RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 SLC24A3Q9HC58 644 aa7.06□□□□□ -1.28
HMGB1P19-201ENST00000517578 SENP2Q9HC62 589 aa7.06□□□□□ -1.28
HMGB1P19-201ENST00000517578 KCNH2Q12809 1159 aa7.05□□□□□ -1.28
HMGB1P19-201ENST00000517578 DESI1Q6ICB0 168 aa7.05□□□□□ -1.28
HMGB1P19-201ENST00000517578 LINC01559Q495D7 138 aa7.04□□□□□ -1.28
HMGB1P19-201ENST00000517578 PARP9Q8IXQ6 854 aa7.04□□□□□ -1.28
HMGB1P19-201ENST00000517578 BAP1Q92560 729 aa7.04□□□□□ -1.28
HMGB1P19-201ENST00000517578 AK7Q96M32 723 aa7.04□□□□□ -1.28
HMGB1P19-201ENST00000517578 TBC1D2Q9BYX2 928 aa7.04□□□□□ -1.28
HMGB1P19-201ENST00000517578 SPDYE5A6NIY4 337 aa7.03□□□□□ -1.28
HMGB1P19-201ENST00000517578 TERTO14746 1132 aaKnown RBP7.03□□□□□ -1.28
HMGB1P19-201ENST00000517578 TRIM66O15016 1216 aa7.03□□□□□ -1.28
HMGB1P19-201ENST00000517578 WIPF1O43516 503 aa7.03□□□□□ -1.28
HMGB1P19-201ENST00000517578 BMP1P13497 986 aa7.03□□□□□ -1.28
HMGB1P19-201ENST00000517578 GJA5P36382 358 aa7.03□□□□□ -1.28
HMGB1P19-201ENST00000517578 RSBN1LQ6PCB5 846 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P19-201ENST00000517578 TRIM46Q7Z4K8 759 aa7.03□□□□□ -1.28
HMGB1P19-201ENST00000517578 KIFC2Q96AC6 838 aa7.03□□□□□ -1.28
HMGB1P19-201ENST00000517578 PCDHB15Q9Y5E8 787 aa7.03□□□□□ -1.28
HMGB1P19-201ENST00000517578 TLL2Q9Y6L7 1015 aa7.03□□□□□ -1.28
HMGB1P19-201ENST00000517578 ZNF511Q8NB15 262 aa7.02□□□□□ -1.29
HMGB1P19-201ENST00000517578 WASF2Q9Y6W5 498 aa7.02□□□□□ -1.29
HMGB1P19-201ENST00000517578 CFAP99D6REC4 459 aa7.01□□□□□ -1.29
HMGB1P19-201ENST00000517578 CAPN5O15484 640 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P19-201ENST00000517578 TPRNQ4KMQ1 711 aa7.01□□□□□ -1.29
HMGB1P19-201ENST00000517578 LYPD8Q6UX82 237 aa7□□□□□ -1.29
HMGB1P19-201ENST00000517578 SPTLC1O15269 473 aa6.99□□□□□ -1.29
HMGB1P19-201ENST00000517578 VARSP26640 1264 aaKnown RBP6.99□□□□□ -1.29
HMGB1P19-201ENST00000517578 MPNDQ8N594 471 aa6.99□□□□□ -1.29
HMGB1P19-201ENST00000517578 F12P00748 615 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P19-201ENST00000517578 RANGAP1P46060 587 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P19-201ENST00000517578 PDE4DQ08499 809 aa6.98□□□□□ -1.29
HMGB1P19-201ENST00000517578 DIXDC1Q155Q3 683 aa6.98□□□□□ -1.29
HMGB1P19-201ENST00000517578 MAP10Q9P2G4 905 aa6.98□□□□□ -1.29
HMGB1P19-201ENST00000517578 NISCHQ9Y2I1 1504 aa6.97□□□□□ -1.29
HMGB1P19-201ENST00000517578 CTHP32929 405 aa6.97□□□□□ -1.29
HMGB1P19-201ENST00000517578 NNTQ13423 1086 aa6.97□□□□□ -1.29
HMGB1P19-201ENST00000517578 RIC3Q7Z5B4 369 aa6.97□□□□□ -1.29
HMGB1P19-201ENST00000517578 CABLES1Q8TDN4 633 aa6.97□□□□□ -1.29
HMGB1P19-201ENST00000517578 ZBTB3Q9H5J0 574 aa6.97□□□□□ -1.29
HMGB1P19-201ENST00000517578 PLEKHG3A1L390 1219 aa6.96□□□□□ -1.3
HMGB1P19-201ENST00000517578 PRPF38BQ5VTL8 546 aaKnown RBP6.96□□□□□ -1.3
HMGB1P19-201ENST00000517578 FOXJ1Q92949 421 aa6.96□□□□□ -1.3
HMGB1P19-201ENST00000517578 NXF1Q9UBU9 619 aaKnown RBP6.96□□□□□ -1.3
HMGB1P19-201ENST00000517578 PER1O15534 1290 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P19-201ENST00000517578 TIMP2P16035 220 aa6.95□□□□□ -1.3
HMGB1P19-201ENST00000517578 INSM1Q01101 510 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P19-201ENST00000517578 ZFP42Q96MM3 310 aa6.95□□□□□ -1.3
HMGB1P19-201ENST00000517578 KLF16Q9BXK1 252 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P19-201ENST00000517578 STK17AQ9UEE5 414 aa6.95□□□□□ -1.3
HMGB1P19-201ENST00000517578 LIMD1Q9UGP4 676 aa6.95□□□□□ -1.3
HMGB1P19-201ENST00000517578 QPCTQ16769 361 aa6.94□□□□□ -1.3
HMGB1P19-201ENST00000517578 CSPP1Q1MSJ5 1256 aa6.94□□□□□ -1.3
HMGB1P19-201ENST00000517578 C4orf48Q5BLP8 95 aa6.94□□□□□ -1.3
HMGB1P19-201ENST00000517578 MYSM1Q5VVJ2 828 aa6.94□□□□□ -1.3
HMGB1P19-201ENST00000517578 ADH1CP00326 375 aa6.93□□□□□ -1.3
HMGB1P19-201ENST00000517578 MRPL14Q6P1L8 145 aaKnown RBP6.93□□□□□ -1.3
HMGB1P19-201ENST00000517578 FAM174AQ8TBP5 190 aa6.93□□□□□ -1.3
HMGB1P19-201ENST00000517578 CDK15Q96Q40 435 aa6.93□□□□□ -1.3
HMGB1P19-201ENST00000517578 VEGFBP49765 207 aa6.92□□□□□ -1.3
HMGB1P19-201ENST00000517578 WDR4P57081 412 aaKnown RBP6.92□□□□□ -1.3
HMGB1P19-201ENST00000517578 TUSC1Q2TAM9 212 aa6.92□□□□□ -1.3
HMGB1P19-201ENST00000517578 DIEXFQ68CQ4 756 aaKnown RBP6.92□□□□□ -1.3
HMGB1P19-201ENST00000517578 LILRB3O75022 631 aa6.91□□□□□ -1.3
HMGB1P19-201ENST00000517578 NEFLP07196 543 aa6.91□□□□□ -1.3
HMGB1P19-201ENST00000517578 NR3C2P08235 984 aa6.91□□□□□ -1.3
HMGB1P19-201ENST00000517578 GMPRP36959 345 aa6.91□□□□□ -1.3
HMGB1P19-201ENST00000517578 GLIPR1L2Q4G1C9 344 aa6.91□□□□□ -1.3
HMGB1P19-201ENST00000517578 NPAS3Q8IXF0 933 aa6.91□□□□□ -1.3
HMGB1P19-201ENST00000517578 CCER1Q8TC90 406 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P19-201ENST00000517578 SLC16A10Q8TF71 515 aa6.91□□□□□ -1.3
HMGB1P19-201ENST00000517578 H3BM21 787 aa6.9□□□□□ -1.3
HMGB1P19-201ENST00000517578 LORP23490 312 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P19-201ENST00000517578 PURBQ96QR8 312 aaKnown RBP6.9□□□□□ -1.3
HMGB1P19-201ENST00000517578 GPBP1L1Q9HC44 474 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P19-201ENST00000517578 GRM5P41594 1212 aa6.89□□□□□ -1.31
HMGB1P19-201ENST00000517578 ARID5BQ14865 1188 aa6.89□□□□□ -1.31
HMGB1P19-201ENST00000517578 SH3RF1Q7Z6J0 888 aa6.89□□□□□ -1.31
HMGB1P19-201ENST00000517578 TSC1Q92574 1164 aa6.89□□□□□ -1.31
HMGB1P19-201ENST00000517578 ITPKCQ96DU7 683 aa6.89□□□□□ -1.31
HMGB1P19-201ENST00000517578 ZFAND3Q9H8U3 227 aa6.89□□□□□ -1.31
HMGB1P19-201ENST00000517578 ERBB4Q15303 1308 aa6.89□□□□□ -1.31
HMGB1P19-201ENST00000517578 NUTM2BA6NNL0 878 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P19-201ENST00000517578 SOBPA7XYQ1 873 aa6.88□□□□□ -1.31
HMGB1P19-201ENST00000517578 NUTM2EB1AL46 878 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P19-201ENST00000517578 ZIC2O95409 532 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P19-201ENST00000517578 RTL5Q5HYW3 569 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P19-201ENST00000517578 NUTM2DQ5VT03 806 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P19-201ENST00000517578 BPHLQ86WA6 291 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P19-201ENST00000517578 NUTM2AQ8IVF1 878 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P19-201ENST00000517578 IRF7Q92985 503 aa6.88□□□□□ -1.31
HMGB1P19-201ENST00000517578 C1QTNF2Q9BXJ5 285 aa6.88□□□□□ -1.31
HMGB1P19-201ENST00000517578 PODXL2Q9NZ53 605 aa6.88□□□□□ -1.31
HMGB1P19-201ENST00000517578 NR5A1Q13285 461 aa6.87□□□□□ -1.31
HMGB1P19-201ENST00000517578 SCARF1Q14162 830 aa6.87□□□□□ -1.31
HMGB1P19-201ENST00000517578 AGERQ15109 404 aa6.87□□□□□ -1.31
HMGB1P19-201ENST00000517578 NEUROD2Q15784 382 aa6.87□□□□□ -1.31
HMGB1P19-201ENST00000517578 KDM4CQ9H3R0 1056 aa6.87□□□□□ -1.31
HMGB1P19-201ENST00000517578 CLK2P49760 499 aaKnown RBP6.86□□□□□ -1.31
HMGB1P19-201ENST00000517578 SH3BP5LQ7L8J4 393 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms