RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 BLMP54132 1417 aaPredicted RBP18.27■□□□□ 0.52
TOP1MT-217ENST00000523417 KRT27Q7Z3Y8 459 aa18.27■□□□□ 0.52
TOP1MT-217ENST00000523417 L3MBTL2Q969R5 705 aa18.27■□□□□ 0.52
TOP1MT-217ENST00000523417 ZRANB1Q9UGI0 708 aa18.27■□□□□ 0.52
TOP1MT-217ENST00000523417 PLEKHG5O94827 1062 aa18.26■□□□□ 0.51
TOP1MT-217ENST00000523417 CCDC9Q9Y3X0 531 aaKnown RBP18.26■□□□□ 0.51
TOP1MT-217ENST00000523417 SPATA31A5Q5VU36 1347 aa18.25■□□□□ 0.51
TOP1MT-217ENST00000523417 SPATA31A7Q8IWB4 1347 aa18.25■□□□□ 0.51
TOP1MT-217ENST00000523417 CENPJQ9HC77 1338 aaPredicted RBP18.25■□□□□ 0.51
TOP1MT-217ENST00000523417 BRD4O60885 1362 aaPredicted RBP18.25■□□□□ 0.51
TOP1MT-217ENST00000523417 PRDM11Q9NQV5 511 aa18.24■□□□□ 0.51
TOP1MT-217ENST00000523417 ABCA3Q99758 1704 aa18.23■□□□□ 0.51
TOP1MT-217ENST00000523417 FAM98CQ17RN3 349 aaKnown RBP18.22■□□□□ 0.51
TOP1MT-217ENST00000523417 COL14A1Q05707 1796 aaKnown RBP18.22■□□□□ 0.51
TOP1MT-217ENST00000523417 PLCH1Q4KWH8 1693 aa18.22■□□□□ 0.51
TOP1MT-217ENST00000523417 KIAA0232Q92628 1395 aa18.2■□□□□ 0.5
TOP1MT-217ENST00000523417 SRPK2P78362 688 aaKnown RBP18.2■□□□□ 0.5
TOP1MT-217ENST00000523417 SF3B2Q13435 895 aaKnown RBP18.2■□□□□ 0.5
TOP1MT-217ENST00000523417 ABTB2Q8N961 1025 aa18.2■□□□□ 0.5
TOP1MT-217ENST00000523417 SIN3AQ96ST3 1273 aa18.2■□□□□ 0.5
TOP1MT-217ENST00000523417 ITSN1Q15811 1721 aa18.19■□□□□ 0.5
TOP1MT-217ENST00000523417 NLRP13Q86W25 1043 aa18.19■□□□□ 0.5
TOP1MT-217ENST00000523417 USP19O94966 1318 aa18.19■□□□□ 0.5
TOP1MT-217ENST00000523417 SPATA31A1Q5TZJ5 1347 aa18.19■□□□□ 0.5
TOP1MT-217ENST00000523417 CPDO75976 1380 aa18.18■□□□□ 0.5
TOP1MT-217ENST00000523417 EP400Q96L91 3159 aa18.18■□□□□ 0.5
TOP1MT-217ENST00000523417 CABP2Q9NPB3 220 aa18.18■□□□□ 0.5
TOP1MT-217ENST00000523417 ZC3H6P61129 1189 aaKnown RBP18.17■□□□□ 0.5
TOP1MT-217ENST00000523417 DEFB132Q7Z7B7 95 aa18.17■□□□□ 0.5
TOP1MT-217ENST00000523417 CABP1Q9NZU7 370 aa18.17■□□□□ 0.5
TOP1MT-217ENST00000523417 NRAPQ86VF7 1730 aa18.17■□□□□ 0.5
TOP1MT-217ENST00000523417 CRYBG1Q9Y4K1 1723 aa18.17■□□□□ 0.5
TOP1MT-217ENST00000523417 PPIP5K1Q6PFW1 1433 aa18.16■□□□□ 0.5
TOP1MT-217ENST00000523417 GCP02774 474 aa18.16■□□□□ 0.5
TOP1MT-217ENST00000523417 CHRNA2Q15822 529 aa18.16■□□□□ 0.5
TOP1MT-217ENST00000523417 NUTM2GQ5VZR2 741 aa18.16■□□□□ 0.5
TOP1MT-217ENST00000523417 BARGINQ6ZT62 677 aa18.16■□□□□ 0.5
TOP1MT-217ENST00000523417 BRWD3Q6RI45 1802 aa18.16■□□□□ 0.5
TOP1MT-217ENST00000523417 TOPAZ1Q8N9V7 1692 aa18.15■□□□□ 0.5
TOP1MT-217ENST00000523417 ZNF692Q9BU19 519 aaPredicted RBP18.15■□□□□ 0.5
TOP1MT-217ENST00000523417 EVC2Q86UK5 1308 aa18.15■□□□□ 0.5
TOP1MT-217ENST00000523417 A0A0G2JS52 829 aa18.13■□□□□ 0.49
TOP1MT-217ENST00000523417 BAG6P46379 1132 aa18.13■□□□□ 0.49
TOP1MT-217ENST00000523417 EVA1CP58658 441 aa18.13■□□□□ 0.49
TOP1MT-217ENST00000523417 MYT1Q01538 1121 aa18.13■□□□□ 0.49
TOP1MT-217ENST00000523417 NEUROD1Q13562 356 aa18.13■□□□□ 0.49
TOP1MT-217ENST00000523417 SSH2Q76I76 1423 aa18.13■□□□□ 0.49
TOP1MT-217ENST00000523417 THRAP3Q9Y2W1 955 aaKnown RBP18.12■□□□□ 0.49
TOP1MT-217ENST00000523417 FAM196AQ6ZSG2 479 aa18.11■□□□□ 0.49
TOP1MT-217ENST00000523417 STRN4Q9NRL3 753 aa18.11■□□□□ 0.49
TOP1MT-217ENST00000523417 USP6P35125 1406 aa18.1■□□□□ 0.49
TOP1MT-217ENST00000523417 ROCK2O75116 1388 aaKnown RBP18.1■□□□□ 0.49
TOP1MT-217ENST00000523417 NLRP6P59044 892 aa18.09■□□□□ 0.49
TOP1MT-217ENST00000523417 TCP11L2Q8N4U5 519 aa18.09■□□□□ 0.49
TOP1MT-217ENST00000523417 THSD7AQ9UPZ6 1657 aa18.09■□□□□ 0.49
TOP1MT-217ENST00000523417 CAMTA1Q9Y6Y1 1673 aa18.09■□□□□ 0.49
TOP1MT-217ENST00000523417 DISP2A7MBM2 1401 aa18.08■□□□□ 0.49
TOP1MT-217ENST00000523417 AATKQ6ZMQ8 1374 aa18.08■□□□□ 0.49
TOP1MT-217ENST00000523417 LARP1Q6PKG0 1096 aaKnown RBP18.08■□□□□ 0.48
TOP1MT-217ENST00000523417 PHRF1Q9P1Y6 1649 aaKnown RBP18.07■□□□□ 0.48
TOP1MT-217ENST00000523417 SBNO2Q9Y2G9 1366 aa18.06■□□□□ 0.48
TOP1MT-217ENST00000523417 FAM182BQ5T319 152 aa18.06■□□□□ 0.48
TOP1MT-217ENST00000523417 TRPM1Q7Z4N2 1603 aa18.05■□□□□ 0.48
TOP1MT-217ENST00000523417 TTC21BQ7Z4L5 1316 aa18.05■□□□□ 0.48
TOP1MT-217ENST00000523417 C11orf95C9JLR9 678 aaPredicted RBP18.05■□□□□ 0.48
TOP1MT-217ENST00000523417 EN1Q05925 392 aaPredicted RBP18.05■□□□□ 0.48
TOP1MT-217ENST00000523417 NRKQ7Z2Y5 1582 aa18.04■□□□□ 0.48
TOP1MT-217ENST00000523417 TTC21AQ8NDW8 1320 aa18.04■□□□□ 0.48
TOP1MT-217ENST00000523417 PDE3BQ13370 1112 aa18.04■□□□□ 0.48
TOP1MT-217ENST00000523417 KCNH5Q8NCM2 988 aa18.04■□□□□ 0.48
TOP1MT-217ENST00000523417 PUS7Q96PZ0 661 aaKnown RBP18.04■□□□□ 0.48
TOP1MT-217ENST00000523417 CAMKK2Q96RR4 588 aa18.04■□□□□ 0.48
TOP1MT-217ENST00000523417 CPSF1Q10570 1443 aaKnown RBP18.04■□□□□ 0.48
TOP1MT-217ENST00000523417 LMO7Q8WWI1 1683 aa18.03■□□□□ 0.48
TOP1MT-217ENST00000523417 QRICH2Q9H0J4 1663 aa18.03■□□□□ 0.48
TOP1MT-217ENST00000523417 ARHGEF25Q86VW2 580 aa18.03■□□□□ 0.48
TOP1MT-217ENST00000523417 USP35Q9P2H5 1018 aa18.03■□□□□ 0.48
TOP1MT-217ENST00000523417 SRCAPQ6ZRS2 3230 aa18.02■□□□□ 0.48
TOP1MT-217ENST00000523417 SLIT3O75094 1523 aa18.02■□□□□ 0.47
TOP1MT-217ENST00000523417 COL5A2P05997 1499 aaPredicted RBP18.01■□□□□ 0.47
TOP1MT-217ENST00000523417 CRB1P82279 1406 aa18■□□□□ 0.47
TOP1MT-217ENST00000523417 TRIM37O94972 964 aa18■□□□□ 0.47
TOP1MT-217ENST00000523417 CARD11Q9BXL7 1154 aa18■□□□□ 0.47
TOP1MT-217ENST00000523417 AXIN2Q9Y2T1 843 aa18■□□□□ 0.47
TOP1MT-217ENST00000523417 PARD3Q8TEW0 1356 aa18■□□□□ 0.47
TOP1MT-217ENST00000523417 APBA3O96018 575 aa17.98■□□□□ 0.47
TOP1MT-217ENST00000523417 EZH2Q15910 746 aaKnown RBP17.98■□□□□ 0.47
TOP1MT-217ENST00000523417 CDCA7Q9BWT1 371 aaPredicted RBP17.98■□□□□ 0.47
TOP1MT-217ENST00000523417 USP31Q70CQ4 1352 aa17.97■□□□□ 0.47
TOP1MT-217ENST00000523417 KTN1Q86UP2 1357 aaKnown RBP17.97■□□□□ 0.47
TOP1MT-217ENST00000523417 SLC24A1O60721 1099 aa17.97■□□□□ 0.47
TOP1MT-217ENST00000523417 WDR17Q8IZU2 1322 aa17.97■□□□□ 0.47
TOP1MT-217ENST00000523417 RGPD1P0DJD0 1748 aa17.96■□□□□ 0.47
TOP1MT-217ENST00000523417 TOM1L2Q6ZVM7 507 aa17.95■□□□□ 0.46
TOP1MT-217ENST00000523417 CARD10Q9BWT7 1032 aa17.95■□□□□ 0.46
TOP1MT-217ENST00000523417 TONSLQ96HA7 1378 aa17.94■□□□□ 0.46
TOP1MT-217ENST00000523417 PSDA5PKW4 1024 aaPredicted RBP17.94■□□□□ 0.46
TOP1MT-217ENST00000523417 DDB1Q16531 1140 aa17.93■□□□□ 0.46
TOP1MT-217ENST00000523417 COL18A1P39060 1754 aa17.93■□□□□ 0.46
TOP1MT-217ENST00000523417 PIK3C2AO00443 1686 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms