RNA–Protein interactions for RNA: ENST00000530131.5

RDX-209, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 1,911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-209ENST00000530131 PMFBP1Q8TBY8 1022 aa20.45■□□□□ 0.86
RDX-209ENST00000530131 NCOA3Q9Y6Q9 1424 aa20.45■□□□□ 0.86
RDX-209ENST00000530131 COL3A1P02461 1466 aaPredicted RBP20.45■□□□□ 0.86
RDX-209ENST00000530131 OVOS2A0A0J9YW53 1432 aa20.43■□□□□ 0.86
RDX-209ENST00000530131 OVOS2Q6IE36 1432 aa20.43■□□□□ 0.86
RDX-209ENST00000530131 WDR43Q15061 677 aaKnown RBP eCLIP20.43■□□□□ 0.86
RDX-209ENST00000530131 ZRANB1Q9UGI0 708 aa20.43■□□□□ 0.86
RDX-209ENST00000530131 MAP2P11137 1827 aaKnown RBP20.43■□□□□ 0.86
RDX-209ENST00000530131 XIRP1Q702N8 1843 aaKnown RBP20.43■□□□□ 0.86
RDX-209ENST00000530131 TMEM94Q12767 1356 aa20.43■□□□□ 0.86
RDX-209ENST00000530131 SMG6Q86US8 1419 aaKnown RBP20.42■□□□□ 0.86
RDX-209ENST00000530131 PIK3C2AO00443 1686 aa20.41■□□□□ 0.86
RDX-209ENST00000530131 C14orf37Q86TY3 774 aa20.41■□□□□ 0.86
RDX-209ENST00000530131 NGDNQ8NEJ9 315 aaKnown RBP20.41■□□□□ 0.86
RDX-209ENST00000530131 AATKQ6ZMQ8 1374 aa20.41■□□□□ 0.86
RDX-209ENST00000530131 USP54Q70EL1 1684 aa20.41■□□□□ 0.86
RDX-209ENST00000530131 TTC21AQ8NDW8 1320 aa20.41■□□□□ 0.86
RDX-209ENST00000530131 DCCP43146 1447 aa20.4■□□□□ 0.86
RDX-209ENST00000530131 PNPLA6Q8IY17 1366 aa20.4■□□□□ 0.86
RDX-209ENST00000530131 COG3Q96JB2 828 aa20.39■□□□□ 0.86
RDX-209ENST00000530131 CFAP53Q96M91 514 aa20.39■□□□□ 0.86
RDX-209ENST00000530131 C19orf44Q9H6X5 657 aa20.39■□□□□ 0.86
RDX-209ENST00000530131 PHF8Q9UPP1 1060 aa20.39■□□□□ 0.86
RDX-209ENST00000530131 MARF1Q9Y4F3 1742 aaKnown RBP20.39■□□□□ 0.85
RDX-209ENST00000530131 USP31Q70CQ4 1352 aa20.37■□□□□ 0.85
RDX-209ENST00000530131 C1orf167Q5SNV9 1468 aa20.37■□□□□ 0.85
RDX-209ENST00000530131 POLKQ9UBT6 870 aa20.37■□□□□ 0.85
RDX-209ENST00000530131 KIF1AQ12756 1690 aa20.36■□□□□ 0.85
RDX-209ENST00000530131 SENP3-EIF4A1A0A087X0R7 540 aa20.36■□□□□ 0.85
RDX-209ENST00000530131 MST1RQ04912 1400 aa20.36■□□□□ 0.85
RDX-209ENST00000530131 FBLN1P23142 703 aa20.35■□□□□ 0.85
RDX-209ENST00000530131 CDK12Q9NYV4 1490 aaPredicted RBP20.35■□□□□ 0.85
RDX-209ENST00000530131 LRRC7Q96NW7 1537 aa20.35■□□□□ 0.85
RDX-209ENST00000530131 ESCO1Q5FWF5 840 aa20.33■□□□□ 0.85
RDX-209ENST00000530131 ZNF335Q9H4Z2 1342 aaPredicted RBP20.33■□□□□ 0.85
RDX-209ENST00000530131 ORAI2Q96SN7 254 aa20.32■□□□□ 0.84
RDX-209ENST00000530131 EMILIN1Q9Y6C2 1016 aa20.32■□□□□ 0.84
RDX-209ENST00000530131 GTF3C3Q9Y5Q9 886 aa20.31■□□□□ 0.84
RDX-209ENST00000530131 TRPM3Q9HCF6 1732 aaPredicted RBP20.31■□□□□ 0.84
RDX-209ENST00000530131 PEAK1Q9H792 1746 aa20.3■□□□□ 0.84
RDX-209ENST00000530131 CCDC146Q8IYE0 955 aa20.3■□□□□ 0.84
RDX-209ENST00000530131 IQSEC2Q5JU85 1478 aa20.3■□□□□ 0.84
RDX-209ENST00000530131 ATF3P18847 181 aa20.29■□□□□ 0.84
RDX-209ENST00000530131 MSH6P52701 1360 aa20.29■□□□□ 0.84
RDX-209ENST00000530131 RRS1Q15050 365 aaKnown RBP20.27■□□□□ 0.84
RDX-209ENST00000530131 DIAPH1O60610 1272 aaKnown RBP20.27■□□□□ 0.84
RDX-209ENST00000530131 CADPS2Q86UW7 1296 aa20.27■□□□□ 0.84
RDX-209ENST00000530131 DMRT2Q9Y5R5 561 aa20.27■□□□□ 0.84
RDX-209ENST00000530131 ZNF521Q96K83 1311 aa20.26■□□□□ 0.83
RDX-209ENST00000530131 NUDCQ9Y266 331 aa20.26■□□□□ 0.83
RDX-209ENST00000530131 SALL2Q9Y467 1007 aaPredicted RBP20.26■□□□□ 0.83
RDX-209ENST00000530131 APAF1O14727 1248 aa20.25■□□□□ 0.83
RDX-209ENST00000530131 PPM1GO15355 546 aaPredicted RBP20.25■□□□□ 0.83
RDX-209ENST00000530131 U2AF1L5P0DN76 240 aaPredicted RBP20.25■□□□□ 0.83
RDX-209ENST00000530131 U2AF1Q01081 240 aaKnown RBP eCLIP20.25■□□□□ 0.836e-6■■■■□ 22.1
RDX-209ENST00000530131 PSME1Q06323 249 aa20.25■□□□□ 0.83
RDX-209ENST00000530131 PDE3BQ13370 1112 aa20.25■□□□□ 0.83
RDX-209ENST00000530131 NLRP6P59044 892 aa20.24■□□□□ 0.83
RDX-209ENST00000530131 RUNDC1Q96C34 613 aa20.24■□□□□ 0.83
RDX-209ENST00000530131 FOXO3O43524 673 aa20.23■□□□□ 0.83
RDX-209ENST00000530131 ABTB2Q8N961 1025 aa20.23■□□□□ 0.83
RDX-209ENST00000530131 PAK3O75914 559 aaPredicted RBP20.23■□□□□ 0.83
RDX-209ENST00000530131 IL13P35225 146 aa20.23■□□□□ 0.83
RDX-209ENST00000530131 ALS2Q96Q42 1657 aa20.22■□□□□ 0.83
RDX-209ENST00000530131 NGEFQ8N5V2 710 aa20.22■□□□□ 0.83
RDX-209ENST00000530131 NFAT5O94916 1531 aa20.22■□□□□ 0.83
RDX-209ENST00000530131 U2SURPO15042 1029 aaKnown RBP20.21■□□□□ 0.83
RDX-209ENST00000530131 MAP3K19Q56UN5 1328 aa20.21■□□□□ 0.83
RDX-209ENST00000530131 NUTM2GQ5VZR2 741 aa20.21■□□□□ 0.83
RDX-209ENST00000530131 PLEKHF1Q96S99 279 aa20.21■□□□□ 0.83
RDX-209ENST00000530131 RGPD1P0DJD0 1748 aa20.2■□□□□ 0.82
RDX-209ENST00000530131 SBNO1A3KN83 1393 aa20.19■□□□□ 0.82
RDX-209ENST00000530131 SLIT3O75094 1523 aa20.19■□□□□ 0.82
RDX-209ENST00000530131 XPCQ01831 940 aaPredicted RBP20.19■□□□□ 0.82
RDX-209ENST00000530131 LTN1O94822 1766 aa20.18■□□□□ 0.82
RDX-209ENST00000530131 KRT28Q7Z3Y7 464 aa20.18■□□□□ 0.82
RDX-209ENST00000530131 TCP11L2Q8N4U5 519 aa20.18■□□□□ 0.82
RDX-209ENST00000530131 CDCA7LQ96GN5 454 aa20.18■□□□□ 0.82
RDX-209ENST00000530131 FLT4P35916 1363 aa20.18■□□□□ 0.82
RDX-209ENST00000530131 SOX12O15370 315 aa20.17■□□□□ 0.82
RDX-209ENST00000530131 PXDNQ92626 1479 aa20.17■□□□□ 0.82
RDX-209ENST00000530131 KIF24Q5T7B8 1368 aa20.17■□□□□ 0.82
RDX-209ENST00000530131 PHRF1Q9P1Y6 1649 aaKnown RBP20.17■□□□□ 0.82
RDX-209ENST00000530131 NCBP3Q53F19 620 aaKnown RBP20.17■□□□□ 0.82
RDX-209ENST00000530131 PHF23Q9BUL5 403 aaPredicted RBP20.17■□□□□ 0.82
RDX-209ENST00000530131 AEBP2Q6ZN18 517 aaPredicted RBP20.16■□□□□ 0.82
RDX-209ENST00000530131 RSPH6AQ9H0K4 717 aa20.16■□□□□ 0.82
RDX-209ENST00000530131 FCHSD2O94868 740 aa20.15■□□□□ 0.82
RDX-209ENST00000530131 EIF4A2Q14240 407 aaKnown RBP20.15■□□□□ 0.82
RDX-209ENST00000530131 USP19O94966 1318 aa20.15■□□□□ 0.82
RDX-209ENST00000530131 HSP90AB2PQ58FF8 381 aa20.15■□□□□ 0.82
RDX-209ENST00000530131 SUPT16HQ9Y5B9 1047 aaKnown RBP20.14■□□□□ 0.81
RDX-209ENST00000530131 LTBP4Q8N2S1 1624 aa20.14■□□□□ 0.81
RDX-209ENST00000530131 BRINP3Q76B58 766 aa20.14■□□□□ 0.81
RDX-209ENST00000530131 NPHP3Q7Z494 1330 aa20.13■□□□□ 0.81
RDX-209ENST00000530131 RTL1A6NKG5 1358 aa20.13■□□□□ 0.81
RDX-209ENST00000530131 CCDC27Q2M243 656 aa20.13■□□□□ 0.81
RDX-209ENST00000530131 GOLGA2Q08379 1002 aa20.12■□□□□ 0.81
RDX-209ENST00000530131 WWC1Q8IX03 1113 aa20.12■□□□□ 0.81
RDX-209ENST00000530131 DDX17Q92841 729 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms