RNA–Protein interactions for RNA: ENST00000523147.5

PTP4A3-205, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5

Gene PTP4A3, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-205ENST00000523147 PLEKHG3A1L390 1219 aa29.93■■■□□ 2.38
PTP4A3-205ENST00000523147 NBPF8Q3BBV2 869 aa29.93■■■□□ 2.38
PTP4A3-205ENST00000523147 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.93■■■□□ 2.38
PTP4A3-205ENST00000523147 TOPAZ1Q8N9V7 1692 aa29.91■■■□□ 2.38
PTP4A3-205ENST00000523147 POLR3AO14802 1390 aaPredicted RBP29.91■■■□□ 2.38
PTP4A3-205ENST00000523147 FAM83GA6ND36 823 aa29.9■■■□□ 2.38
PTP4A3-205ENST00000523147 CCDC9Q9Y3X0 531 aaKnown RBP29.9■■■□□ 2.38
PTP4A3-205ENST00000523147 PPIP5K1Q6PFW1 1433 aa29.89■■■□□ 2.38
PTP4A3-205ENST00000523147 EVC2Q86UK5 1308 aa29.89■■■□□ 2.38
PTP4A3-205ENST00000523147 PLCH1Q4KWH8 1693 aa29.88■■■□□ 2.37
PTP4A3-205ENST00000523147 NWD2Q9ULI1 1742 aa29.86■■■□□ 2.37
PTP4A3-205ENST00000523147 NUTM2GQ5VZR2 741 aa29.86■■■□□ 2.37
PTP4A3-205ENST00000523147 ATAD2Q6PL18 1390 aa29.86■■■□□ 2.37
PTP4A3-205ENST00000523147 RALGAPBQ86X10 1494 aa29.86■■■□□ 2.37
PTP4A3-205ENST00000523147 VPS72Q15906 364 aa29.85■■■□□ 2.37
PTP4A3-205ENST00000523147 ABTB2Q8N961 1025 aa29.84■■■□□ 2.37
PTP4A3-205ENST00000523147 CARD11Q9BXL7 1154 aa29.84■■■□□ 2.37
PTP4A3-205ENST00000523147 BTG4Q9NY30 223 aa29.84■■■□□ 2.37
PTP4A3-205ENST00000523147 PRDM11Q9NQV5 511 aa29.83■■■□□ 2.37
PTP4A3-205ENST00000523147 CABP1Q9NZU7 370 aa29.83■■■□□ 2.37
PTP4A3-205ENST00000523147 GLI3P10071 1580 aa29.81■■■□□ 2.36
PTP4A3-205ENST00000523147 COL14A1Q05707 1796 aaKnown RBP29.8■■■□□ 2.36
PTP4A3-205ENST00000523147 CRYBG1Q9Y4K1 1723 aa29.79■■■□□ 2.36
PTP4A3-205ENST00000523147 ZC3H6P61129 1189 aaKnown RBP29.76■■■□□ 2.35
PTP4A3-205ENST00000523147 A0A0G2JS52 829 aa29.75■■■□□ 2.35
PTP4A3-205ENST00000523147 MYT1Q01538 1121 aa29.75■■■□□ 2.35
PTP4A3-205ENST00000523147 NLRP13Q86W25 1043 aa29.75■■■□□ 2.35
PTP4A3-205ENST00000523147 BRD4O60885 1362 aaPredicted RBP29.75■■■□□ 2.35
PTP4A3-205ENST00000523147 KIAA0232Q92628 1395 aa29.75■■■□□ 2.35
PTP4A3-205ENST00000523147 PHRF1Q9P1Y6 1649 aaKnown RBP29.74■■■□□ 2.35
PTP4A3-205ENST00000523147 SEPT12Q8IYM1 358 aa29.74■■■□□ 2.35
PTP4A3-205ENST00000523147 NRAPQ86VF7 1730 aa29.72■■■□□ 2.35
PTP4A3-205ENST00000523147 CHRNA2Q15822 529 aa29.72■■■□□ 2.35
PTP4A3-205ENST00000523147 USP6P35125 1406 aa29.71■■■□□ 2.35
PTP4A3-205ENST00000523147 ONECUT3O60422 494 aaPredicted RBP29.69■■■□□ 2.34
PTP4A3-205ENST00000523147 ZNF692Q9BU19 519 aaPredicted RBP29.69■■■□□ 2.34
PTP4A3-205ENST00000523147 FAM98CQ17RN3 349 aaKnown RBP29.68■■■□□ 2.34
PTP4A3-205ENST00000523147 SBNO2Q9Y2G9 1366 aa29.67■■■□□ 2.34
PTP4A3-205ENST00000523147 NLRP6P59044 892 aa29.67■■■□□ 2.34
PTP4A3-205ENST00000523147 STRN4Q9NRL3 753 aa29.67■■■□□ 2.34
PTP4A3-205ENST00000523147 GCP02774 474 aa29.66■■■□□ 2.34
PTP4A3-205ENST00000523147 EVA1CP58658 441 aa29.66■■■□□ 2.34
PTP4A3-205ENST00000523147 CCDC125Q86Z20 511 aa29.66■■■□□ 2.34
PTP4A3-205ENST00000523147 USP19O94966 1318 aa29.66■■■□□ 2.34
PTP4A3-205ENST00000523147 BRWD3Q6RI45 1802 aa29.64■■■□□ 2.34
PTP4A3-205ENST00000523147 KRT27Q7Z3Y8 459 aa29.64■■■□□ 2.34
PTP4A3-205ENST00000523147 PCGF6Q9BYE7 350 aa29.64■■■□□ 2.34
PTP4A3-205ENST00000523147 SPATA31A5Q5VU36 1347 aa29.64■■■□□ 2.34
PTP4A3-205ENST00000523147 SPATA31A7Q8IWB4 1347 aa29.64■■■□□ 2.34
PTP4A3-205ENST00000523147 NRKQ7Z2Y5 1582 aa29.64■■■□□ 2.33
PTP4A3-205ENST00000523147 EP400Q96L91 3159 aa29.63■■■□□ 2.33
PTP4A3-205ENST00000523147 ZBTB7CA1YPR0 619 aa29.61■■■□□ 2.33
PTP4A3-205ENST00000523147 TMC1Q8TDI8 760 aa29.61■■■□□ 2.33
PTP4A3-205ENST00000523147 CPDO75976 1380 aa29.61■■■□□ 2.33
PTP4A3-205ENST00000523147 KTN1Q86UP2 1357 aaKnown RBP29.6■■■□□ 2.33
PTP4A3-205ENST00000523147 TTC21BQ7Z4L5 1316 aa29.59■■■□□ 2.33
PTP4A3-205ENST00000523147 SSH2Q76I76 1423 aa29.59■■■□□ 2.33
PTP4A3-205ENST00000523147 AKAP12Q02952 1782 aa29.57■■■□□ 2.32
PTP4A3-205ENST00000523147 SPATA31A1Q5TZJ5 1347 aa29.57■■■□□ 2.32
PTP4A3-205ENST00000523147 SF3B2Q13435 895 aaKnown RBP29.57■■■□□ 2.32
PTP4A3-205ENST00000523147 USP35Q9P2H5 1018 aa29.57■■■□□ 2.32
PTP4A3-205ENST00000523147 TTC21AQ8NDW8 1320 aa29.56■■■□□ 2.32
PTP4A3-205ENST00000523147 CPSF1Q10570 1443 aaKnown RBP29.55■■■□□ 2.32
PTP4A3-205ENST00000523147 ST20-MTHFSA0A0A6YYL1 179 aa29.55■■■□□ 2.32
PTP4A3-205ENST00000523147 PIK3C2AO00443 1686 aa29.55■■■□□ 2.32
PTP4A3-205ENST00000523147 SLC24A1O60721 1099 aa29.54■■■□□ 2.32
PTP4A3-205ENST00000523147 BLMP54132 1417 aaPredicted RBP29.54■■■□□ 2.32
PTP4A3-205ENST00000523147 CAMTA1Q9Y6Y1 1673 aa29.53■■■□□ 2.32
PTP4A3-205ENST00000523147 HDGFL2Q7Z4V5 671 aaPredicted RBP29.53■■■□□ 2.32
PTP4A3-205ENST00000523147 LARP1Q6PKG0 1096 aaKnown RBP29.52■■■□□ 2.32
PTP4A3-205ENST00000523147 KCNH5Q8NCM2 988 aa29.52■■■□□ 2.32
PTP4A3-205ENST00000523147 SLIT3O75094 1523 aa29.51■■■□□ 2.32
PTP4A3-205ENST00000523147 SOX12O15370 315 aa29.51■■■□□ 2.31
PTP4A3-205ENST00000523147 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.51■■■□□ 2.31
PTP4A3-205ENST00000523147 PUS7Q96PZ0 661 aaKnown RBP29.5■■■□□ 2.31
PTP4A3-205ENST00000523147 SLC12A5Q9H2X9 1139 aa29.5■■■□□ 2.31
PTP4A3-205ENST00000523147 TERF2IPQ9NYB0 399 aa29.5■■■□□ 2.31
PTP4A3-205ENST00000523147 LMO7Q8WWI1 1683 aa29.5■■■□□ 2.31
PTP4A3-205ENST00000523147 CLSPNQ9HAW4 1339 aa29.49■■■□□ 2.31
PTP4A3-205ENST00000523147 TIMELESSQ9UNS1 1208 aa29.49■■■□□ 2.31
PTP4A3-205ENST00000523147 TESK2Q96S53 571 aa29.47■■■□□ 2.31
PTP4A3-205ENST00000523147 MON2Q7Z3U7 1717 aa29.47■■■□□ 2.31
PTP4A3-205ENST00000523147 AATKQ6ZMQ8 1374 aa29.47■■■□□ 2.31
PTP4A3-205ENST00000523147 THSD7AQ9UPZ6 1657 aa29.47■■■□□ 2.31
PTP4A3-205ENST00000523147 TCP11L2Q8N4U5 519 aa29.46■■■□□ 2.31
PTP4A3-205ENST00000523147 COL5A2P05997 1499 aaPredicted RBP29.45■■■□□ 2.31
PTP4A3-205ENST00000523147 FAM182BQ5T319 152 aa29.45■■■□□ 2.31
PTP4A3-205ENST00000523147 BARGINQ6ZT62 677 aa29.45■■■□□ 2.31
PTP4A3-205ENST00000523147 CD163L1Q9NR16 1453 aa29.43■■■□□ 2.3
PTP4A3-205ENST00000523147 USP47Q96K76 1375 aa29.43■■■□□ 2.3
PTP4A3-205ENST00000523147 ZRANB1Q9UGI0 708 aa29.43■■■□□ 2.3
PTP4A3-205ENST00000523147 THRAP3Q9Y2W1 955 aaKnown RBP29.43■■■□□ 2.3
PTP4A3-205ENST00000523147 PDE3BQ13370 1112 aa29.42■■■□□ 2.3
PTP4A3-205ENST00000523147 DEFB132Q7Z7B7 95 aa29.42■■■□□ 2.3
PTP4A3-205ENST00000523147 CRB1P82279 1406 aa29.41■■■□□ 2.3
PTP4A3-205ENST00000523147 TOM1L2Q6ZVM7 507 aa29.41■■■□□ 2.3
PTP4A3-205ENST00000523147 ARHGEF25Q86VW2 580 aa29.41■■■□□ 2.3
PTP4A3-205ENST00000523147 TMF1P82094 1093 aa29.4■■■□□ 2.3
PTP4A3-205ENST00000523147 NME9Q86XW9 330 aa29.4■■■□□ 2.3
PTP4A3-205ENST00000523147 A0A1W2PP64 1363 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms