RNA–Protein interactions for RNA: ENST00000520140.5

VPS37A-206, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS37A, Length 2,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-206ENST00000520140 PXDNQ92626 1479 aa19.57■□□□□ 0.72
VPS37A-206ENST00000520140 SOS2Q07890 1332 aaPredicted RBP19.55■□□□□ 0.72
VPS37A-206ENST00000520140 NRKQ7Z2Y5 1582 aa19.55■□□□□ 0.72
VPS37A-206ENST00000520140 TRPM3Q9HCF6 1732 aaPredicted RBP19.54■□□□□ 0.72
VPS37A-206ENST00000520140 TTC21BQ7Z4L5 1316 aa19.54■□□□□ 0.72
VPS37A-206ENST00000520140 AHDC1Q5TGY3 1603 aaPredicted RBP19.54■□□□□ 0.72
VPS37A-206ENST00000520140 HSPA1LP34931 641 aa19.54■□□□□ 0.72
VPS37A-206ENST00000520140 NME9Q86XW9 330 aa19.54■□□□□ 0.72
VPS37A-206ENST00000520140 ZRANB1Q9UGI0 708 aa19.54■□□□□ 0.72
VPS37A-206ENST00000520140 KNSTRNQ9Y448 316 aa19.54■□□□□ 0.72
VPS37A-206ENST00000520140 EDC4Q6P2E9 1401 aaKnown RBP19.54■□□□□ 0.72
VPS37A-206ENST00000520140 ABTB2Q8N961 1025 aa19.53■□□□□ 0.72
VPS37A-206ENST00000520140 PER1O15534 1290 aaPredicted RBP19.52■□□□□ 0.72
VPS37A-206ENST00000520140 SSH2Q76I76 1423 aa19.52■□□□□ 0.72
VPS37A-206ENST00000520140 COL16A1Q07092 1604 aaPredicted RBP19.51■□□□□ 0.71
VPS37A-206ENST00000520140 GGNBP2Q9H3C7 697 aa19.51■□□□□ 0.71
VPS37A-206ENST00000520140 FBXO41Q8TF61 875 aa19.51■□□□□ 0.71
VPS37A-206ENST00000520140 PIK3C2AO00443 1686 aa19.5■□□□□ 0.71
VPS37A-206ENST00000520140 CC2D1BQ5T0F9 858 aaKnown RBP19.5■□□□□ 0.71
VPS37A-206ENST00000520140 SPATA31A3Q5VYP0 1347 aa19.5■□□□□ 0.71
VPS37A-206ENST00000520140 TNS3Q68CZ2 1445 aa19.49■□□□□ 0.71
VPS37A-206ENST00000520140 FYB1O15117 783 aa19.49■□□□□ 0.71
VPS37A-206ENST00000520140 NLRP6P59044 892 aa19.49■□□□□ 0.71
VPS37A-206ENST00000520140 LRRC59Q96AG4 307 aaKnown RBP19.49■□□□□ 0.71
VPS37A-206ENST00000520140 CGNL1Q0VF96 1302 aa19.49■□□□□ 0.71
VPS37A-206ENST00000520140 ALS2Q96Q42 1657 aa19.48■□□□□ 0.71
VPS37A-206ENST00000520140 KIF20BQ96Q89 1820 aa19.48■□□□□ 0.71
VPS37A-206ENST00000520140 SOX12O15370 315 aa19.48■□□□□ 0.71
VPS37A-206ENST00000520140 SBNO1A3KN83 1393 aa19.48■□□□□ 0.71
VPS37A-206ENST00000520140 CABLES1Q8TDN4 633 aa19.48■□□□□ 0.71
VPS37A-206ENST00000520140 TTC21AQ8NDW8 1320 aa19.47■□□□□ 0.71
VPS37A-206ENST00000520140 AMER1Q5JTC6 1135 aaPredicted RBP19.46■□□□□ 0.71
VPS37A-206ENST00000520140 TNNT2P45379 298 aaPredicted RBP19.45■□□□□ 0.7
VPS37A-206ENST00000520140 BRD4O60885 1362 aaPredicted RBP19.44■□□□□ 0.7
VPS37A-206ENST00000520140 FBLN1P23142 703 aa19.43■□□□□ 0.7
VPS37A-206ENST00000520140 ARHGEF10O15013 1369 aa19.43■□□□□ 0.7
VPS37A-206ENST00000520140 COG3Q96JB2 828 aa19.43■□□□□ 0.7
VPS37A-206ENST00000520140 MARF1Q9Y4F3 1742 aaKnown RBP19.42■□□□□ 0.7
VPS37A-206ENST00000520140 NLRP13Q86W25 1043 aa19.42■□□□□ 0.7
VPS37A-206ENST00000520140 PNPLA6Q8IY17 1366 aa19.42■□□□□ 0.7
VPS37A-206ENST00000520140 NUTM2BA6NNL0 878 aaPredicted RBP19.4■□□□□ 0.7
VPS37A-206ENST00000520140 NUTM2EB1AL46 878 aaPredicted RBP19.4■□□□□ 0.7
VPS37A-206ENST00000520140 HAP1P54257 671 aaPredicted RBP19.4■□□□□ 0.7
VPS37A-206ENST00000520140 NUTM2AQ8IVF1 878 aaPredicted RBP19.4■□□□□ 0.7
VPS37A-206ENST00000520140 MED1Q15648 1581 aaPredicted RBP19.4■□□□□ 0.7
VPS37A-206ENST00000520140 MORC1Q86VD1 984 aa19.4■□□□□ 0.7
VPS37A-206ENST00000520140 OVOS2A0A0J9YW53 1432 aa19.39■□□□□ 0.69
VPS37A-206ENST00000520140 OVOS2Q6IE36 1432 aa19.39■□□□□ 0.69
VPS37A-206ENST00000520140 ANKRD26Q9UPS8 1709 aa19.39■□□□□ 0.69
VPS37A-206ENST00000520140 DIEXFQ68CQ4 756 aaKnown RBP19.39■□□□□ 0.69
VPS37A-206ENST00000520140 ZBTB7CA1YPR0 619 aa19.38■□□□□ 0.69
VPS37A-206ENST00000520140 USP31Q70CQ4 1352 aa19.38■□□□□ 0.69
VPS37A-206ENST00000520140 JCADQ9P266 1359 aa19.38■□□□□ 0.69
VPS37A-206ENST00000520140 GCP02774 474 aa19.37■□□□□ 0.69
VPS37A-206ENST00000520140 SHPRHQ149N8 1683 aa19.36■□□□□ 0.69
VPS37A-206ENST00000520140 PHRF1Q9P1Y6 1649 aaKnown RBP19.36■□□□□ 0.69
VPS37A-206ENST00000520140 CRYBG1Q9Y4K1 1723 aa19.36■□□□□ 0.69
VPS37A-206ENST00000520140 ZC3H6P61129 1189 aaKnown RBP19.36■□□□□ 0.69
VPS37A-206ENST00000520140 NSD2O96028 1365 aa19.36■□□□□ 0.69
VPS37A-206ENST00000520140 ABCA3Q99758 1704 aa19.36■□□□□ 0.69
VPS37A-206ENST00000520140 USP19O94966 1318 aa19.35■□□□□ 0.69
VPS37A-206ENST00000520140 COL22A1Q8NFW1 1626 aaPredicted RBP19.35■□□□□ 0.69
VPS37A-206ENST00000520140 ADAMTS2O95450 1211 aa19.34■□□□□ 0.69
VPS37A-206ENST00000520140 RRS1Q15050 365 aaKnown RBP19.34■□□□□ 0.69
VPS37A-206ENST00000520140 USP54Q70EL1 1684 aa19.34■□□□□ 0.69
VPS37A-206ENST00000520140 NPC1L1Q9UHC9 1359 aa19.34■□□□□ 0.69
VPS37A-206ENST00000520140 ILDR1Q86SU0 546 aaPredicted RBP19.34■□□□□ 0.69
VPS37A-206ENST00000520140 MAP2P11137 1827 aaKnown RBP19.33■□□□□ 0.69
VPS37A-206ENST00000520140 PPM1GO15355 546 aaPredicted RBP19.33■□□□□ 0.68
VPS37A-206ENST00000520140 SLIT3O75094 1523 aa19.32■□□□□ 0.68
VPS37A-206ENST00000520140 KCNH5Q8NCM2 988 aa19.31■□□□□ 0.68
VPS37A-206ENST00000520140 PRKRIP1Q9H875 184 aaPredicted RBP19.31■□□□□ 0.68
VPS37A-206ENST00000520140 LTN1O94822 1766 aa19.31■□□□□ 0.68
VPS37A-206ENST00000520140 ANP32CO43423 234 aa19.31■□□□□ 0.68
VPS37A-206ENST00000520140 CHRNA2Q15822 529 aa19.31■□□□□ 0.68
VPS37A-206ENST00000520140 NFAT5O94916 1531 aa19.3■□□□□ 0.68
VPS37A-206ENST00000520140 EMILIN1Q9Y6C2 1016 aa19.3■□□□□ 0.68
VPS37A-206ENST00000520140 PARD3Q8TEW0 1356 aa19.29■□□□□ 0.68
VPS37A-206ENST00000520140 KIAA0232Q92628 1395 aa19.29■□□□□ 0.68
VPS37A-206ENST00000520140 LRP6O75581 1613 aa19.28■□□□□ 0.68
VPS37A-206ENST00000520140 MAP3K19Q56UN5 1328 aa19.28■□□□□ 0.68
VPS37A-206ENST00000520140 SPATA31A6Q5VVP1 1343 aa19.28■□□□□ 0.68
VPS37A-206ENST00000520140 PRDM11Q9NQV5 511 aa19.28■□□□□ 0.68
VPS37A-206ENST00000520140 POLKQ9UBT6 870 aa19.27■□□□□ 0.68
VPS37A-206ENST00000520140 RALBP1Q15311 655 aa19.27■□□□□ 0.67
VPS37A-206ENST00000520140 PPP2R1AP30153 589 aa19.26■□□□□ 0.67
VPS37A-206ENST00000520140 FAM83GA6ND36 823 aa19.25■□□□□ 0.67
VPS37A-206ENST00000520140 AMPHP49418 695 aa19.25■□□□□ 0.67
VPS37A-206ENST00000520140 MTHFSP49914 203 aa19.25■□□□□ 0.67
VPS37A-206ENST00000520140 ARHGEF25Q86VW2 580 aa19.25■□□□□ 0.67
VPS37A-206ENST00000520140 C8orf37Q96NL8 207 aa19.25■□□□□ 0.67
VPS37A-206ENST00000520140 MEX3CQ5U5Q3 659 aaKnown RBP19.25■□□□□ 0.67
VPS37A-206ENST00000520140 RGPD5Q99666 1765 aa19.24■□□□□ 0.67
VPS37A-206ENST00000520140 AATKQ6ZMQ8 1374 aa19.24■□□□□ 0.67
VPS37A-206ENST00000520140 PEAK1Q9H792 1746 aa19.24■□□□□ 0.67
VPS37A-206ENST00000520140 AXIN2Q9Y2T1 843 aa19.23■□□□□ 0.67
VPS37A-206ENST00000520140 MYBBP1AQ9BQG0 1328 aaKnown RBP19.22■□□□□ 0.67
VPS37A-206ENST00000520140 HSP90AB2PQ58FF8 381 aa19.22■□□□□ 0.67
VPS37A-206ENST00000520140 LTV1Q96GA3 475 aaPredicted RBP19.22■□□□□ 0.67
VPS37A-206ENST00000520140 MIER1Q8N108 512 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms