□□□□ 0.93
NXF1-210ENST00000531579 RXRBP28702 533 aa20.89■□□□□ 0.93
NXF1-210ENST00000531579 EIF4G2P78344 907 aaKnown RBP eCLIP20.89■□□□□ 0.93
NXF1-210ENST00000531579 HDGFL2Q7Z4V5 671 aaPredicted RBP20.89■□□□□ 0.93
NXF1-210ENST00000531579 SLC12A5Q9H2X9 1139 aa20.89■□□□□ 0.93
NXF1-210ENST00000531579 TERF2IPQ9NYB0 399 aa20.89■□□□□ 0.93
NXF1-210ENST00000531579 TRPC5Q9UL62 973 aaPredicted RBP20.88■□□□□ 0.93
NXF1-210ENST00000531579 ALS2Q96Q42 1657 aa20.88■□□□□ 0.93
NXF1-210ENST00000531579 CPSF1Q10570 1443 aaKnown RBP20.87■□□□□ 0.93
NXF1-210ENST00000531579 NINLQ9Y2I6 1382 aa20.87■□□□□ 0.93
NXF1-210ENST00000531579 TTC21AQ8NDW8 1320 aa20.86■□□□□ 0.93
NXF1-210ENST00000531579 SSH2Q76I76 1423 aa20.86■□□□□ 0.93
NXF1-210ENST00000531579 KTN1Q86UP2 1357 aaKnown RBP20.85■□□□□ 0.93
NXF1-210ENST00000531579 TTC21BQ7Z4L5 1316 aa20.85■□□□□ 0.93
NXF1-210ENST00000531579 FAM83GA6ND36 823 aa20.85■□□□□ 0.93
NXF1-210ENST00000531579 SOCS7O14512 581 aa20.85■□□□□ 0.93
NXF1-210ENST00000531579 NLRP6P59044 892 aa20.85■□□□□ 0.93
NXF1-210ENST00000531579 RBM6P78332 1123 aaKnown RBP20.85■□□□□ 0.93
NXF1-210ENST00000531579 NUTM2GQ5VZR2 741 aa20.85■□□□□ 0.93
NXF1-210ENST00000531579 UNC5CLQ8IV45 518 aa20.84■□□□□ 0.93
NXF1-210ENST00000531579 BCL9LQ86UU0 1499 aa20.81■□□□□ 0.92
NXF1-210ENST00000531579 GCP02774 474 aa20.81■□□□□ 0.92
NXF1-210ENST00000531579 SLIT2O94813 1529 aa20.81■□□□□ 0.92
NXF1-210ENST00000531579 MARF1Q9Y4F3 1742 aaKnown RBP20.81■□□□□ 0.92
NXF1-210ENST00000531579 USP19O94966 1318 aa20.8■□□□□ 0.92
NXF1-210ENST00000531579 PRDM11Q9NQV5 511 aa20.8■□□□□ 0.92
NXF1-210ENST00000531579 HSPA5P11021 654 aaKnown RBP20.79■□□□□ 0.92
NXF1-210ENST00000531579 KCNH5Q8NCM2 988 aa20.79■□□□□ 0.92
NXF1-210ENST00000531579 ZC3H6P61129 1189 aaKnown RBP20.78■□□□□ 0.92
NXF1-210ENST00000531579 GJD4Q96KN9 370 aaPredicted RBP20.78■□□□□ 0.92
NXF1-210ENST00000531579 CD163L1Q9NR16 1453 aa20.77■□□□□ 0.92
NXF1-210ENST00000531579 BTG4Q9NY30 223 aa20.77■□□□□ 0.92
NXF1-210ENST00000531579 ATRNO75882 1429 aa20.77■□□□□ 0.91
NXF1-210ENST00000531579 CDK12Q9NYV4 1490 aaPredicted RBP20.76■□□□□ 0.91
NXF1-210ENST00000531579 KIAA0232Q92628 1395 aa20.76■□□□□ 0.91
NXF1-210ENST00000531579 VPS72Q15906 364 aa20.76■□□□□ 0.91
NXF1-210ENST00000531579 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.76■□□□□ 0.91
NXF1-210ENST00000531579 AKAP12Q02952 1782 aa20.76■□□□□ 0.91
NXF1-210ENST00000531579 EDC4Q6P2E9 1401 aaKnown RBP20.76■□□□□ 0.91
NXF1-210ENST00000531579 A0A1W2PP64 1363 aa20.75■□□□□ 0.91
NXF1-210ENST00000531579 CPDO75976 1380 aa20.75■□□□□ 0.91
NXF1-210ENST00000531579 ABCA3Q99758 1704 aa20.75■□□□□ 0.91
NXF1-210ENST00000531579 ANKRD36BQ8N2N9 1353 aa20.74■□□□□ 0.91
NXF1-210ENST00000531579 USP31Q70CQ4 1352 aa20.73■□□□□ 0.91
NXF1-210ENST00000531579 CRYBG1Q9Y4K1 1723 aa20.72■□□□□ 0.91
NXF1-210ENST00000531579 COL14A1Q05707 1796 aaKnown RBP20.72■□□□□ 0.91
NXF1-210ENST00000531579 EVA1CP58658 441 aa20.71■□□□□ 0.91
NXF1-210ENST00000531579 CHRNA2Q15822 529 aa20.71■□□□□ 0.91
NXF1-210ENST00000531579 NME9Q86XW9 330 aa20.71■□□□□ 0.91
NXF1-210ENST00000531579 CCDC9Q9Y3X0 531 aaKnown RBP20.71■□□□□ 0.91
NXF1-210ENST00000531579 MON2Q7Z3U7 1717 aa20.7■□□□□ 0.9
NXF1-210ENST00000531579 NWD2Q9ULI1 1742 aa20.7■□□□□ 0.9
NXF1-210ENST00000531579 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.7■□□□□ 0.9
NXF1-210ENST00000531579 PHRF1Q9P1Y6 1649 aaKnown RBP20.69■□□□□ 0.9
NXF1-210ENST00000531579 ONECUT3O60422 494 aaPredicted RBP20.69■□□□□ 0.9
NXF1-210ENST00000531579 SLIT3O75094 1523 aa20.68■□□□□ 0.9
NXF1-210ENST00000531579 ARHGEF25Q86VW2 580 aa20.68■□□□□ 0.9
NXF1-210ENST00000531579 NRKQ7Z2Y5 1582 aa20.68■□□□□ 0.9
NXF1-210ENST00000531579 PIK3C2AO00443 1686 aa20.67■□□□□ 0.9
NXF1-210ENST00000531579 ZRANB1Q9UGI0 708 aa20.67■□□□□ 0.9
NXF1-210ENST00000531579 AATKQ6ZMQ8 1374 aa20.67■□□□□ 0.9
NXF1-210ENST00000531579 COG3Q96JB2 828 aa20.66■□□□□ 0.9
NXF1-210ENST00000531579 POLR3GLQ9BT43 218 aa20.66■□□□□ 0.9
NXF1-210ENST00000531579 PLCH1Q4KWH8 1693 aa20.65■□□□□ 0.9
NXF1-210ENST00000531579 STRN4Q9NRL3 753 aa20.65■□□□□ 0.9
NXF1-210ENST00000531579 SPATA31A5Q5VU36 1347 aa20.64■□□□□ 0.89
NXF1-210ENST00000531579 SPATA31A7Q8IWB4 1347 aa20.64■□□□□ 0.89
NXF1-210ENST00000531579 FYB1O15117 783 aa20.64■□□□□ 0.89
NXF1-210ENST00000531579 ZBTB7CA1YPR0 619 aa20.63■□□□□ 0.89
NXF1-210ENST00000531579 SOX12O15370 315 aa20.63■□□□□ 0.89
NXF1-210ENST00000531579 CARD14Q9BXL6 1004 aa20.63■□□□□ 0.89
NXF1-210ENST00000531579 RGS12O14924 1447 aa20.62■□□□□ 0.89
NXF1-210ENST00000531579 SPATA31A1Q5TZJ5 1347 aa20.61■□□□□ 0.89
NXF1-210ENST00000531579 C11orf95C9JLR9 678 aaPredicted RBP20.61■□□□□ 0.89
NXF1-210ENST00000531579 SEPT12Q8IYM1 358 aa20.61■□□□□ 0.89
NXF1-210ENST00000531579 CAMTA1Q9Y6Y1 1673 aa20.61■□□□□ 0.89
NXF1-210ENST00000531579 THRAP3Q9Y2W1 955 aaKnown RBP20.6■□□□□ 0.89
NXF1-210ENST00000531579 LARP1Q6PKG0 1096 aaKnown RBP20.59■□□□□ 0.89
NXF1-210ENST00000531579 AXIN2Q9Y2T1 843 aa20.59■□□□□ 0.89
NXF1-210ENST00000531579 OVOS2A0A0J9YW53 1432 aa20.59■□□□□ 0.89
NXF1-210ENST00000531579 OVOS2Q6IE36 1432 aa20.59■□□□□ 0.89
NXF1-210ENST00000531579 GLI3P10071 1580 aa20.59■□□□□ 0.89
NXF1-210ENST00000531579 NRAPQ86VF7 1730 aa20.58■□□□□ 0.89
NXF1-210ENST00000531579 FAM98CQ17RN3 349 aaKnown RBP20.58■□□□□ 0.89
NXF1-210ENST00000531579 GGNBP2Q9H3C7 697 aa20.58■□□□□ 0.89
NXF1-210ENST00000531579 PANK3Q9H999 370 aa20.58■□□□□ 0.89
NXF1-210ENST00000531579 USP54Q70EL1 1684 aa20.58■□□□□ 0.88
NXF1-210ENST00000531579 CGNL1Q0VF96 1302 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms