RNA–Protein interactions for RNA: ENST00000530628.2

CDKN2A-210, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN2A, Length 748 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-210ENST00000530628 BTG4Q9NY30 223 aa32.05■■■□□ 2.72
CDKN2A-210ENST00000530628 SF3B2Q13435 895 aaKnown RBP32.03■■■□□ 2.72
CDKN2A-210ENST00000530628 NUDT16Q96DE0 195 aaKnown RBP32.03■■■□□ 2.72
CDKN2A-210ENST00000530628 KRT27Q7Z3Y8 459 aa32.02■■■□□ 2.72
CDKN2A-210ENST00000530628 KIAA1210Q9ULL0 1709 aa32.02■■■□□ 2.72
CDKN2A-210ENST00000530628 CRYBG1Q9Y4K1 1723 aa32.01■■■□□ 2.72
CDKN2A-210ENST00000530628 A0A0G2JS52 829 aa32.01■■■□□ 2.71
CDKN2A-210ENST00000530628 MYT1Q01538 1121 aa32.01■■■□□ 2.71
CDKN2A-210ENST00000530628 ATP7BP35670 1465 aa32■■■□□ 2.71
CDKN2A-210ENST00000530628 CDK19Q9BWU1 502 aa31.99■■■□□ 2.71
CDKN2A-210ENST00000530628 FAM98CQ17RN3 349 aaKnown RBP31.96■■■□□ 2.71
CDKN2A-210ENST00000530628 DEFB132Q7Z7B7 95 aa31.95■■■□□ 2.71
CDKN2A-210ENST00000530628 PRDM11Q9NQV5 511 aa31.94■■■□□ 2.7
CDKN2A-210ENST00000530628 TOPAZ1Q8N9V7 1692 aa31.92■■■□□ 2.7
CDKN2A-210ENST00000530628 CCDC61Q9Y6R9 512 aa31.9■■■□□ 2.7
CDKN2A-210ENST00000530628 SPATA31A5Q5VU36 1347 aa31.9■■■□□ 2.7
CDKN2A-210ENST00000530628 SPATA31A7Q8IWB4 1347 aa31.9■■■□□ 2.7
CDKN2A-210ENST00000530628 PHRF1Q9P1Y6 1649 aaKnown RBP31.89■■■□□ 2.7
CDKN2A-210ENST00000530628 NBPF1Q3BBV0 1214 aa31.89■■■□□ 2.7
CDKN2A-210ENST00000530628 ACEP12821 1306 aa31.89■■■□□ 2.7
CDKN2A-210ENST00000530628 POLR3AO14802 1390 aaPredicted RBP31.88■■■□□ 2.69
CDKN2A-210ENST00000530628 NBPF8Q3BBV2 869 aa31.87■■■□□ 2.69
CDKN2A-210ENST00000530628 KIAA0232Q92628 1395 aa31.86■■■□□ 2.69
CDKN2A-210ENST00000530628 NUTM2GQ5VZR2 741 aa31.86■■■□□ 2.69
CDKN2A-210ENST00000530628 PLEKHG3A1L390 1219 aa31.85■■■□□ 2.69
CDKN2A-210ENST00000530628 BAG6P46379 1132 aa31.83■■■□□ 2.69
CDKN2A-210ENST00000530628 ZC3H6P61129 1189 aaKnown RBP31.83■■■□□ 2.69
CDKN2A-210ENST00000530628 CHRNA2Q15822 529 aa31.83■■■□□ 2.69
CDKN2A-210ENST00000530628 THSD7AQ9UPZ6 1657 aa31.81■■■□□ 2.68
CDKN2A-210ENST00000530628 SRPK2P78362 688 aaKnown RBP31.81■■■□□ 2.68
CDKN2A-210ENST00000530628 CENPJQ9HC77 1338 aaPredicted RBP31.8■■■□□ 2.68
CDKN2A-210ENST00000530628 ABTB2Q8N961 1025 aa31.8■■■□□ 2.68
CDKN2A-210ENST00000530628 STRN4Q9NRL3 753 aa31.8■■■□□ 2.68
CDKN2A-210ENST00000530628 RGPD1P0DJD0 1748 aa31.8■■■□□ 2.68
CDKN2A-210ENST00000530628 SPATA31A1Q5TZJ5 1347 aa31.78■■■□□ 2.68
CDKN2A-210ENST00000530628 FAM182BQ5T319 152 aa31.78■■■□□ 2.68
CDKN2A-210ENST00000530628 QRICH2Q9H0J4 1663 aa31.76■■■□□ 2.68
CDKN2A-210ENST00000530628 PPIP5K1Q6PFW1 1433 aa31.75■■■□□ 2.67
CDKN2A-210ENST00000530628 EVA1CP58658 441 aa31.75■■■□□ 2.67
CDKN2A-210ENST00000530628 CABP2Q9NPB3 220 aa31.74■■■□□ 2.67
CDKN2A-210ENST00000530628 NRKQ7Z2Y5 1582 aa31.73■■■□□ 2.67
CDKN2A-210ENST00000530628 NLRP13Q86W25 1043 aa31.72■■■□□ 2.67
CDKN2A-210ENST00000530628 SRCAPQ6ZRS2 3230 aa31.72■■■□□ 2.67
CDKN2A-210ENST00000530628 USP35Q9P2H5 1018 aa31.71■■■□□ 2.67
CDKN2A-210ENST00000530628 EN1Q05925 392 aaPredicted RBP31.7■■■□□ 2.67
CDKN2A-210ENST00000530628 L3MBTL2Q969R5 705 aa31.7■■■□□ 2.67
CDKN2A-210ENST00000530628 USP19O94966 1318 aa31.69■■■□□ 2.66
CDKN2A-210ENST00000530628 SSH2Q76I76 1423 aa31.68■■■□□ 2.66
CDKN2A-210ENST00000530628 BRD4O60885 1362 aaPredicted RBP31.68■■■□□ 2.66
CDKN2A-210ENST00000530628 CPDO75976 1380 aa31.68■■■□□ 2.66
CDKN2A-210ENST00000530628 CAMTA1Q9Y6Y1 1673 aa31.67■■■□□ 2.66
CDKN2A-210ENST00000530628 TNS1Q9HBL0 1735 aaKnown RBP31.67■■■□□ 2.66
CDKN2A-210ENST00000530628 FAM196AQ6ZSG2 479 aa31.66■■■□□ 2.66
CDKN2A-210ENST00000530628 LMO7Q8WWI1 1683 aa31.66■■■□□ 2.66
CDKN2A-210ENST00000530628 PSDA5PKW4 1024 aaPredicted RBP31.65■■■□□ 2.66
CDKN2A-210ENST00000530628 GCP02774 474 aa31.65■■■□□ 2.66
CDKN2A-210ENST00000530628 BARGINQ6ZT62 677 aa31.65■■■□□ 2.66
CDKN2A-210ENST00000530628 CABP1Q9NZU7 370 aa31.65■■■□□ 2.66
CDKN2A-210ENST00000530628 TRPM1Q7Z4N2 1603 aa31.64■■■□□ 2.65
CDKN2A-210ENST00000530628 LARP1Q6PKG0 1096 aaKnown RBP31.63■■■□□ 2.65
CDKN2A-210ENST00000530628 SIN3AQ96ST3 1273 aa31.63■■■□□ 2.65
CDKN2A-210ENST00000530628 DISP2A7MBM2 1401 aa31.62■■■□□ 2.65
CDKN2A-210ENST00000530628 LRP5O75197 1615 aa31.62■■■□□ 2.65
CDKN2A-210ENST00000530628 EVC2Q86UK5 1308 aa31.61■■■□□ 2.65
CDKN2A-210ENST00000530628 TRIM37O94972 964 aa31.61■■■□□ 2.65
CDKN2A-210ENST00000530628 PDE3BQ13370 1112 aa31.61■■■□□ 2.65
CDKN2A-210ENST00000530628 TCP11L2Q8N4U5 519 aa31.61■■■□□ 2.65
CDKN2A-210ENST00000530628 USP6P35125 1406 aa31.6■■■□□ 2.65
CDKN2A-210ENST00000530628 NLRP6P59044 892 aa31.59■■■□□ 2.65
CDKN2A-210ENST00000530628 NEUROD1Q13562 356 aa31.59■■■□□ 2.65
CDKN2A-210ENST00000530628 THRAP3Q9Y2W1 955 aaKnown RBP31.58■■■□□ 2.65
CDKN2A-210ENST00000530628 ZBTB7CA1YPR0 619 aa31.57■■■□□ 2.64
CDKN2A-210ENST00000530628 EZH2Q15910 746 aaKnown RBP31.57■■■□□ 2.64
CDKN2A-210ENST00000530628 ROCK2O75116 1388 aaKnown RBP31.56■■■□□ 2.64
CDKN2A-210ENST00000530628 COL5A2P05997 1499 aaPredicted RBP31.54■■■□□ 2.64
CDKN2A-210ENST00000530628 APBA3O96018 575 aa31.54■■■□□ 2.64
CDKN2A-210ENST00000530628 CAMKK2Q96RR4 588 aa31.53■■■□□ 2.64
CDKN2A-210ENST00000530628 R3HDM1Q15032 1099 aaKnown RBP31.52■■■□□ 2.64
CDKN2A-210ENST00000530628 SLIT3O75094 1523 aa31.52■■■□□ 2.64
CDKN2A-210ENST00000530628 PARP4Q9UKK3 1724 aaKnown RBP31.52■■■□□ 2.64
CDKN2A-210ENST00000530628 PIK3C2AO00443 1686 aa31.51■■■□□ 2.63
CDKN2A-210ENST00000530628 ZNF692Q9BU19 519 aaPredicted RBP31.5■■■□□ 2.63
CDKN2A-210ENST00000530628 CRB1P82279 1406 aa31.49■■■□□ 2.63
CDKN2A-210ENST00000530628 AKAP12Q02952 1782 aa31.49■■■□□ 2.63
CDKN2A-210ENST00000530628 AATKQ6ZMQ8 1374 aa31.49■■■□□ 2.63
CDKN2A-210ENST00000530628 PARD3Q8TEW0 1356 aa31.48■■■□□ 2.63
CDKN2A-210ENST00000530628 COL18A1P39060 1754 aa31.45■■■□□ 2.63
CDKN2A-210ENST00000530628 TTC21BQ7Z4L5 1316 aa31.44■■■□□ 2.62
CDKN2A-210ENST00000530628 C11orf95C9JLR9 678 aaPredicted RBP31.43■■■□□ 2.62
CDKN2A-210ENST00000530628 TOM1L2Q6ZVM7 507 aa31.43■■■□□ 2.62
CDKN2A-210ENST00000530628 RREB1Q92766 1687 aa31.43■■■□□ 2.62
CDKN2A-210ENST00000530628 KCNH5Q8NCM2 988 aa31.42■■■□□ 2.62
CDKN2A-210ENST00000530628 RGPD5Q99666 1765 aa31.41■■■□□ 2.62
CDKN2A-210ENST00000530628 TTC21AQ8NDW8 1320 aa31.41■■■□□ 2.62
CDKN2A-210ENST00000530628 NUP188Q5SRE5 1749 aa31.39■■■□□ 2.62
CDKN2A-210ENST00000530628 CPSF1Q10570 1443 aaKnown RBP31.39■■■□□ 2.62
CDKN2A-210ENST00000530628 DDB1Q16531 1140 aa31.38■■■□□ 2.61
CDKN2A-210ENST00000530628 AXIN2Q9Y2T1 843 aa31.38■■■□□ 2.61
CDKN2A-210ENST00000530628 WNK3Q9BYP7 1800 aa31.38■■■□□ 2.61
CDKN2A-210ENST00000530628 NBPF14Q5TI25 921 aa31.37■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms