RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 QTRT2Q9H974 415 aaKnown RBP18.91■□□□□ 0.62
VEGFA-219ENST00000518824 USP21Q9UK80 565 aa18.91■□□□□ 0.62
VEGFA-219ENST00000518824 BCL9LQ86UU0 1499 aa18.9■□□□□ 0.62
VEGFA-219ENST00000518824 SBNO2Q9Y2G9 1366 aa18.89■□□□□ 0.61
VEGFA-219ENST00000518824 ST20-MTHFSA0A0A6YYL1 179 aa18.88■□□□□ 0.61
VEGFA-219ENST00000518824 HAP1P54257 671 aaPredicted RBP18.88■□□□□ 0.61
VEGFA-219ENST00000518824 SLIT2O94813 1529 aa18.87■□□□□ 0.61
VEGFA-219ENST00000518824 RXRBP28702 533 aa18.87■□□□□ 0.61
VEGFA-219ENST00000518824 TESK2Q96S53 571 aa18.87■□□□□ 0.61
VEGFA-219ENST00000518824 PLCH1Q4KWH8 1693 aa18.86■□□□□ 0.61
VEGFA-219ENST00000518824 PHRF1Q9P1Y6 1649 aaKnown RBP18.86■□□□□ 0.61
VEGFA-219ENST00000518824 ATRNO75882 1429 aa18.86■□□□□ 0.61
VEGFA-219ENST00000518824 FAM83GA6ND36 823 aa18.86■□□□□ 0.61
VEGFA-219ENST00000518824 USP6P35125 1406 aa18.85■□□□□ 0.61
VEGFA-219ENST00000518824 AKAP12Q02952 1782 aa18.85■□□□□ 0.61
VEGFA-219ENST00000518824 SSH2Q76I76 1423 aa18.84■□□□□ 0.61
VEGFA-219ENST00000518824 RGS12O14924 1447 aa18.83■□□□□ 0.61
VEGFA-219ENST00000518824 USP47Q96K76 1375 aa18.83■□□□□ 0.61
VEGFA-219ENST00000518824 RBM6P78332 1123 aaKnown RBP18.83■□□□□ 0.6
VEGFA-219ENST00000518824 TIMELESSQ9UNS1 1208 aa18.83■□□□□ 0.6
VEGFA-219ENST00000518824 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.83■□□□□ 0.6
VEGFA-219ENST00000518824 ABTB2Q8N961 1025 aa18.82■□□□□ 0.6
VEGFA-219ENST00000518824 TRPC5Q9UL62 973 aaPredicted RBP18.82■□□□□ 0.6
VEGFA-219ENST00000518824 ATAD2Q6PL18 1390 aa18.81■□□□□ 0.6
VEGFA-219ENST00000518824 UNC5CLQ8IV45 518 aa18.81■□□□□ 0.6
VEGFA-219ENST00000518824 CD163L1Q9NR16 1453 aa18.81■□□□□ 0.6
VEGFA-219ENST00000518824 PIK3C2AO00443 1686 aa18.81■□□□□ 0.6
VEGFA-219ENST00000518824 CPSF1Q10570 1443 aaKnown RBP18.81■□□□□ 0.6
VEGFA-219ENST00000518824 NRAPQ86VF7 1730 aa18.8■□□□□ 0.6
VEGFA-219ENST00000518824 SLC12A5Q9H2X9 1139 aa18.8■□□□□ 0.6
VEGFA-219ENST00000518824 GLI3P10071 1580 aa18.8■□□□□ 0.6
VEGFA-219ENST00000518824 NRKQ7Z2Y5 1582 aa18.8■□□□□ 0.6
VEGFA-219ENST00000518824 NWD2Q9ULI1 1742 aa18.8■□□□□ 0.6
VEGFA-219ENST00000518824 CDK12Q9NYV4 1490 aaPredicted RBP18.79■□□□□ 0.6
VEGFA-219ENST00000518824 ZC3H6P61129 1189 aaKnown RBP18.79■□□□□ 0.6
VEGFA-219ENST00000518824 CHRNA2Q15822 529 aa18.79■□□□□ 0.6
VEGFA-219ENST00000518824 KIAA0232Q92628 1395 aa18.79■□□□□ 0.6
VEGFA-219ENST00000518824 COL14A1Q05707 1796 aaKnown RBP18.78■□□□□ 0.6
VEGFA-219ENST00000518824 USP19O94966 1318 aa18.78■□□□□ 0.6
VEGFA-219ENST00000518824 MON2Q7Z3U7 1717 aa18.78■□□□□ 0.6
VEGFA-219ENST00000518824 TMC1Q8TDI8 760 aa18.78■□□□□ 0.6
VEGFA-219ENST00000518824 TTC21BQ7Z4L5 1316 aa18.77■□□□□ 0.6
VEGFA-219ENST00000518824 GJD4Q96KN9 370 aaPredicted RBP18.77■□□□□ 0.6
VEGFA-219ENST00000518824 BTG4Q9NY30 223 aa18.77■□□□□ 0.6
VEGFA-219ENST00000518824 ZRANB1Q9UGI0 708 aa18.76■□□□□ 0.59
VEGFA-219ENST00000518824 KTN1Q86UP2 1357 aaKnown RBP18.76■□□□□ 0.59
VEGFA-219ENST00000518824 PRDM11Q9NQV5 511 aa18.75■□□□□ 0.59
VEGFA-219ENST00000518824 BRD4O60885 1362 aaPredicted RBP18.74■□□□□ 0.59
VEGFA-219ENST00000518824 NLRP6P59044 892 aa18.74■□□□□ 0.59
VEGFA-219ENST00000518824 NLRP13Q86W25 1043 aa18.74■□□□□ 0.59
VEGFA-219ENST00000518824 ZNF692Q9BU19 519 aaPredicted RBP18.74■□□□□ 0.59
VEGFA-219ENST00000518824 GCP02774 474 aa18.73■□□□□ 0.59
VEGFA-219ENST00000518824 VPS72Q15906 364 aa18.73■□□□□ 0.59
VEGFA-219ENST00000518824 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.73■□□□□ 0.59
VEGFA-219ENST00000518824 SLIT3O75094 1523 aa18.73■□□□□ 0.59
VEGFA-219ENST00000518824 A0A1W2PP64 1363 aa18.72■□□□□ 0.59
VEGFA-219ENST00000518824 LMO7Q8WWI1 1683 aa18.71■□□□□ 0.59
VEGFA-219ENST00000518824 PUS7Q96PZ0 661 aaKnown RBP18.71■□□□□ 0.59
VEGFA-219ENST00000518824 CCDC9Q9Y3X0 531 aaKnown RBP18.71■□□□□ 0.59
VEGFA-219ENST00000518824 CAMTA1Q9Y6Y1 1673 aa18.7■□□□□ 0.58
VEGFA-219ENST00000518824 BRWD3Q6RI45 1802 aa18.7■□□□□ 0.58
VEGFA-219ENST00000518824 NME9Q86XW9 330 aa18.7■□□□□ 0.58
VEGFA-219ENST00000518824 ZBTB7CA1YPR0 619 aa18.69■□□□□ 0.58
VEGFA-219ENST00000518824 TMF1P82094 1093 aa18.69■□□□□ 0.58
VEGFA-219ENST00000518824 UPF1Q92900 1129 aaKnown RBP eCLIP18.69■□□□□ 0.58
VEGFA-219ENST00000518824 TTC21AQ8NDW8 1320 aa18.69■□□□□ 0.58
VEGFA-219ENST00000518824 CPDO75976 1380 aa18.68■□□□□ 0.58
VEGFA-219ENST00000518824 SOX12O15370 315 aa18.68■□□□□ 0.58
VEGFA-219ENST00000518824 STRN4Q9NRL3 753 aa18.68■□□□□ 0.58
VEGFA-219ENST00000518824 HDGFL2Q7Z4V5 671 aaPredicted RBP18.67■□□□□ 0.58
VEGFA-219ENST00000518824 COL18A1P39060 1754 aa18.67■□□□□ 0.58
VEGFA-219ENST00000518824 HSPA5P11021 654 aaKnown RBP18.66■□□□□ 0.58
VEGFA-219ENST00000518824 SPATA31A5Q5VU36 1347 aa18.66■□□□□ 0.58
VEGFA-219ENST00000518824 SPATA31A7Q8IWB4 1347 aa18.66■□□□□ 0.58
VEGFA-219ENST00000518824 MYOM1P52179 1685 aa18.66■□□□□ 0.58
VEGFA-219ENST00000518824 EDC4Q6P2E9 1401 aaKnown RBP18.66■□□□□ 0.58
VEGFA-219ENST00000518824 NFAT5O94916 1531 aa18.65■□□□□ 0.58
VEGFA-219ENST00000518824 FAM98CQ17RN3 349 aaKnown RBP18.65■□□□□ 0.58
VEGFA-219ENST00000518824 SEPT12Q8IYM1 358 aa18.65■□□□□ 0.58
VEGFA-219ENST00000518824 TERF2IPQ9NYB0 399 aa18.65■□□□□ 0.58
VEGFA-219ENST00000518824 USP54Q70EL1 1684 aa18.65■□□□□ 0.58
VEGFA-219ENST00000518824 RGPD5Q99666 1765 aa18.65■□□□□ 0.58
VEGFA-219ENST00000518824 USP31Q70CQ4 1352 aa18.64■□□□□ 0.57
VEGFA-219ENST00000518824 ONECUT3O60422 494 aaPredicted RBP18.63■□□□□ 0.57
VEGFA-219ENST00000518824 LARP1Q6PKG0 1096 aaKnown RBP18.63■□□□□ 0.57
VEGFA-219ENST00000518824 AXIN2Q9Y2T1 843 aa18.63■□□□□ 0.57
VEGFA-219ENST00000518824 ARHGEF25Q86VW2 580 aa18.62■□□□□ 0.57
VEGFA-219ENST00000518824 SPATA31A1Q5TZJ5 1347 aa18.62■□□□□ 0.57
VEGFA-219ENST00000518824 ANKRD36BQ8N2N9 1353 aa18.62■□□□□ 0.57
VEGFA-219ENST00000518824 NINLQ9Y2I6 1382 aa18.62■□□□□ 0.57
VEGFA-219ENST00000518824 COL5A2P05997 1499 aaPredicted RBP18.62■□□□□ 0.57
VEGFA-219ENST00000518824 SLC24A1O60721 1099 aa18.61■□□□□ 0.57
VEGFA-219ENST00000518824 EIF4G2P78344 907 aaKnown RBP eCLIP18.61■□□□□ 0.57
VEGFA-219ENST00000518824 USP35Q9P2H5 1018 aa18.61■□□□□ 0.57
VEGFA-219ENST00000518824 OVOS2A0A0J9YW53 1432 aa18.6■□□□□ 0.57
VEGFA-219ENST00000518824 OVOS2Q6IE36 1432 aa18.6■□□□□ 0.57
VEGFA-219ENST00000518824 AATKQ6ZMQ8 1374 aa18.6■□□□□ 0.57
VEGFA-219ENST00000518824 FBLN1P23142 703 aa18.6■□□□□ 0.57
VEGFA-219ENST00000518824 EVA1CP58658 441 aa18.6■□□□□ 0.57
VEGFA-219ENST00000518824 THSD7AQ9UPZ6 1657 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms