RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 PLEKHG3A1L390 1219 aa24.35■■□□□ 1.49
FAM49B-214ENST00000519540 DUSP27Q5VZP5 1158 aa24.34■■□□□ 1.49
FAM49B-214ENST00000519540 NME9Q86XW9 330 aa24.34■■□□□ 1.49
FAM49B-214ENST00000519540 KCNA6P17658 529 aa24.34■■□□□ 1.49
FAM49B-214ENST00000519540 PNPLA6Q8IY17 1366 aa24.33■■□□□ 1.49
FAM49B-214ENST00000519540 SLFN5Q08AF3 891 aa24.33■■□□□ 1.49
FAM49B-214ENST00000519540 NUTM2FA1L443 756 aa24.32■■□□□ 1.48
FAM49B-214ENST00000519540 U2AF1L5P0DN76 240 aaPredicted RBP24.32■■□□□ 1.48
FAM49B-214ENST00000519540 U2AF1Q01081 240 aaKnown RBP eCLIP24.32■■□□□ 1.481e-8■■■□□ 18.4
FAM49B-214ENST00000519540 RRP1P56182 461 aaKnown RBP24.32■■□□□ 1.48
FAM49B-214ENST00000519540 TRMT2AQ8IZ69 625 aaKnown RBP24.32■■□□□ 1.48
FAM49B-214ENST00000519540 ACEP12821 1306 aa24.31■■□□□ 1.48
FAM49B-214ENST00000519540 IQSEC2Q5JU85 1478 aa24.31■■□□□ 1.48
FAM49B-214ENST00000519540 TCP11L2Q8N4U5 519 aa24.3■■□□□ 1.48
FAM49B-214ENST00000519540 POLKQ9UBT6 870 aa24.3■■□□□ 1.48
FAM49B-214ENST00000519540 ZRANB1Q9UGI0 708 aa24.3■■□□□ 1.48
FAM49B-214ENST00000519540 NKTRP30414 1462 aaKnown RBP24.29■■□□□ 1.48
FAM49B-214ENST00000519540 WWC1Q8IX03 1113 aa24.28■■□□□ 1.48
FAM49B-214ENST00000519540 FBLN1P23142 703 aa24.28■■□□□ 1.48
FAM49B-214ENST00000519540 CHD2O14647 1828 aaKnown RBP24.28■■□□□ 1.48
FAM49B-214ENST00000519540 MAP2P11137 1827 aaKnown RBP24.27■■□□□ 1.48
FAM49B-214ENST00000519540 DIAPH1O60610 1272 aaKnown RBP24.27■■□□□ 1.48
FAM49B-214ENST00000519540 COG3Q96JB2 828 aa24.27■■□□□ 1.48
FAM49B-214ENST00000519540 SPINK5Q9NQ38 1064 aaPredicted RBP24.27■■□□□ 1.48
FAM49B-214ENST00000519540 U2SURPO15042 1029 aaKnown RBP24.27■■□□□ 1.48
FAM49B-214ENST00000519540 NRKQ7Z2Y5 1582 aa24.26■■□□□ 1.47
FAM49B-214ENST00000519540 TTC21BQ7Z4L5 1316 aa24.26■■□□□ 1.47
FAM49B-214ENST00000519540 AATKQ6ZMQ8 1374 aa24.26■■□□□ 1.47
FAM49B-214ENST00000519540 E9PSI1 815 aa24.25■■□□□ 1.47
FAM49B-214ENST00000519540 NCBP3Q53F19 620 aaKnown RBP24.25■■□□□ 1.47
FAM49B-214ENST00000519540 PHF23Q9BUL5 403 aaPredicted RBP24.25■■□□□ 1.47
FAM49B-214ENST00000519540 RRP7AQ9Y3A4 280 aaKnown RBP24.25■■□□□ 1.47
FAM49B-214ENST00000519540 DMRT2Q9Y5R5 561 aa24.25■■□□□ 1.47
FAM49B-214ENST00000519540 USP6P35125 1406 aa24.25■■□□□ 1.47
FAM49B-214ENST00000519540 NEUROD2Q15784 382 aa24.24■■□□□ 1.47
FAM49B-214ENST00000519540 PLEKHF1Q96S99 279 aa24.23■■□□□ 1.47
FAM49B-214ENST00000519540 CCDC27Q2M243 656 aa24.23■■□□□ 1.47
FAM49B-214ENST00000519540 RGPD8O14715 1765 aaPredicted RBP24.22■■□□□ 1.47
FAM49B-214ENST00000519540 PPM1GO15355 546 aaPredicted RBP24.22■■□□□ 1.47
FAM49B-214ENST00000519540 NPHP4O75161 1426 aaPredicted RBP24.22■■□□□ 1.47
FAM49B-214ENST00000519540 SSH2Q76I76 1423 aa24.21■■□□□ 1.47
FAM49B-214ENST00000519540 B4GALNT3Q6L9W6 998 aa24.21■■□□□ 1.47
FAM49B-214ENST00000519540 EMILIN1Q9Y6C2 1016 aa24.21■■□□□ 1.47
FAM49B-214ENST00000519540 ANKARQ7Z5J8 1434 aa24.21■■□□□ 1.47
FAM49B-214ENST00000519540 PMFBP1Q8TBY8 1022 aa24.2■■□□□ 1.47
FAM49B-214ENST00000519540 WDR63Q8IWG1 891 aa24.19■■□□□ 1.46
FAM49B-214ENST00000519540 FMN2Q9NZ56 1722 aa24.19■■□□□ 1.46
FAM49B-214ENST00000519540 CDK12Q9NYV4 1490 aaPredicted RBP24.18■■□□□ 1.46
FAM49B-214ENST00000519540 PNNQ9H307 717 aaKnown RBP24.17■■□□□ 1.46
FAM49B-214ENST00000519540 OVOS2A0A0J9YW53 1432 aa24.17■■□□□ 1.46
FAM49B-214ENST00000519540 OVOS2Q6IE36 1432 aa24.17■■□□□ 1.46
FAM49B-214ENST00000519540 NGDNQ8NEJ9 315 aaKnown RBP24.17■■□□□ 1.46
FAM49B-214ENST00000519540 FCHSD2O94868 740 aa24.16■■□□□ 1.46
FAM49B-214ENST00000519540 TTC21AQ8NDW8 1320 aa24.16■■□□□ 1.46
FAM49B-214ENST00000519540 PLIN1O60240 522 aa24.15■■□□□ 1.46
FAM49B-214ENST00000519540 RRS1Q15050 365 aaKnown RBP24.15■■□□□ 1.46
FAM49B-214ENST00000519540 NALCNQ8IZF0 1738 aa24.15■■□□□ 1.46
FAM49B-214ENST00000519540 MAPK8IP3Q9UPT6 1336 aa24.14■■□□□ 1.46
FAM49B-214ENST00000519540 IL13P35225 146 aa24.14■■□□□ 1.45
FAM49B-214ENST00000519540 TMPOP42166 694 aaKnown RBP24.14■■□□□ 1.45
FAM49B-214ENST00000519540 EXOC6Q8TAG9 804 aa24.13■■□□□ 1.45
FAM49B-214ENST00000519540 USP31Q70CQ4 1352 aa24.11■■□□□ 1.45
FAM49B-214ENST00000519540 RSPH6AQ9H0K4 717 aa24.11■■□□□ 1.45
FAM49B-214ENST00000519540 RBM33Q96EV2 1170 aaKnown RBP24.1■■□□□ 1.45
FAM49B-214ENST00000519540 CCDC136Q96JN2 1154 aa24.1■■□□□ 1.45
FAM49B-214ENST00000519540 LRRC7Q96NW7 1537 aa24.1■■□□□ 1.45
FAM49B-214ENST00000519540 TSHZ2Q9NRE2 1034 aa24.09■■□□□ 1.45
FAM49B-214ENST00000519540 TRIM35Q9UPQ4 493 aa24.09■■□□□ 1.45
FAM49B-214ENST00000519540 ADGRL3Q9HAR2 1447 aa24.09■■□□□ 1.45
FAM49B-214ENST00000519540 PRKAR2BP31323 418 aa24.08■■□□□ 1.44
FAM49B-214ENST00000519540 HMOX1P09601 288 aa24.06■■□□□ 1.44
FAM49B-214ENST00000519540 RIPK4P57078 832 aa24.06■■□□□ 1.44
FAM49B-214ENST00000519540 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.06■■□□□ 1.44
FAM49B-214ENST00000519540 NWD1Q149M9 1564 aa24.05■■□□□ 1.44
FAM49B-214ENST00000519540 MYH16Q9H6N6 1097 aa24.05■■□□□ 1.44
FAM49B-214ENST00000519540 PIK3C2AO00443 1686 aa24.04■■□□□ 1.44
FAM49B-214ENST00000519540 C20orf194Q5TEA3 1177 aa24.04■■□□□ 1.44
FAM49B-214ENST00000519540 PHF8Q9UPP1 1060 aa24.04■■□□□ 1.44
FAM49B-214ENST00000519540 NEFMP07197 916 aa24.03■■□□□ 1.44
FAM49B-214ENST00000519540 CRBNQ96SW2 442 aa24.03■■□□□ 1.44
FAM49B-214ENST00000519540 BCAR3O75815 825 aa24.03■■□□□ 1.44
FAM49B-214ENST00000519540 PHACTR3Q96KR7 559 aa24.02■■□□□ 1.44
FAM49B-214ENST00000519540 PEAK1Q9H792 1746 aa24.01■■□□□ 1.43
FAM49B-214ENST00000519540 EIF4A2Q14240 407 aaKnown RBP24.01■■□□□ 1.43
FAM49B-214ENST00000519540 IL16Q14005 1332 aa24■■□□□ 1.43
FAM49B-214ENST00000519540 C14orf37Q86TY3 774 aa24■■□□□ 1.43
FAM49B-214ENST00000519540 SOX12O15370 315 aa23.99■■□□□ 1.43
FAM49B-214ENST00000519540 NLRP6P59044 892 aa23.99■■□□□ 1.43
FAM49B-214ENST00000519540 NFE2L2Q16236 605 aa23.99■■□□□ 1.43
FAM49B-214ENST00000519540 HSP90AB2PQ58FF8 381 aa23.98■■□□□ 1.43
FAM49B-214ENST00000519540 MAP3K19Q56UN5 1328 aa23.98■■□□□ 1.43
FAM49B-214ENST00000519540 PROSER2Q86WR7 435 aaPredicted RBP23.98■■□□□ 1.43
FAM49B-214ENST00000519540 USP54Q70EL1 1684 aa23.97■■□□□ 1.43
FAM49B-214ENST00000519540 RARSP54136 660 aaKnown RBP23.96■■□□□ 1.43
FAM49B-214ENST00000519540 ESCO1Q5FWF5 840 aa23.96■■□□□ 1.43
FAM49B-214ENST00000519540 FANCIQ9NVI1 1328 aa23.96■■□□□ 1.43
FAM49B-214ENST00000519540 MARF1Q9Y4F3 1742 aaKnown RBP23.96■■□□□ 1.43
FAM49B-214ENST00000519540 ABTB2Q8N961 1025 aa23.96■■□□□ 1.43
FAM49B-214ENST00000519540 PAK3O75914 559 aaPredicted RBP23.95■■□□□ 1.42
FAM49B-214ENST00000519540 SBNO1A3KN83 1393 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms