RNA–Protein interactions for RNA: ENST00000527921.1

CHD7-207, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 4

Gene CHD7, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-207ENST00000527921 TOPAZ1Q8N9V7 1692 aa17.57■□□□□ 0.4
CHD7-207ENST00000527921 NUDT16Q96DE0 195 aaKnown RBP17.56■□□□□ 0.4
CHD7-207ENST00000527921 NGDNQ8NEJ9 315 aaKnown RBP17.55■□□□□ 0.4
CHD7-207ENST00000527921 BTG4Q9NY30 223 aa17.55■□□□□ 0.4
CHD7-207ENST00000527921 POLR3AO14802 1390 aaPredicted RBP17.54■□□□□ 0.4
CHD7-207ENST00000527921 NBPF1Q3BBV0 1214 aa17.54■□□□□ 0.4
CHD7-207ENST00000527921 CDK19Q9BWU1 502 aa17.54■□□□□ 0.4
CHD7-207ENST00000527921 PHRF1Q9P1Y6 1649 aaKnown RBP17.52■□□□□ 0.4
CHD7-207ENST00000527921 KRT27Q7Z3Y8 459 aa17.52■□□□□ 0.4
CHD7-207ENST00000527921 ZRANB1Q9UGI0 708 aa17.52■□□□□ 0.4
CHD7-207ENST00000527921 CCDC9Q9Y3X0 531 aaKnown RBP17.52■□□□□ 0.4
CHD7-207ENST00000527921 PAK3O75914 559 aaPredicted RBP17.51■□□□□ 0.39
CHD7-207ENST00000527921 DEFB132Q7Z7B7 95 aa17.51■□□□□ 0.39
CHD7-207ENST00000527921 SPATA31A5Q5VU36 1347 aa17.5■□□□□ 0.39
CHD7-207ENST00000527921 SPATA31A7Q8IWB4 1347 aa17.5■□□□□ 0.39
CHD7-207ENST00000527921 PLEKHG3A1L390 1219 aa17.5■□□□□ 0.39
CHD7-207ENST00000527921 FAM98CQ17RN3 349 aaKnown RBP17.5■□□□□ 0.39
CHD7-207ENST00000527921 THSD7AQ9UPZ6 1657 aa17.5■□□□□ 0.39
CHD7-207ENST00000527921 ACEP12821 1306 aa17.49■□□□□ 0.39
CHD7-207ENST00000527921 CCDC61Q9Y6R9 512 aa17.49■□□□□ 0.39
CHD7-207ENST00000527921 NBPF8Q3BBV2 869 aa17.48■□□□□ 0.39
CHD7-207ENST00000527921 KIAA0232Q92628 1395 aa17.48■□□□□ 0.39
CHD7-207ENST00000527921 PRDM11Q9NQV5 511 aa17.47■□□□□ 0.39
CHD7-207ENST00000527921 NRKQ7Z2Y5 1582 aa17.45■□□□□ 0.38
CHD7-207ENST00000527921 CHRNA2Q15822 529 aa17.45■□□□□ 0.38
CHD7-207ENST00000527921 NUTM2GQ5VZR2 741 aa17.45■□□□□ 0.38
CHD7-207ENST00000527921 SPATA31A1Q5TZJ5 1347 aa17.45■□□□□ 0.38
CHD7-207ENST00000527921 USP19O94966 1318 aa17.44■□□□□ 0.38
CHD7-207ENST00000527921 CENPJQ9HC77 1338 aaPredicted RBP17.44■□□□□ 0.38
CHD7-207ENST00000527921 LMO7Q8WWI1 1683 aa17.43■□□□□ 0.38
CHD7-207ENST00000527921 QRICH2Q9H0J4 1663 aa17.43■□□□□ 0.38
CHD7-207ENST00000527921 ZC3H6P61129 1189 aaKnown RBP17.43■□□□□ 0.38
CHD7-207ENST00000527921 L3MBTL2Q969R5 705 aa17.43■□□□□ 0.38
CHD7-207ENST00000527921 PPIP5K1Q6PFW1 1433 aa17.42■□□□□ 0.38
CHD7-207ENST00000527921 A0A0G2JS52 829 aa17.42■□□□□ 0.38
CHD7-207ENST00000527921 MYT1Q01538 1121 aa17.42■□□□□ 0.38
CHD7-207ENST00000527921 SF3B2Q13435 895 aaKnown RBP17.42■□□□□ 0.38
CHD7-207ENST00000527921 FAM182BQ5T319 152 aa17.42■□□□□ 0.38
CHD7-207ENST00000527921 CAMTA1Q9Y6Y1 1673 aa17.42■□□□□ 0.38
CHD7-207ENST00000527921 CPDO75976 1380 aa17.41■□□□□ 0.38
CHD7-207ENST00000527921 CABP2Q9NPB3 220 aa17.41■□□□□ 0.38
CHD7-207ENST00000527921 RGPD1P0DJD0 1748 aa17.41■□□□□ 0.38
CHD7-207ENST00000527921 TNS1Q9HBL0 1735 aaKnown RBP17.41■□□□□ 0.38
CHD7-207ENST00000527921 TRPM1Q7Z4N2 1603 aa17.4■□□□□ 0.38
CHD7-207ENST00000527921 ABTB2Q8N961 1025 aa17.4■□□□□ 0.38
CHD7-207ENST00000527921 SSH2Q76I76 1423 aa17.39■□□□□ 0.38
CHD7-207ENST00000527921 SRPK2P78362 688 aaKnown RBP17.39■□□□□ 0.37
CHD7-207ENST00000527921 DISP2A7MBM2 1401 aa17.38■□□□□ 0.37
CHD7-207ENST00000527921 SIN3AQ96ST3 1273 aa17.38■□□□□ 0.37
CHD7-207ENST00000527921 STRN4Q9NRL3 753 aa17.38■□□□□ 0.37
CHD7-207ENST00000527921 BRD4O60885 1362 aaPredicted RBP17.38■□□□□ 0.37
CHD7-207ENST00000527921 GCP02774 474 aa17.37■□□□□ 0.37
CHD7-207ENST00000527921 BAG6P46379 1132 aa17.37■□□□□ 0.37
CHD7-207ENST00000527921 USP6P35125 1406 aa17.37■□□□□ 0.37
CHD7-207ENST00000527921 LARP1Q6PKG0 1096 aaKnown RBP17.36■□□□□ 0.37
CHD7-207ENST00000527921 BARGINQ6ZT62 677 aa17.36■□□□□ 0.37
CHD7-207ENST00000527921 CABP1Q9NZU7 370 aa17.36■□□□□ 0.37
CHD7-207ENST00000527921 LRP5O75197 1615 aa17.36■□□□□ 0.37
CHD7-207ENST00000527921 EN1Q05925 392 aaPredicted RBP17.35■□□□□ 0.37
CHD7-207ENST00000527921 SLIT3O75094 1523 aa17.35■□□□□ 0.37
CHD7-207ENST00000527921 PIK3C2AO00443 1686 aa17.34■□□□□ 0.37
CHD7-207ENST00000527921 COL5A2P05997 1499 aaPredicted RBP17.34■□□□□ 0.37
CHD7-207ENST00000527921 NLRP13Q86W25 1043 aa17.34■□□□□ 0.37
CHD7-207ENST00000527921 USP35Q9P2H5 1018 aa17.33■□□□□ 0.36
CHD7-207ENST00000527921 EVA1CP58658 441 aa17.32■□□□□ 0.36
CHD7-207ENST00000527921 FAM196AQ6ZSG2 479 aa17.32■□□□□ 0.36
CHD7-207ENST00000527921 COL18A1P39060 1754 aa17.31■□□□□ 0.36
CHD7-207ENST00000527921 PSDA5PKW4 1024 aaPredicted RBP17.31■□□□□ 0.36
CHD7-207ENST00000527921 TCP11L2Q8N4U5 519 aa17.31■□□□□ 0.36
CHD7-207ENST00000527921 CAMKK2Q96RR4 588 aa17.31■□□□□ 0.36
CHD7-207ENST00000527921 PARP4Q9UKK3 1724 aaKnown RBP17.3■□□□□ 0.36
CHD7-207ENST00000527921 EVC2Q86UK5 1308 aa17.3■□□□□ 0.36
CHD7-207ENST00000527921 TRIM37O94972 964 aa17.3■□□□□ 0.36
CHD7-207ENST00000527921 EZH2Q15910 746 aaKnown RBP17.3■□□□□ 0.36
CHD7-207ENST00000527921 THRAP3Q9Y2W1 955 aaKnown RBP17.3■□□□□ 0.36
CHD7-207ENST00000527921 AKAP12Q02952 1782 aa17.3■□□□□ 0.36
CHD7-207ENST00000527921 ROCK2O75116 1388 aaKnown RBP17.29■□□□□ 0.36
CHD7-207ENST00000527921 AATKQ6ZMQ8 1374 aa17.29■□□□□ 0.36
CHD7-207ENST00000527921 NEUROD1Q13562 356 aa17.29■□□□□ 0.36
CHD7-207ENST00000527921 NLRP6P59044 892 aa17.28■□□□□ 0.36
CHD7-207ENST00000527921 CRB1P82279 1406 aa17.28■□□□□ 0.36
CHD7-207ENST00000527921 RREB1Q92766 1687 aa17.27■□□□□ 0.36
CHD7-207ENST00000527921 CPSF1Q10570 1443 aaKnown RBP17.27■□□□□ 0.35
CHD7-207ENST00000527921 PEAK1Q9H792 1746 aa17.27■□□□□ 0.35
CHD7-207ENST00000527921 PDE3BQ13370 1112 aa17.26■□□□□ 0.35
CHD7-207ENST00000527921 AXIN2Q9Y2T1 843 aa17.26■□□□□ 0.35
CHD7-207ENST00000527921 TTC21BQ7Z4L5 1316 aa17.25■□□□□ 0.35
CHD7-207ENST00000527921 PARD3Q8TEW0 1356 aa17.25■□□□□ 0.35
CHD7-207ENST00000527921 APBA3O96018 575 aa17.24■□□□□ 0.35
CHD7-207ENST00000527921 R3HDM1Q15032 1099 aaKnown RBP17.24■□□□□ 0.35
CHD7-207ENST00000527921 ZNF692Q9BU19 519 aaPredicted RBP17.24■□□□□ 0.35
CHD7-207ENST00000527921 LRRC37A3O60309 1634 aa17.24■□□□□ 0.35
CHD7-207ENST00000527921 SBNO2Q9Y2G9 1366 aa17.24■□□□□ 0.35
CHD7-207ENST00000527921 NUP188Q5SRE5 1749 aa17.24■□□□□ 0.35
CHD7-207ENST00000527921 NFAT5O94916 1531 aa17.23■□□□□ 0.35
CHD7-207ENST00000527921 ARHGEF25Q86VW2 580 aa17.23■□□□□ 0.35
CHD7-207ENST00000527921 MON2Q7Z3U7 1717 aa17.22■□□□□ 0.35
CHD7-207ENST00000527921 WNK3Q9BYP7 1800 aa17.22■□□□□ 0.35
CHD7-207ENST00000527921 CD163L1Q9NR16 1453 aa17.22■□□□□ 0.35
CHD7-207ENST00000527921 RGPD5Q99666 1765 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms