RNA–Protein interactions for RNA: ENST00000518537.5

PCM1-206, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-206ENST00000518537 U2AF1L5P0DN76 240 aaPredicted RBP21.86■■□□□ 1.09
PCM1-206ENST00000518537 U2AF1Q01081 240 aaKnown RBP eCLIP21.86■■□□□ 1.094e-7■■■■□ 24.2
PCM1-206ENST00000518537 COL3A1P02461 1466 aaPredicted RBP21.85■■□□□ 1.09
PCM1-206ENST00000518537 NME9Q86XW9 330 aa21.85■■□□□ 1.09
PCM1-206ENST00000518537 RRP1P56182 461 aaKnown RBP21.85■■□□□ 1.09
PCM1-206ENST00000518537 PLEKHG3A1L390 1219 aa21.84■■□□□ 1.09
PCM1-206ENST00000518537 KCNA6P17658 529 aa21.84■■□□□ 1.09
PCM1-206ENST00000518537 SLFN5Q08AF3 891 aa21.83■■□□□ 1.09
PCM1-206ENST00000518537 DUSP27Q5VZP5 1158 aa21.83■■□□□ 1.09
PCM1-206ENST00000518537 U2SURPO15042 1029 aaKnown RBP21.82■■□□□ 1.08
PCM1-206ENST00000518537 ACEP12821 1306 aa21.82■■□□□ 1.08
PCM1-206ENST00000518537 IQSEC2Q5JU85 1478 aa21.82■■□□□ 1.08
PCM1-206ENST00000518537 TCP11L2Q8N4U5 519 aa21.82■■□□□ 1.08
PCM1-206ENST00000518537 COG3Q96JB2 828 aa21.82■■□□□ 1.08
PCM1-206ENST00000518537 DIAPH1O60610 1272 aaKnown RBP21.81■■□□□ 1.08
PCM1-206ENST00000518537 CHD2O14647 1828 aaKnown RBP21.81■■□□□ 1.08
PCM1-206ENST00000518537 NKTRP30414 1462 aaKnown RBP21.8■■□□□ 1.08
PCM1-206ENST00000518537 MAP2P11137 1827 aaKnown RBP21.8■■□□□ 1.08
PCM1-206ENST00000518537 PNPLA6Q8IY17 1366 aa21.8■■□□□ 1.08
PCM1-206ENST00000518537 POLKQ9UBT6 870 aa21.8■■□□□ 1.08
PCM1-206ENST00000518537 ZRANB1Q9UGI0 708 aa21.8■■□□□ 1.08
PCM1-206ENST00000518537 NRKQ7Z2Y5 1582 aa21.79■■□□□ 1.08
PCM1-206ENST00000518537 E9PSI1 815 aa21.79■■□□□ 1.08
PCM1-206ENST00000518537 TTC21BQ7Z4L5 1316 aa21.79■■□□□ 1.08
PCM1-206ENST00000518537 PPM1GO15355 546 aaPredicted RBP21.78■■□□□ 1.08
PCM1-206ENST00000518537 NEUROD2Q15784 382 aa21.78■■□□□ 1.08
PCM1-206ENST00000518537 WWC1Q8IX03 1113 aa21.78■■□□□ 1.08
PCM1-206ENST00000518537 TRMT2AQ8IZ69 625 aaKnown RBP21.78■■□□□ 1.08
PCM1-206ENST00000518537 RRP7AQ9Y3A4 280 aaKnown RBP21.78■■□□□ 1.08
PCM1-206ENST00000518537 FBLN1P23142 703 aa21.78■■□□□ 1.08
PCM1-206ENST00000518537 USP6P35125 1406 aa21.77■■□□□ 1.08
PCM1-206ENST00000518537 AATKQ6ZMQ8 1374 aa21.77■■□□□ 1.08
PCM1-206ENST00000518537 NPHP4O75161 1426 aaPredicted RBP21.77■■□□□ 1.08
PCM1-206ENST00000518537 RGPD8O14715 1765 aaPredicted RBP21.77■■□□□ 1.07
PCM1-206ENST00000518537 SPINK5Q9NQ38 1064 aaPredicted RBP21.75■■□□□ 1.07
PCM1-206ENST00000518537 PMFBP1Q8TBY8 1022 aa21.75■■□□□ 1.07
PCM1-206ENST00000518537 ANKARQ7Z5J8 1434 aa21.75■■□□□ 1.07
PCM1-206ENST00000518537 NCBP3Q53F19 620 aaKnown RBP21.74■■□□□ 1.07
PCM1-206ENST00000518537 B4GALNT3Q6L9W6 998 aa21.74■■□□□ 1.07
PCM1-206ENST00000518537 PNNQ9H307 717 aaKnown RBP21.74■■□□□ 1.07
PCM1-206ENST00000518537 FMN2Q9NZ56 1722 aa21.74■■□□□ 1.07
PCM1-206ENST00000518537 DMRT2Q9Y5R5 561 aa21.74■■□□□ 1.07
PCM1-206ENST00000518537 EMILIN1Q9Y6C2 1016 aa21.74■■□□□ 1.07
PCM1-206ENST00000518537 CCDC27Q2M243 656 aa21.73■■□□□ 1.07
PCM1-206ENST00000518537 NGDNQ8NEJ9 315 aaKnown RBP21.73■■□□□ 1.07
PCM1-206ENST00000518537 MAPK8IP3Q9UPT6 1336 aa21.73■■□□□ 1.07
PCM1-206ENST00000518537 CDK12Q9NYV4 1490 aaPredicted RBP21.72■■□□□ 1.07
PCM1-206ENST00000518537 PLEKHF1Q96S99 279 aa21.72■■□□□ 1.07
PCM1-206ENST00000518537 WDR63Q8IWG1 891 aa21.71■■□□□ 1.07
PCM1-206ENST00000518537 PHF23Q9BUL5 403 aaPredicted RBP21.71■■□□□ 1.07
PCM1-206ENST00000518537 NALCNQ8IZF0 1738 aa21.71■■□□□ 1.07
PCM1-206ENST00000518537 TTC21AQ8NDW8 1320 aa21.7■■□□□ 1.06
PCM1-206ENST00000518537 SSH2Q76I76 1423 aa21.69■■□□□ 1.06
PCM1-206ENST00000518537 RRS1Q15050 365 aaKnown RBP21.69■■□□□ 1.06
PCM1-206ENST00000518537 OVOS2A0A0J9YW53 1432 aa21.69■■□□□ 1.06
PCM1-206ENST00000518537 OVOS2Q6IE36 1432 aa21.69■■□□□ 1.06
PCM1-206ENST00000518537 PLIN1O60240 522 aa21.68■■□□□ 1.06
PCM1-206ENST00000518537 FCHSD2O94868 740 aa21.68■■□□□ 1.06
PCM1-206ENST00000518537 CCDC136Q96JN2 1154 aa21.67■■□□□ 1.06
PCM1-206ENST00000518537 TMPOP42166 694 aaKnown RBP21.67■■□□□ 1.06
PCM1-206ENST00000518537 EXOC6Q8TAG9 804 aa21.67■■□□□ 1.06
PCM1-206ENST00000518537 NEFMP07197 916 aa21.65■■□□□ 1.06
PCM1-206ENST00000518537 IL13P35225 146 aa21.65■■□□□ 1.06
PCM1-206ENST00000518537 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.65■■□□□ 1.06
PCM1-206ENST00000518537 LRRC7Q96NW7 1537 aa21.65■■□□□ 1.06
PCM1-206ENST00000518537 RBM33Q96EV2 1170 aaKnown RBP21.64■■□□□ 1.05
PCM1-206ENST00000518537 RSPH6AQ9H0K4 717 aa21.64■■□□□ 1.05
PCM1-206ENST00000518537 ADGRL3Q9HAR2 1447 aa21.64■■□□□ 1.05
PCM1-206ENST00000518537 USP31Q70CQ4 1352 aa21.63■■□□□ 1.05
PCM1-206ENST00000518537 PRKAR2BP31323 418 aa21.63■■□□□ 1.05
PCM1-206ENST00000518537 MYH16Q9H6N6 1097 aa21.62■■□□□ 1.05
PCM1-206ENST00000518537 TSHZ2Q9NRE2 1034 aa21.62■■□□□ 1.05
PCM1-206ENST00000518537 HMOX1P09601 288 aa21.61■■□□□ 1.05
PCM1-206ENST00000518537 NWD1Q149M9 1564 aa21.61■■□□□ 1.05
PCM1-206ENST00000518537 RIPK4P57078 832 aa21.61■■□□□ 1.05
PCM1-206ENST00000518537 C14orf37Q86TY3 774 aa21.61■■□□□ 1.05
PCM1-206ENST00000518537 TRIM35Q9UPQ4 493 aa21.6■■□□□ 1.05
PCM1-206ENST00000518537 PIK3C2AO00443 1686 aa21.6■■□□□ 1.05
PCM1-206ENST00000518537 CRBNQ96SW2 442 aa21.6■■□□□ 1.05
PCM1-206ENST00000518537 PHF8Q9UPP1 1060 aa21.6■■□□□ 1.05
PCM1-206ENST00000518537 SOX12O15370 315 aa21.58■■□□□ 1.04
PCM1-206ENST00000518537 PEAK1Q9H792 1746 aa21.56■■□□□ 1.04
PCM1-206ENST00000518537 BCAR3O75815 825 aa21.56■■□□□ 1.04
PCM1-206ENST00000518537 C20orf194Q5TEA3 1177 aa21.56■■□□□ 1.04
PCM1-206ENST00000518537 NLRP6P59044 892 aa21.55■■□□□ 1.04
PCM1-206ENST00000518537 PROSER2Q86WR7 435 aaPredicted RBP21.55■■□□□ 1.04
PCM1-206ENST00000518537 IL16Q14005 1332 aa21.55■■□□□ 1.04
PCM1-206ENST00000518537 EIF4A2Q14240 407 aaKnown RBP21.55■■□□□ 1.04
PCM1-206ENST00000518537 NFE2L2Q16236 605 aa21.55■■□□□ 1.04
PCM1-206ENST00000518537 PAK3O75914 559 aaPredicted RBP21.54■■□□□ 1.04
PCM1-206ENST00000518537 PHACTR3Q96KR7 559 aa21.54■■□□□ 1.04
PCM1-206ENST00000518537 ESCO1Q5FWF5 840 aa21.53■■□□□ 1.04
PCM1-206ENST00000518537 MAP3K19Q56UN5 1328 aa21.53■■□□□ 1.04
PCM1-206ENST00000518537 USP54Q70EL1 1684 aa21.53■■□□□ 1.04
PCM1-206ENST00000518537 ABTB2Q8N961 1025 aa21.52■■□□□ 1.04
PCM1-206ENST00000518537 SBNO1A3KN83 1393 aa21.51■■□□□ 1.03
PCM1-206ENST00000518537 FANCIQ9NVI1 1328 aa21.51■■□□□ 1.03
PCM1-206ENST00000518537 HSP90AB2PQ58FF8 381 aa21.51■■□□□ 1.03
PCM1-206ENST00000518537 NUTM2GQ5VZR2 741 aa21.51■■□□□ 1.03
PCM1-206ENST00000518537 RARSP54136 660 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms