RNA–Protein interactions for RNA: ENST00000528461.5

SEC16B-208, Transcript of SEC16 homolog B, endoplasmic reticulum export factor, humanhuman

TSL 1 (best)

Gene SEC16B, Length 3,277 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16B-208ENST00000528461 XRN1Q8IZH2 1706 aaKnown RBP17.83■□□□□ 0.44
SEC16B-208ENST00000528461 NRKQ7Z2Y5 1582 aa17.83■□□□□ 0.44
SEC16B-208ENST00000528461 EXOC6Q8TAG9 804 aa17.82■□□□□ 0.44
SEC16B-208ENST00000528461 CCDC61Q9Y6R9 512 aa17.82■□□□□ 0.44
SEC16B-208ENST00000528461 PLIN1O60240 522 aa17.82■□□□□ 0.44
SEC16B-208ENST00000528461 TCP11L2Q8N4U5 519 aa17.82■□□□□ 0.44
SEC16B-208ENST00000528461 EID1Q9Y6B2 187 aa17.82■□□□□ 0.44
SEC16B-208ENST00000528461 PLPPR3Q6T4P5 718 aa17.81■□□□□ 0.44
SEC16B-208ENST00000528461 THEMISQ8N1K5 641 aaPredicted RBP17.81■□□□□ 0.44
SEC16B-208ENST00000528461 PLEKHF1Q96S99 279 aa17.81■□□□□ 0.44
SEC16B-208ENST00000528461 PTCH1Q13635 1447 aa17.8■□□□□ 0.44
SEC16B-208ENST00000528461 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.8■□□□□ 0.44
SEC16B-208ENST00000528461 NKTRP30414 1462 aaKnown RBP17.8■□□□□ 0.44
SEC16B-208ENST00000528461 FBLN1P23142 703 aa17.8■□□□□ 0.44
SEC16B-208ENST00000528461 ZNF142P52746 1687 aaPredicted RBP17.8■□□□□ 0.44
SEC16B-208ENST00000528461 NCBP3Q53F19 620 aaKnown RBP17.79■□□□□ 0.44
SEC16B-208ENST00000528461 E9PSI1 815 aa17.79■□□□□ 0.44
SEC16B-208ENST00000528461 POLKQ9UBT6 870 aa17.78■□□□□ 0.44
SEC16B-208ENST00000528461 CCDC27Q2M243 656 aa17.78■□□□□ 0.44
SEC16B-208ENST00000528461 ZRANB1Q9UGI0 708 aa17.78■□□□□ 0.44
SEC16B-208ENST00000528461 AMOTL2Q9Y2J4 779 aa17.78■□□□□ 0.44
SEC16B-208ENST00000528461 RRP7AQ9Y3A4 280 aaKnown RBP17.78■□□□□ 0.44
SEC16B-208ENST00000528461 NME9Q86XW9 330 aa17.77■□□□□ 0.44
SEC16B-208ENST00000528461 C20orf194Q5TEA3 1177 aa17.77■□□□□ 0.43
SEC16B-208ENST00000528461 U2AF1L5P0DN76 240 aaPredicted RBP17.76■□□□□ 0.43
SEC16B-208ENST00000528461 U2AF1Q01081 240 aaKnown RBP eCLIP17.76■□□□□ 0.43
SEC16B-208ENST00000528461 RGPD8O14715 1765 aaPredicted RBP17.75■□□□□ 0.43
SEC16B-208ENST00000528461 PLEKHG3A1L390 1219 aa17.75■□□□□ 0.43
SEC16B-208ENST00000528461 AATKQ6ZMQ8 1374 aa17.75■□□□□ 0.43
SEC16B-208ENST00000528461 CCDC136Q96JN2 1154 aa17.74■□□□□ 0.43
SEC16B-208ENST00000528461 DNAJC5Q9H3Z4 198 aa17.74■□□□□ 0.43
SEC16B-208ENST00000528461 SSH2Q76I76 1423 aa17.74■□□□□ 0.43
SEC16B-208ENST00000528461 WDR63Q8IWG1 891 aa17.73■□□□□ 0.43
SEC16B-208ENST00000528461 NEUROD2Q15784 382 aa17.73■□□□□ 0.43
SEC16B-208ENST00000528461 CRBNQ96SW2 442 aa17.73■□□□□ 0.43
SEC16B-208ENST00000528461 ZNF692Q9BU19 519 aaPredicted RBP17.73■□□□□ 0.43
SEC16B-208ENST00000528461 NALCNQ8IZF0 1738 aa17.72■□□□□ 0.43
SEC16B-208ENST00000528461 RBM19Q9Y4C8 960 aaKnown RBP17.72■□□□□ 0.43
SEC16B-208ENST00000528461 CHD2O14647 1828 aaKnown RBP17.72■□□□□ 0.43
SEC16B-208ENST00000528461 DIAPH1O60610 1272 aaKnown RBP17.71■□□□□ 0.43
SEC16B-208ENST00000528461 LRRC7Q96NW7 1537 aa17.71■□□□□ 0.43
SEC16B-208ENST00000528461 CDK12Q9NYV4 1490 aaPredicted RBP17.71■□□□□ 0.43
SEC16B-208ENST00000528461 ACEP12821 1306 aa17.71■□□□□ 0.43
SEC16B-208ENST00000528461 EMILIN1Q9Y6C2 1016 aa17.71■□□□□ 0.42
SEC16B-208ENST00000528461 USP6P35125 1406 aa17.71■□□□□ 0.42
SEC16B-208ENST00000528461 TRIM35Q9UPQ4 493 aa17.7■□□□□ 0.42
SEC16B-208ENST00000528461 PIK3R4Q99570 1358 aa17.7■□□□□ 0.42
SEC16B-208ENST00000528461 U2SURPO15042 1029 aaKnown RBP17.7■□□□□ 0.42
SEC16B-208ENST00000528461 SETD1BQ9UPS6 1966 aaKnown RBP17.7■□□□□ 0.42
SEC16B-208ENST00000528461 OVOS2A0A0J9YW53 1432 aa17.7■□□□□ 0.42
SEC16B-208ENST00000528461 OVOS2Q6IE36 1432 aa17.7■□□□□ 0.42
SEC16B-208ENST00000528461 BCAR3O75815 825 aa17.69■□□□□ 0.42
SEC16B-208ENST00000528461 TMPOP42166 694 aaKnown RBP17.69■□□□□ 0.42
SEC16B-208ENST00000528461 TTC21BQ7Z4L5 1316 aa17.69■□□□□ 0.42
SEC16B-208ENST00000528461 KCNA6P17658 529 aa17.68■□□□□ 0.42
SEC16B-208ENST00000528461 NUTM2FA1L443 756 aa17.68■□□□□ 0.42
SEC16B-208ENST00000528461 IL13P35225 146 aa17.67■□□□□ 0.42
SEC16B-208ENST00000528461 RSPH6AQ9H0K4 717 aa17.67■□□□□ 0.42
SEC16B-208ENST00000528461 FMN2Q9NZ56 1722 aa17.67■□□□□ 0.42
SEC16B-208ENST00000528461 PEAK1Q9H792 1746 aa17.66■□□□□ 0.42
SEC16B-208ENST00000528461 COG3Q96JB2 828 aa17.66■□□□□ 0.42
SEC16B-208ENST00000528461 FCHSD2O94868 740 aa17.65■□□□□ 0.42
SEC16B-208ENST00000528461 RRS1Q15050 365 aaKnown RBP17.64■□□□□ 0.41
SEC16B-208ENST00000528461 USP31Q70CQ4 1352 aa17.64■□□□□ 0.41
SEC16B-208ENST00000528461 MARF1Q9Y4F3 1742 aaKnown RBP17.64■□□□□ 0.41
SEC16B-208ENST00000528461 PPM1GO15355 546 aaPredicted RBP17.63■□□□□ 0.41
SEC16B-208ENST00000528461 PIK3C2AO00443 1686 aa17.62■□□□□ 0.41
SEC16B-208ENST00000528461 ANKARQ7Z5J8 1434 aa17.62■□□□□ 0.41
SEC16B-208ENST00000528461 RARSP54136 660 aaKnown RBP17.62■□□□□ 0.41
SEC16B-208ENST00000528461 ANKLE2Q86XL3 938 aa17.62■□□□□ 0.41
SEC16B-208ENST00000528461 PHACTR3Q96KR7 559 aa17.62■□□□□ 0.41
SEC16B-208ENST00000528461 RGPD1P0DJD0 1748 aa17.61■□□□□ 0.41
SEC16B-208ENST00000528461 DLG5Q8TDM6 1919 aa17.6■□□□□ 0.41
SEC16B-208ENST00000528461 PRKAR2BP31323 418 aa17.6■□□□□ 0.41
SEC16B-208ENST00000528461 PMFBP1Q8TBY8 1022 aa17.6■□□□□ 0.41
SEC16B-208ENST00000528461 KDM2BQ8NHM5 1336 aa17.6■□□□□ 0.41
SEC16B-208ENST00000528461 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.6■□□□□ 0.41
SEC16B-208ENST00000528461 FANCIQ9NVI1 1328 aa17.6■□□□□ 0.41
SEC16B-208ENST00000528461 USP54Q70EL1 1684 aa17.59■□□□□ 0.41
SEC16B-208ENST00000528461 RIPK4P57078 832 aa17.59■□□□□ 0.41
SEC16B-208ENST00000528461 IL16Q14005 1332 aa17.59■□□□□ 0.41
SEC16B-208ENST00000528461 MAPK8IP3Q9UPT6 1336 aa17.59■□□□□ 0.41
SEC16B-208ENST00000528461 HMOX1P09601 288 aa17.58■□□□□ 0.41
SEC16B-208ENST00000528461 MYH16Q9H6N6 1097 aa17.58■□□□□ 0.41
SEC16B-208ENST00000528461 PNNQ9H307 717 aaKnown RBP17.58■□□□□ 0.4
SEC16B-208ENST00000528461 TSR2Q969E8 191 aaKnown RBP17.57■□□□□ 0.4
SEC16B-208ENST00000528461 TTC21AQ8NDW8 1320 aa17.57■□□□□ 0.4
SEC16B-208ENST00000528461 PDE3AQ14432 1141 aa17.57■□□□□ 0.4
SEC16B-208ENST00000528461 EIF4A2Q14240 407 aaKnown RBP17.55■□□□□ 0.4
SEC16B-208ENST00000528461 NFE2L2Q16236 605 aa17.55■□□□□ 0.4
SEC16B-208ENST00000528461 NPHP4O75161 1426 aaPredicted RBP17.55■□□□□ 0.4
SEC16B-208ENST00000528461 TNNQ9UQP3 1299 aa17.54■□□□□ 0.4
SEC16B-208ENST00000528461 EXOSC9Q06265 439 aaKnown RBP17.53■□□□□ 0.4
SEC16B-208ENST00000528461 NWD1Q149M9 1564 aa17.53■□□□□ 0.4
SEC16B-208ENST00000528461 CT47B1P0C2W7 299 aaPredicted RBP17.52■□□□□ 0.4
SEC16B-208ENST00000528461 RLBP1P12271 317 aa17.52■□□□□ 0.4
SEC16B-208ENST00000528461 HSP90AB2PQ58FF8 381 aa17.52■□□□□ 0.4
SEC16B-208ENST00000528461 NGDNQ8NEJ9 315 aaKnown RBP17.52■□□□□ 0.4
SEC16B-208ENST00000528461 PANK1Q8TE04 598 aa17.52■□□□□ 0.4
SEC16B-208ENST00000528461 RBM33Q96EV2 1170 aaKnown RBP17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms