RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 BRWD3Q6RI45 1802 aa21.76■■□□□ 1.07
PRKDC-204ENST00000521331 PAK3O75914 559 aaPredicted RBP21.75■■□□□ 1.07
PRKDC-204ENST00000521331 FAM98CQ17RN3 349 aaKnown RBP21.75■■□□□ 1.07
PRKDC-204ENST00000521331 ALS2Q96Q42 1657 aa21.75■■□□□ 1.07
PRKDC-204ENST00000521331 COL14A1Q05707 1796 aaKnown RBP21.73■■□□□ 1.07
PRKDC-204ENST00000521331 NUDT16Q96DE0 195 aaKnown RBP21.72■■□□□ 1.07
PRKDC-204ENST00000521331 PRDM11Q9NQV5 511 aa21.72■■□□□ 1.07
PRKDC-204ENST00000521331 NRAPQ86VF7 1730 aa21.72■■□□□ 1.07
PRKDC-204ENST00000521331 SPATA31A5Q5VU36 1347 aa21.71■■□□□ 1.07
PRKDC-204ENST00000521331 SPATA31A7Q8IWB4 1347 aa21.71■■□□□ 1.07
PRKDC-204ENST00000521331 ATP7BP35670 1465 aa21.71■■□□□ 1.07
PRKDC-204ENST00000521331 BAG6P46379 1132 aa21.7■■□□□ 1.06
PRKDC-204ENST00000521331 ARHGEF28Q8N1W1 1705 aaKnown RBP21.67■■□□□ 1.06
PRKDC-204ENST00000521331 CDK19Q9BWU1 502 aa21.67■■□□□ 1.06
PRKDC-204ENST00000521331 POLR3AO14802 1390 aaPredicted RBP21.65■■□□□ 1.06
PRKDC-204ENST00000521331 KIAA0232Q92628 1395 aa21.65■■□□□ 1.06
PRKDC-204ENST00000521331 CCDC61Q9Y6R9 512 aa21.65■■□□□ 1.06
PRKDC-204ENST00000521331 ITSN1Q15811 1721 aa21.65■■□□□ 1.06
PRKDC-204ENST00000521331 CRYBG1Q9Y4K1 1723 aa21.64■■□□□ 1.06
PRKDC-204ENST00000521331 ACEP12821 1306 aa21.62■■□□□ 1.05
PRKDC-204ENST00000521331 SPATA31A1Q5TZJ5 1347 aa21.62■■□□□ 1.05
PRKDC-204ENST00000521331 PLEKHG3A1L390 1219 aa21.62■■□□□ 1.05
PRKDC-204ENST00000521331 NBPF8Q3BBV2 869 aa21.62■■□□□ 1.05
PRKDC-204ENST00000521331 THSD7AQ9UPZ6 1657 aa21.61■■□□□ 1.05
PRKDC-204ENST00000521331 CHRNA2Q15822 529 aa21.61■■□□□ 1.05
PRKDC-204ENST00000521331 ZC3H6P61129 1189 aaKnown RBP21.6■■□□□ 1.05
PRKDC-204ENST00000521331 NUTM2GQ5VZR2 741 aa21.6■■□□□ 1.05
PRKDC-204ENST00000521331 DISP2A7MBM2 1401 aa21.59■■□□□ 1.05
PRKDC-204ENST00000521331 EN1Q05925 392 aaPredicted RBP21.59■■□□□ 1.05
PRKDC-204ENST00000521331 FAM182BQ5T319 152 aa21.59■■□□□ 1.05
PRKDC-204ENST00000521331 STRN4Q9NRL3 753 aa21.59■■□□□ 1.05
PRKDC-204ENST00000521331 KIAA1210Q9ULL0 1709 aa21.58■■□□□ 1.05
PRKDC-204ENST00000521331 PSDA5PKW4 1024 aaPredicted RBP21.57■■□□□ 1.04
PRKDC-204ENST00000521331 ABTB2Q8N961 1025 aa21.57■■□□□ 1.04
PRKDC-204ENST00000521331 PHRF1Q9P1Y6 1649 aaKnown RBP21.57■■□□□ 1.04
PRKDC-204ENST00000521331 TOPAZ1Q8N9V7 1692 aa21.56■■□□□ 1.04
PRKDC-204ENST00000521331 LRP5O75197 1615 aa21.56■■□□□ 1.04
PRKDC-204ENST00000521331 RGPD1P0DJD0 1748 aa21.56■■□□□ 1.04
PRKDC-204ENST00000521331 EVA1CP58658 441 aa21.56■■□□□ 1.04
PRKDC-204ENST00000521331 NBPF1Q3BBV0 1214 aa21.56■■□□□ 1.04
PRKDC-204ENST00000521331 FAM196AQ6ZSG2 479 aa21.56■■□□□ 1.04
PRKDC-204ENST00000521331 SRPK2P78362 688 aaKnown RBP21.55■■□□□ 1.04
PRKDC-204ENST00000521331 BARGINQ6ZT62 677 aa21.55■■□□□ 1.04
PRKDC-204ENST00000521331 CPDO75976 1380 aa21.55■■□□□ 1.04
PRKDC-204ENST00000521331 SSH2Q76I76 1423 aa21.55■■□□□ 1.04
PRKDC-204ENST00000521331 USP19O94966 1318 aa21.55■■□□□ 1.04
PRKDC-204ENST00000521331 CENPJQ9HC77 1338 aaPredicted RBP21.55■■□□□ 1.04
PRKDC-204ENST00000521331 BRD4O60885 1362 aaPredicted RBP21.53■■□□□ 1.04
PRKDC-204ENST00000521331 NLRP13Q86W25 1043 aa21.53■■□□□ 1.04
PRKDC-204ENST00000521331 USP35Q9P2H5 1018 aa21.52■■□□□ 1.04
PRKDC-204ENST00000521331 PPIP5K1Q6PFW1 1433 aa21.52■■□□□ 1.04
PRKDC-204ENST00000521331 TRIM37O94972 964 aa21.51■■□□□ 1.03
PRKDC-204ENST00000521331 PDE3BQ13370 1112 aa21.51■■□□□ 1.03
PRKDC-204ENST00000521331 NRKQ7Z2Y5 1582 aa21.51■■□□□ 1.03
PRKDC-204ENST00000521331 GCP02774 474 aa21.5■■□□□ 1.03
PRKDC-204ENST00000521331 EZH2Q15910 746 aaKnown RBP21.5■■□□□ 1.03
PRKDC-204ENST00000521331 TCP11L2Q8N4U5 519 aa21.5■■□□□ 1.03
PRKDC-204ENST00000521331 PARD3Q8TEW0 1356 aa21.49■■□□□ 1.03
PRKDC-204ENST00000521331 R3HDM1Q15032 1099 aaKnown RBP21.49■■□□□ 1.03
PRKDC-204ENST00000521331 LARP1Q6PKG0 1096 aaKnown RBP21.49■■□□□ 1.03
PRKDC-204ENST00000521331 CAMKK2Q96RR4 588 aa21.49■■□□□ 1.03
PRKDC-204ENST00000521331 CABP2Q9NPB3 220 aa21.49■■□□□ 1.03
PRKDC-204ENST00000521331 THRAP3Q9Y2W1 955 aaKnown RBP21.49■■□□□ 1.03
PRKDC-204ENST00000521331 CAMTA1Q9Y6Y1 1673 aa21.49■■□□□ 1.03
PRKDC-204ENST00000521331 TNS1Q9HBL0 1735 aaKnown RBP21.48■■□□□ 1.03
PRKDC-204ENST00000521331 APBA3O96018 575 aa21.47■■□□□ 1.03
PRKDC-204ENST00000521331 LMO7Q8WWI1 1683 aa21.45■■□□□ 1.02
PRKDC-204ENST00000521331 CABP1Q9NZU7 370 aa21.44■■□□□ 1.02
PRKDC-204ENST00000521331 USP6P35125 1406 aa21.44■■□□□ 1.02
PRKDC-204ENST00000521331 C11orf95C9JLR9 678 aaPredicted RBP21.43■■□□□ 1.02
PRKDC-204ENST00000521331 COL5A2P05997 1499 aaPredicted RBP21.43■■□□□ 1.02
PRKDC-204ENST00000521331 NLRP6P59044 892 aa21.42■■□□□ 1.02
PRKDC-204ENST00000521331 AATKQ6ZMQ8 1374 aa21.41■■□□□ 1.02
PRKDC-204ENST00000521331 EVC2Q86UK5 1308 aa21.41■■□□□ 1.02
PRKDC-204ENST00000521331 L3MBTL2Q969R5 705 aa21.41■■□□□ 1.02
PRKDC-204ENST00000521331 CRB1P82279 1406 aa21.4■■□□□ 1.02
PRKDC-204ENST00000521331 QRICH2Q9H0J4 1663 aa21.39■■□□□ 1.01
PRKDC-204ENST00000521331 ZBTB7CA1YPR0 619 aa21.38■■□□□ 1.01
PRKDC-204ENST00000521331 NBPF14Q5TI25 921 aa21.38■■□□□ 1.01
PRKDC-204ENST00000521331 SLIT3O75094 1523 aa21.38■■□□□ 1.01
PRKDC-204ENST00000521331 ZNF692Q9BU19 519 aaPredicted RBP21.36■■□□□ 1.01
PRKDC-204ENST00000521331 OVOS2A0A0G2JMS6 1433 aa21.35■■□□□ 1.01
PRKDC-204ENST00000521331 OVOS2A0A0J9YW53 1432 aa21.35■■□□□ 1.01
PRKDC-204ENST00000521331 OVOS2Q6IE36 1432 aa21.35■■□□□ 1.01
PRKDC-204ENST00000521331 PARP4Q9UKK3 1724 aaKnown RBP21.35■■□□□ 1.01
PRKDC-204ENST00000521331 TOM1L2Q6ZVM7 507 aa21.34■■□□□ 1.01
PRKDC-204ENST00000521331 ROCK2O75116 1388 aaKnown RBP21.34■■□□□ 1.01
PRKDC-204ENST00000521331 DDB1Q16531 1140 aa21.33■■□□□ 1.01
PRKDC-204ENST00000521331 KCNH5Q8NCM2 988 aa21.33■■□□□ 1.01
PRKDC-204ENST00000521331 WDR17Q8IZU2 1322 aa21.32■■□□□ 1
PRKDC-204ENST00000521331 RREB1Q92766 1687 aa21.32■■□□□ 1
PRKDC-204ENST00000521331 TTC21BQ7Z4L5 1316 aa21.31■■□□□ 1
PRKDC-204ENST00000521331 CPSF1Q10570 1443 aaKnown RBP21.31■■□□□ 1
PRKDC-204ENST00000521331 CDCA7Q9BWT1 371 aaPredicted RBP21.31■■□□□ 1
PRKDC-204ENST00000521331 TTC21AQ8NDW8 1320 aa21.3■■□□□ 1
PRKDC-204ENST00000521331 TRPM1Q7Z4N2 1603 aa21.3■■□□□ 1
PRKDC-204ENST00000521331 ARHGEF25Q86VW2 580 aa21.3■■□□□ 1
PRKDC-204ENST00000521331 SIN3AQ96ST3 1273 aa21.3■■□□□ 1
PRKDC-204ENST00000521331 PIK3C2AO00443 1686 aa21.3■■□□□ 1
PRKDC-204ENST00000521331 AXIN2Q9Y2T1 843 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms