RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 MSH5O43196 834 aa17.28■□□□□ 0.36
POLB-208ENST00000520008 SEPT12Q8IYM1 358 aa17.28■□□□□ 0.36
POLB-208ENST00000520008 PHRF1Q9P1Y6 1649 aaKnown RBP17.28■□□□□ 0.36
POLB-208ENST00000520008 THSD7AQ9UPZ6 1657 aa17.26■□□□□ 0.35
POLB-208ENST00000520008 PLEKHG5O94827 1062 aa17.25■□□□□ 0.35
POLB-208ENST00000520008 ZRANB1Q9UGI0 708 aa17.24■□□□□ 0.35
POLB-208ENST00000520008 POLR3AO14802 1390 aaPredicted RBP17.24■□□□□ 0.35
POLB-208ENST00000520008 BTG4Q9NY30 223 aa17.23■□□□□ 0.35
POLB-208ENST00000520008 NGDNQ8NEJ9 315 aaKnown RBP17.22■□□□□ 0.35
POLB-208ENST00000520008 NUDT16Q96DE0 195 aaKnown RBP17.22■□□□□ 0.35
POLB-208ENST00000520008 KRT27Q7Z3Y8 459 aa17.21■□□□□ 0.35
POLB-208ENST00000520008 CCDC9Q9Y3X0 531 aaKnown RBP17.21■□□□□ 0.35
POLB-208ENST00000520008 NRKQ7Z2Y5 1582 aa17.2■□□□□ 0.34
POLB-208ENST00000520008 DEFB132Q7Z7B7 95 aa17.2■□□□□ 0.34
POLB-208ENST00000520008 SPATA31A5Q5VU36 1347 aa17.2■□□□□ 0.34
POLB-208ENST00000520008 SPATA31A7Q8IWB4 1347 aa17.2■□□□□ 0.34
POLB-208ENST00000520008 CDK19Q9BWU1 502 aa17.19■□□□□ 0.34
POLB-208ENST00000520008 RGPD1P0DJD0 1748 aa17.18■□□□□ 0.34
POLB-208ENST00000520008 FAM98CQ17RN3 349 aaKnown RBP17.18■□□□□ 0.34
POLB-208ENST00000520008 PIAS4Q8N2W9 510 aaPredicted RBP17.18■□□□□ 0.34
POLB-208ENST00000520008 KIAA0232Q92628 1395 aa17.17■□□□□ 0.34
POLB-208ENST00000520008 LMO7Q8WWI1 1683 aa17.17■□□□□ 0.34
POLB-208ENST00000520008 PAK3O75914 559 aaPredicted RBP17.17■□□□□ 0.34
POLB-208ENST00000520008 NBPF1Q3BBV0 1214 aa17.17■□□□□ 0.34
POLB-208ENST00000520008 TNS1Q9HBL0 1735 aaKnown RBP17.17■□□□□ 0.34
POLB-208ENST00000520008 ACEP12821 1306 aa17.17■□□□□ 0.34
POLB-208ENST00000520008 QRICH2Q9H0J4 1663 aa17.16■□□□□ 0.34
POLB-208ENST00000520008 PLEKHG3A1L390 1219 aa17.16■□□□□ 0.34
POLB-208ENST00000520008 PRDM11Q9NQV5 511 aa17.16■□□□□ 0.34
POLB-208ENST00000520008 CCDC61Q9Y6R9 512 aa17.16■□□□□ 0.34
POLB-208ENST00000520008 LRP5O75197 1615 aa17.15■□□□□ 0.34
POLB-208ENST00000520008 SF3B2Q13435 895 aaKnown RBP17.14■□□□□ 0.33
POLB-208ENST00000520008 NBPF8Q3BBV2 869 aa17.14■□□□□ 0.33
POLB-208ENST00000520008 SPATA31A1Q5TZJ5 1347 aa17.14■□□□□ 0.33
POLB-208ENST00000520008 DISP2A7MBM2 1401 aa17.13■□□□□ 0.33
POLB-208ENST00000520008 USP19O94966 1318 aa17.13■□□□□ 0.33
POLB-208ENST00000520008 TRPM1Q7Z4N2 1603 aa17.12■□□□□ 0.33
POLB-208ENST00000520008 A0A0G2JS52 829 aa17.12■□□□□ 0.33
POLB-208ENST00000520008 MYT1Q01538 1121 aa17.12■□□□□ 0.33
POLB-208ENST00000520008 CAMTA1Q9Y6Y1 1673 aa17.12■□□□□ 0.33
POLB-208ENST00000520008 CPDO75976 1380 aa17.12■□□□□ 0.33
POLB-208ENST00000520008 PPIP5K1Q6PFW1 1433 aa17.12■□□□□ 0.33
POLB-208ENST00000520008 SSH2Q76I76 1423 aa17.12■□□□□ 0.33
POLB-208ENST00000520008 CHRNA2Q15822 529 aa17.11■□□□□ 0.33
POLB-208ENST00000520008 CENPJQ9HC77 1338 aaPredicted RBP17.11■□□□□ 0.33
POLB-208ENST00000520008 ADRA2BP18089 450 aa17.1■□□□□ 0.33
POLB-208ENST00000520008 BAG6P46379 1132 aa17.09■□□□□ 0.33
POLB-208ENST00000520008 ZC3H6P61129 1189 aaKnown RBP17.09■□□□□ 0.33
POLB-208ENST00000520008 FAM182BQ5T319 152 aa17.09■□□□□ 0.33
POLB-208ENST00000520008 NUTM2GQ5VZR2 741 aa17.09■□□□□ 0.33
POLB-208ENST00000520008 BRD4O60885 1362 aaPredicted RBP17.09■□□□□ 0.33
POLB-208ENST00000520008 SLIT3O75094 1523 aa17.08■□□□□ 0.32
POLB-208ENST00000520008 USP6P35125 1406 aa17.07■□□□□ 0.32
POLB-208ENST00000520008 ABTB2Q8N961 1025 aa17.07■□□□□ 0.32
POLB-208ENST00000520008 PIK3C2AO00443 1686 aa17.07■□□□□ 0.32
POLB-208ENST00000520008 COL5A2P05997 1499 aaPredicted RBP17.06■□□□□ 0.32
POLB-208ENST00000520008 SRPK2P78362 688 aaKnown RBP17.06■□□□□ 0.32
POLB-208ENST00000520008 BARGINQ6ZT62 677 aa17.06■□□□□ 0.32
POLB-208ENST00000520008 L3MBTL2Q969R5 705 aa17.06■□□□□ 0.32
POLB-208ENST00000520008 CABP2Q9NPB3 220 aa17.06■□□□□ 0.32
POLB-208ENST00000520008 STRN4Q9NRL3 753 aa17.06■□□□□ 0.32
POLB-208ENST00000520008 PARP4Q9UKK3 1724 aaKnown RBP17.06■□□□□ 0.32
POLB-208ENST00000520008 RREB1Q92766 1687 aa17.04■□□□□ 0.32
POLB-208ENST00000520008 EN1Q05925 392 aaPredicted RBP17.04■□□□□ 0.32
POLB-208ENST00000520008 COL18A1P39060 1754 aa17.03■□□□□ 0.32
POLB-208ENST00000520008 AKAP12Q02952 1782 aa17.03■□□□□ 0.32
POLB-208ENST00000520008 GCP02774 474 aa17.03■□□□□ 0.32
POLB-208ENST00000520008 LARP1Q6PKG0 1096 aaKnown RBP17.03■□□□□ 0.32
POLB-208ENST00000520008 NLRP13Q86W25 1043 aa17.03■□□□□ 0.32
POLB-208ENST00000520008 FAM196AQ6ZSG2 479 aa17.02■□□□□ 0.32
POLB-208ENST00000520008 PSDA5PKW4 1024 aaPredicted RBP17.01■□□□□ 0.31
POLB-208ENST00000520008 CABP1Q9NZU7 370 aa17.01■□□□□ 0.31
POLB-208ENST00000520008 USP35Q9P2H5 1018 aa17.01■□□□□ 0.31
POLB-208ENST00000520008 PEAK1Q9H792 1746 aa17.01■□□□□ 0.31
POLB-208ENST00000520008 WNK3Q9BYP7 1800 aa17■□□□□ 0.31
POLB-208ENST00000520008 LRRC37A3O60309 1634 aa17■□□□□ 0.31
POLB-208ENST00000520008 CRB1P82279 1406 aa17■□□□□ 0.31
POLB-208ENST00000520008 NUP188Q5SRE5 1749 aa17■□□□□ 0.31
POLB-208ENST00000520008 TCP11L2Q8N4U5 519 aa17■□□□□ 0.31
POLB-208ENST00000520008 CAMKK2Q96RR4 588 aa17■□□□□ 0.31
POLB-208ENST00000520008 PARD3Q8TEW0 1356 aa17■□□□□ 0.31
POLB-208ENST00000520008 EVA1CP58658 441 aa16.99■□□□□ 0.31
POLB-208ENST00000520008 EZH2Q15910 746 aaKnown RBP16.99■□□□□ 0.31
POLB-208ENST00000520008 SIN3AQ96ST3 1273 aa16.99■□□□□ 0.31
POLB-208ENST00000520008 THRAP3Q9Y2W1 955 aaKnown RBP16.99■□□□□ 0.31
POLB-208ENST00000520008 AATKQ6ZMQ8 1374 aa16.99■□□□□ 0.31
POLB-208ENST00000520008 TRIM37O94972 964 aa16.98■□□□□ 0.31
POLB-208ENST00000520008 EVC2Q86UK5 1308 aa16.97■□□□□ 0.31
POLB-208ENST00000520008 MON2Q7Z3U7 1717 aa16.97■□□□□ 0.31
POLB-208ENST00000520008 ROCK2O75116 1388 aaKnown RBP16.97■□□□□ 0.31
POLB-208ENST00000520008 CPSF1Q10570 1443 aaKnown RBP16.96■□□□□ 0.31
POLB-208ENST00000520008 NLRP6P59044 892 aa16.96■□□□□ 0.31
POLB-208ENST00000520008 USP54Q70EL1 1684 aa16.96■□□□□ 0.31
POLB-208ENST00000520008 RGPD3A6NKT7 1758 aaPredicted RBP16.96■□□□□ 0.31
POLB-208ENST00000520008 RGPD4Q7Z3J3 1758 aa16.96■□□□□ 0.31
POLB-208ENST00000520008 SBNO2Q9Y2G9 1366 aa16.95■□□□□ 0.3
POLB-208ENST00000520008 PDE3BQ13370 1112 aa16.95■□□□□ 0.3
POLB-208ENST00000520008 NFAT5O94916 1531 aa16.95■□□□□ 0.3
POLB-208ENST00000520008 SBF2Q86WG5 1849 aa16.94■□□□□ 0.3
POLB-208ENST00000520008 R3HDM1Q15032 1099 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms