RNA–Protein interactions for RNA: ENST00000529173.5

RPS3-212, Transcript of ribosomal protein S3, humanhuman

TSL 5

Gene RPS3, Length 1,373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-212ENST00000529173 XRN1Q8IZH2 1706 aaKnown RBP17.37■□□□□ 0.37
RPS3-212ENST00000529173 PNPLA6Q8IY17 1366 aa17.36■□□□□ 0.37
RPS3-212ENST00000529173 AATKQ6ZMQ8 1374 aa17.35■□□□□ 0.37
RPS3-212ENST00000529173 WDR63Q8IWG1 891 aa17.35■□□□□ 0.37
RPS3-212ENST00000529173 TRMT2AQ8IZ69 625 aaKnown RBP17.35■□□□□ 0.37
RPS3-212ENST00000529173 CCDC136Q96JN2 1154 aa17.35■□□□□ 0.37
RPS3-212ENST00000529173 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.34■□□□□ 0.37
RPS3-212ENST00000529173 CDK12Q9NYV4 1490 aaPredicted RBP17.34■□□□□ 0.37
RPS3-212ENST00000529173 SENP3-EIF4A1A0A087X0R7 540 aa17.33■□□□□ 0.36
RPS3-212ENST00000529173 U2AF1L5P0DN76 240 aaPredicted RBP17.33■□□□□ 0.36
RPS3-212ENST00000529173 U2AF1Q01081 240 aaKnown RBP eCLIP17.33■□□□□ 0.36
RPS3-212ENST00000529173 SETD1BQ9UPS6 1966 aaKnown RBP17.32■□□□□ 0.36
RPS3-212ENST00000529173 ANKARQ7Z5J8 1434 aa17.32■□□□□ 0.36
RPS3-212ENST00000529173 DIAPH1O60610 1272 aaKnown RBP17.32■□□□□ 0.36
RPS3-212ENST00000529173 NEFMP07197 916 aa17.32■□□□□ 0.36
RPS3-212ENST00000529173 MAPK8IP3Q9UPT6 1336 aa17.32■□□□□ 0.36
RPS3-212ENST00000529173 NRKQ7Z2Y5 1582 aa17.32■□□□□ 0.36
RPS3-212ENST00000529173 PTPRUQ92729 1446 aa17.32■□□□□ 0.36
RPS3-212ENST00000529173 PLEKHG3A1L390 1219 aa17.31■□□□□ 0.36
RPS3-212ENST00000529173 COG3Q96JB2 828 aa17.31■□□□□ 0.36
RPS3-212ENST00000529173 TSHZ2Q9NRE2 1034 aa17.31■□□□□ 0.36
RPS3-212ENST00000529173 WWC1Q8IX03 1113 aa17.3■□□□□ 0.36
RPS3-212ENST00000529173 TCP11L2Q8N4U5 519 aa17.3■□□□□ 0.36
RPS3-212ENST00000529173 PHF23Q9BUL5 403 aaPredicted RBP17.3■□□□□ 0.36
RPS3-212ENST00000529173 AMOTL2Q9Y2J4 779 aa17.3■□□□□ 0.36
RPS3-212ENST00000529173 MYH16Q9H6N6 1097 aa17.29■□□□□ 0.36
RPS3-212ENST00000529173 B4GALNT3Q6L9W6 998 aa17.28■□□□□ 0.36
RPS3-212ENST00000529173 ANKLE2Q86XL3 938 aa17.28■□□□□ 0.36
RPS3-212ENST00000529173 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.28■□□□□ 0.36
RPS3-212ENST00000529173 SLC26A8Q96RN1 970 aa17.28■□□□□ 0.36
RPS3-212ENST00000529173 CT47B1P0C2W7 299 aaPredicted RBP17.28■□□□□ 0.36
RPS3-212ENST00000529173 TTC21AQ8NDW8 1320 aa17.27■□□□□ 0.36
RPS3-212ENST00000529173 U2SURPO15042 1029 aaKnown RBP17.27■□□□□ 0.35
RPS3-212ENST00000529173 USP6P35125 1406 aa17.27■□□□□ 0.35
RPS3-212ENST00000529173 IL16Q14005 1332 aa17.26■□□□□ 0.35
RPS3-212ENST00000529173 PRR36Q9H6K5 1346 aa17.26■□□□□ 0.35
RPS3-212ENST00000529173 FCHSD2O94868 740 aa17.26■□□□□ 0.35
RPS3-212ENST00000529173 MAP2P11137 1827 aaKnown RBP17.25■□□□□ 0.35
RPS3-212ENST00000529173 LRRC7Q96NW7 1537 aa17.25■□□□□ 0.35
RPS3-212ENST00000529173 PLPPR3Q6T4P5 718 aa17.24■□□□□ 0.35
RPS3-212ENST00000529173 POLKQ9UBT6 870 aa17.24■□□□□ 0.35
RPS3-212ENST00000529173 NALCNQ8IZF0 1738 aa17.24■□□□□ 0.35
RPS3-212ENST00000529173 FMN2Q9NZ56 1722 aa17.23■□□□□ 0.35
RPS3-212ENST00000529173 CALD1Q05682 793 aaKnown RBP17.23■□□□□ 0.35
RPS3-212ENST00000529173 CHD2O14647 1828 aaKnown RBP17.23■□□□□ 0.35
RPS3-212ENST00000529173 OVOS2A0A0J9YW53 1432 aa17.22■□□□□ 0.35
RPS3-212ENST00000529173 OVOS2Q6IE36 1432 aa17.22■□□□□ 0.35
RPS3-212ENST00000529173 ACEP12821 1306 aa17.22■□□□□ 0.35
RPS3-212ENST00000529173 TTC21BQ7Z4L5 1316 aa17.22■□□□□ 0.35
RPS3-212ENST00000529173 AAMPQ13685 434 aa17.21■□□□□ 0.35
RPS3-212ENST00000529173 NME9Q86XW9 330 aa17.21■□□□□ 0.35
RPS3-212ENST00000529173 EXOC6Q8TAG9 804 aa17.21■□□□□ 0.35
RPS3-212ENST00000529173 PLEKHF1Q96S99 279 aa17.21■□□□□ 0.35
RPS3-212ENST00000529173 TMPOP42166 694 aaKnown RBP17.2■□□□□ 0.34
RPS3-212ENST00000529173 LMOD3Q0VAK6 560 aa17.19■□□□□ 0.34
RPS3-212ENST00000529173 PDE3AQ14432 1141 aa17.19■□□□□ 0.34
RPS3-212ENST00000529173 SSH2Q76I76 1423 aa17.19■□□□□ 0.34
RPS3-212ENST00000529173 USP31Q70CQ4 1352 aa17.19■□□□□ 0.34
RPS3-212ENST00000529173 NEUROD2Q15784 382 aa17.18■□□□□ 0.34
RPS3-212ENST00000529173 USP54Q70EL1 1684 aa17.18■□□□□ 0.34
RPS3-212ENST00000529173 NPHP4O75161 1426 aaPredicted RBP17.17■□□□□ 0.34
RPS3-212ENST00000529173 MS4A1P11836 297 aa17.17■□□□□ 0.34
RPS3-212ENST00000529173 RRP7AQ9Y3A4 280 aaKnown RBP17.17■□□□□ 0.34
RPS3-212ENST00000529173 CRBNQ96SW2 442 aa17.16■□□□□ 0.34
RPS3-212ENST00000529173 KIF24Q5T7B8 1368 aa17.16■□□□□ 0.34
RPS3-212ENST00000529173 PPM1GO15355 546 aaPredicted RBP17.15■□□□□ 0.34
RPS3-212ENST00000529173 KCNA6P17658 529 aa17.15■□□□□ 0.34
RPS3-212ENST00000529173 CANXP27824 592 aaKnown RBP17.15■□□□□ 0.34
RPS3-212ENST00000529173 NGDNQ8NEJ9 315 aaKnown RBP17.15■□□□□ 0.34
RPS3-212ENST00000529173 RSPH6AQ9H0K4 717 aa17.15■□□□□ 0.34
RPS3-212ENST00000529173 SPINK5Q9NQ38 1064 aaPredicted RBP17.15■□□□□ 0.34
RPS3-212ENST00000529173 NWD1Q149M9 1564 aa17.15■□□□□ 0.34
RPS3-212ENST00000529173 IL13P35225 146 aa17.15■□□□□ 0.34
RPS3-212ENST00000529173 ADGRL3Q9HAR2 1447 aa17.14■□□□□ 0.33
RPS3-212ENST00000529173 PLIN1O60240 522 aa17.14■□□□□ 0.33
RPS3-212ENST00000529173 ZNF428Q96B54 188 aa17.14■□□□□ 0.33
RPS3-212ENST00000529173 PRKAR2BP31323 418 aa17.13■□□□□ 0.33
RPS3-212ENST00000529173 RIPK4P57078 832 aa17.13■□□□□ 0.33
RPS3-212ENST00000529173 NFE2L2Q16236 605 aa17.13■□□□□ 0.33
RPS3-212ENST00000529173 EMILIN1Q9Y6C2 1016 aa17.13■□□□□ 0.33
RPS3-212ENST00000529173 NCKAP5LQ9HCH0 1330 aa17.12■□□□□ 0.33
RPS3-212ENST00000529173 CENPQQ7L2Z9 268 aaPredicted RBP17.12■□□□□ 0.33
RPS3-212ENST00000529173 DMRT2Q9Y5R5 561 aa17.12■□□□□ 0.33
RPS3-212ENST00000529173 TCERG1O14776 1098 aaKnown RBP17.11■□□□□ 0.33
RPS3-212ENST00000529173 RBM19Q9Y4C8 960 aaKnown RBP17.11■□□□□ 0.33
RPS3-212ENST00000529173 FANCIQ9NVI1 1328 aa17.11■□□□□ 0.33
RPS3-212ENST00000529173 SBNO1A3KN83 1393 aa17.1■□□□□ 0.33
RPS3-212ENST00000529173 RARSP54136 660 aaKnown RBP17.1■□□□□ 0.33
RPS3-212ENST00000529173 TRIM35Q9UPQ4 493 aa17.1■□□□□ 0.33
RPS3-212ENST00000529173 RGPD8O14715 1765 aaPredicted RBP17.1■□□□□ 0.33
RPS3-212ENST00000529173 PIK3C2AO00443 1686 aa17.1■□□□□ 0.33
RPS3-212ENST00000529173 ARHGEF10O15013 1369 aa17.09■□□□□ 0.33
RPS3-212ENST00000529173 FLT4P35916 1363 aa17.09■□□□□ 0.33
RPS3-212ENST00000529173 RGPD1P0DJD0 1748 aa17.07■□□□□ 0.32
RPS3-212ENST00000529173 RRS1Q15050 365 aaKnown RBP17.07■□□□□ 0.32
RPS3-212ENST00000529173 ZRANB1Q9UGI0 708 aa17.07■□□□□ 0.32
RPS3-212ENST00000529173 NUTM2FA1L443 756 aa17.06■□□□□ 0.32
RPS3-212ENST00000529173 BCAR3O75815 825 aa17.06■□□□□ 0.32
RPS3-212ENST00000529173 HAP1P54257 671 aaPredicted RBP17.06■□□□□ 0.32
RPS3-212ENST00000529173 GNAI1P63096 354 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms