RNA–Protein interactions for RNA: ENST00000527900.1

CHD7-206, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-206ENST00000527900 NRAPQ86VF7 1730 aa12.35□□□□□ -0.43
CHD7-206ENST00000527900 PLEKHG3A1L390 1219 aa12.35□□□□□ -0.43
CHD7-206ENST00000527900 LMOD2Q6P5Q4 547 aa12.35□□□□□ -0.43
CHD7-206ENST00000527900 NGDNQ8NEJ9 315 aaKnown RBP12.35□□□□□ -0.43
CHD7-206ENST00000527900 L3MBTL2Q969R5 705 aa12.34□□□□□ -0.43
CHD7-206ENST00000527900 HAP1P54257 671 aaPredicted RBP12.33□□□□□ -0.44
CHD7-206ENST00000527900 CCDC125Q86Z20 511 aa12.33□□□□□ -0.44
CHD7-206ENST00000527900 SIN3AQ96ST3 1273 aa12.33□□□□□ -0.44
CHD7-206ENST00000527900 CCDC61Q9Y6R9 512 aa12.33□□□□□ -0.44
CHD7-206ENST00000527900 COL14A1Q05707 1796 aaKnown RBP12.33□□□□□ -0.44
CHD7-206ENST00000527900 PLEKHG5O94827 1062 aa12.32□□□□□ -0.44
CHD7-206ENST00000527900 NBPF8Q3BBV2 869 aa12.32□□□□□ -0.44
CHD7-206ENST00000527900 ACEP12821 1306 aa12.32□□□□□ -0.44
CHD7-206ENST00000527900 SEPT12Q8IYM1 358 aa12.31□□□□□ -0.44
CHD7-206ENST00000527900 BTG4Q9NY30 223 aa12.31□□□□□ -0.44
CHD7-206ENST00000527900 TRPM1Q7Z4N2 1603 aa12.3□□□□□ -0.44
CHD7-206ENST00000527900 PAK3O75914 559 aaPredicted RBP12.3□□□□□ -0.44
CHD7-206ENST00000527900 CENPJQ9HC77 1338 aaPredicted RBP12.3□□□□□ -0.44
CHD7-206ENST00000527900 PHRF1Q9P1Y6 1649 aaKnown RBP12.29□□□□□ -0.44
CHD7-206ENST00000527900 SRCAPQ6ZRS2 3230 aa12.29□□□□□ -0.44
CHD7-206ENST00000527900 QRICH2Q9H0J4 1663 aa12.29□□□□□ -0.44
CHD7-206ENST00000527900 SPATA31A5Q5VU36 1347 aa12.28□□□□□ -0.44
CHD7-206ENST00000527900 SPATA31A7Q8IWB4 1347 aa12.28□□□□□ -0.44
CHD7-206ENST00000527900 BLMP54132 1417 aaPredicted RBP12.28□□□□□ -0.44
CHD7-206ENST00000527900 CABP2Q9NPB3 220 aa12.27□□□□□ -0.45
CHD7-206ENST00000527900 KIAA0232Q92628 1395 aa12.27□□□□□ -0.45
CHD7-206ENST00000527900 PPIP5K1Q6PFW1 1433 aa12.27□□□□□ -0.45
CHD7-206ENST00000527900 KRT27Q7Z3Y8 459 aa12.26□□□□□ -0.45
CHD7-206ENST00000527900 PRDM11Q9NQV5 511 aa12.26□□□□□ -0.45
CHD7-206ENST00000527900 CCDC9Q9Y3X0 531 aaKnown RBP12.26□□□□□ -0.45
CHD7-206ENST00000527900 USP19O94966 1318 aa12.26□□□□□ -0.45
CHD7-206ENST00000527900 THSD7AQ9UPZ6 1657 aa12.26□□□□□ -0.45
CHD7-206ENST00000527900 SRPK2P78362 688 aaKnown RBP12.25□□□□□ -0.45
CHD7-206ENST00000527900 FAM98CQ17RN3 349 aaKnown RBP12.25□□□□□ -0.45
CHD7-206ENST00000527900 NUTM2GQ5VZR2 741 aa12.25□□□□□ -0.45
CHD7-206ENST00000527900 BRD4O60885 1362 aaPredicted RBP12.25□□□□□ -0.45
CHD7-206ENST00000527900 SSH2Q76I76 1423 aa12.25□□□□□ -0.45
CHD7-206ENST00000527900 NRKQ7Z2Y5 1582 aa12.25□□□□□ -0.45
CHD7-206ENST00000527900 CPDO75976 1380 aa12.24□□□□□ -0.45
CHD7-206ENST00000527900 ZC3H6P61129 1189 aaKnown RBP12.24□□□□□ -0.45
CHD7-206ENST00000527900 NEUROD1Q13562 356 aa12.24□□□□□ -0.45
CHD7-206ENST00000527900 CHRNA2Q15822 529 aa12.24□□□□□ -0.45
CHD7-206ENST00000527900 SPATA31A1Q5TZJ5 1347 aa12.24□□□□□ -0.45
CHD7-206ENST00000527900 ABTB2Q8N961 1025 aa12.24□□□□□ -0.45
CHD7-206ENST00000527900 LMO7Q8WWI1 1683 aa12.24□□□□□ -0.45
CHD7-206ENST00000527900 CABP1Q9NZU7 370 aa12.24□□□□□ -0.45
CHD7-206ENST00000527900 CAMTA1Q9Y6Y1 1673 aa12.23□□□□□ -0.45
CHD7-206ENST00000527900 USP6P35125 1406 aa12.22□□□□□ -0.45
CHD7-206ENST00000527900 EVC2Q86UK5 1308 aa12.22□□□□□ -0.45
CHD7-206ENST00000527900 GCP02774 474 aa12.22□□□□□ -0.45
CHD7-206ENST00000527900 DEFB132Q7Z7B7 95 aa12.22□□□□□ -0.45
CHD7-206ENST00000527900 NLRP13Q86W25 1043 aa12.22□□□□□ -0.45
CHD7-206ENST00000527900 ROCK2O75116 1388 aaKnown RBP12.21□□□□□ -0.45
CHD7-206ENST00000527900 ZRANB1Q9UGI0 708 aa12.21□□□□□ -0.45
CHD7-206ENST00000527900 BARGINQ6ZT62 677 aa12.2□□□□□ -0.46
CHD7-206ENST00000527900 SLIT3O75094 1523 aa12.2□□□□□ -0.46
CHD7-206ENST00000527900 AKAP12Q02952 1782 aa12.2□□□□□ -0.46
CHD7-206ENST00000527900 PIK3C2AO00443 1686 aa12.19□□□□□ -0.46
CHD7-206ENST00000527900 FAM182BQ5T319 152 aa12.19□□□□□ -0.46
CHD7-206ENST00000527900 COL18A1P39060 1754 aa12.19□□□□□ -0.46
CHD7-206ENST00000527900 CPSF1Q10570 1443 aaKnown RBP12.19□□□□□ -0.46
CHD7-206ENST00000527900 SBNO2Q9Y2G9 1366 aa12.18□□□□□ -0.46
CHD7-206ENST00000527900 LARP1Q6PKG0 1096 aaKnown RBP12.18□□□□□ -0.46
CHD7-206ENST00000527900 ZNF692Q9BU19 519 aaPredicted RBP12.18□□□□□ -0.46
CHD7-206ENST00000527900 STRN4Q9NRL3 753 aa12.18□□□□□ -0.46
CHD7-206ENST00000527900 RGPD1P0DJD0 1748 aa12.17□□□□□ -0.46
CHD7-206ENST00000527900 NLRP6P59044 892 aa12.17□□□□□ -0.46
CHD7-206ENST00000527900 SF3B2Q13435 895 aaKnown RBP12.17□□□□□ -0.46
CHD7-206ENST00000527900 DISP2A7MBM2 1401 aa12.17□□□□□ -0.46
CHD7-206ENST00000527900 TNS1Q9HBL0 1735 aaKnown RBP12.17□□□□□ -0.46
CHD7-206ENST00000527900 AATKQ6ZMQ8 1374 aa12.17□□□□□ -0.46
CHD7-206ENST00000527900 TTC21BQ7Z4L5 1316 aa12.16□□□□□ -0.46
CHD7-206ENST00000527900 COL5A2P05997 1499 aaPredicted RBP12.16□□□□□ -0.46
CHD7-206ENST00000527900 A0A0G2JS52 829 aa12.16□□□□□ -0.46
CHD7-206ENST00000527900 EVA1CP58658 441 aa12.16□□□□□ -0.46
CHD7-206ENST00000527900 MYT1Q01538 1121 aa12.16□□□□□ -0.46
CHD7-206ENST00000527900 TCP11L2Q8N4U5 519 aa12.15□□□□□ -0.46
CHD7-206ENST00000527900 THRAP3Q9Y2W1 955 aaKnown RBP12.15□□□□□ -0.46
CHD7-206ENST00000527900 TTC21AQ8NDW8 1320 aa12.14□□□□□ -0.47
CHD7-206ENST00000527900 BAG6P46379 1132 aa12.14□□□□□ -0.47
CHD7-206ENST00000527900 FAM196AQ6ZSG2 479 aa12.14□□□□□ -0.47
CHD7-206ENST00000527900 ARHGEF25Q86VW2 580 aa12.14□□□□□ -0.47
CHD7-206ENST00000527900 CARD11Q9BXL7 1154 aa12.14□□□□□ -0.47
CHD7-206ENST00000527900 USP35Q9P2H5 1018 aa12.14□□□□□ -0.47
CHD7-206ENST00000527900 AXIN2Q9Y2T1 843 aa12.14□□□□□ -0.47
CHD7-206ENST00000527900 MON2Q7Z3U7 1717 aa12.14□□□□□ -0.47
CHD7-206ENST00000527900 PARP4Q9UKK3 1724 aaKnown RBP12.14□□□□□ -0.47
CHD7-206ENST00000527900 CD163L1Q9NR16 1453 aa12.14□□□□□ -0.47
CHD7-206ENST00000527900 EN1Q05925 392 aaPredicted RBP12.13□□□□□ -0.47
CHD7-206ENST00000527900 USP54Q70EL1 1684 aa12.13□□□□□ -0.47
CHD7-206ENST00000527900 RGPD5Q99666 1765 aa12.13□□□□□ -0.47
CHD7-206ENST00000527900 CRB1P82279 1406 aa12.12□□□□□ -0.47
CHD7-206ENST00000527900 PUS7Q96PZ0 661 aaKnown RBP12.12□□□□□ -0.47
CHD7-206ENST00000527900 CAMKK2Q96RR4 588 aa12.12□□□□□ -0.47
CHD7-206ENST00000527900 NFAT5O94916 1531 aa12.11□□□□□ -0.47
CHD7-206ENST00000527900 USP31Q70CQ4 1352 aa12.11□□□□□ -0.47
CHD7-206ENST00000527900 KTN1Q86UP2 1357 aaKnown RBP12.11□□□□□ -0.47
CHD7-206ENST00000527900 TONSLQ96HA7 1378 aa12.11□□□□□ -0.47
CHD7-206ENST00000527900 TRIM26Q12899 539 aaPredicted RBP12.11□□□□□ -0.47
CHD7-206ENST00000527900 PEAK1Q9H792 1746 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms