RNA–Protein interactions for RNA: ENST00000517026.1

SCARNA21-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 139 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21-201ENST00000517026 TNS3Q68CZ2 1445 aa20.41■□□□□ 0.86
SCARNA21-201ENST00000517026 TOPAZ1Q8N9V7 1692 aa20.41■□□□□ 0.86
SCARNA21-201ENST00000517026 CABLES1Q8TDN4 633 aa20.39■□□□□ 0.85
SCARNA21-201ENST00000517026 ITSN1Q15811 1721 aa20.38■□□□□ 0.85
SCARNA21-201ENST00000517026 ADAMTS2O95450 1211 aa20.37■□□□□ 0.85
SCARNA21-201ENST00000517026 NUTM2GQ5VZR2 741 aa20.37■□□□□ 0.85
SCARNA21-201ENST00000517026 AFF2P51816 1311 aa20.36■□□□□ 0.85
SCARNA21-201ENST00000517026 ARHGEF10O15013 1369 aa20.35■□□□□ 0.85
SCARNA21-201ENST00000517026 CDCA8Q53HL2 280 aa20.35■□□□□ 0.85
SCARNA21-201ENST00000517026 ZNF692Q9BU19 519 aaPredicted RBP20.35■□□□□ 0.85
SCARNA21-201ENST00000517026 USP6P35125 1406 aa20.35■□□□□ 0.85
SCARNA21-201ENST00000517026 CPSF1Q10570 1443 aaKnown RBP20.35■□□□□ 0.85
SCARNA21-201ENST00000517026 C11orf95C9JLR9 678 aaPredicted RBP20.34■□□□□ 0.85
SCARNA21-201ENST00000517026 POLR3GLQ9BT43 218 aa20.34■□□□□ 0.85
SCARNA21-201ENST00000517026 ABTB2Q8N961 1025 aa20.33■□□□□ 0.85
SCARNA21-201ENST00000517026 RGS12O14924 1447 aa20.33■□□□□ 0.84
SCARNA21-201ENST00000517026 TRPM3Q9HCF6 1732 aaPredicted RBP20.33■□□□□ 0.84
SCARNA21-201ENST00000517026 KTN1Q86UP2 1357 aaKnown RBP20.33■□□□□ 0.84
SCARNA21-201ENST00000517026 CD163L1Q9NR16 1453 aa20.32■□□□□ 0.84
SCARNA21-201ENST00000517026 HDGFL2Q7Z4V5 671 aaPredicted RBP20.32■□□□□ 0.84
SCARNA21-201ENST00000517026 TERF2IPQ9NYB0 399 aa20.32■□□□□ 0.84
SCARNA21-201ENST00000517026 SSH2Q76I76 1423 aa20.32■□□□□ 0.84
SCARNA21-201ENST00000517026 TTC21BQ7Z4L5 1316 aa20.31■□□□□ 0.84
SCARNA21-201ENST00000517026 HAP1P54257 671 aaPredicted RBP20.31■□□□□ 0.84
SCARNA21-201ENST00000517026 C8orf37Q96NL8 207 aa20.31■□□□□ 0.84
SCARNA21-201ENST00000517026 EP400Q96L91 3159 aa20.3■□□□□ 0.84
SCARNA21-201ENST00000517026 A0A1W2PP64 1363 aa20.3■□□□□ 0.84
SCARNA21-201ENST00000517026 BRD4O60885 1362 aaPredicted RBP20.3■□□□□ 0.84
SCARNA21-201ENST00000517026 COL22A1Q8NFW1 1626 aaPredicted RBP20.29■□□□□ 0.84
SCARNA21-201ENST00000517026 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.29■□□□□ 0.84
SCARNA21-201ENST00000517026 NINLQ9Y2I6 1382 aa20.29■□□□□ 0.84
SCARNA21-201ENST00000517026 RBM6P78332 1123 aaKnown RBP20.28■□□□□ 0.84
SCARNA21-201ENST00000517026 QTRT2Q9H974 415 aaKnown RBP20.28■□□□□ 0.84
SCARNA21-201ENST00000517026 NLRP6P59044 892 aa20.27■□□□□ 0.84
SCARNA21-201ENST00000517026 NGLY1Q96IV0 654 aa20.27■□□□□ 0.84
SCARNA21-201ENST00000517026 ALS2Q96Q42 1657 aa20.26■□□□□ 0.83
SCARNA21-201ENST00000517026 ZRANB1Q9UGI0 708 aa20.26■□□□□ 0.83
SCARNA21-201ENST00000517026 NLRP13Q86W25 1043 aa20.25■□□□□ 0.83
SCARNA21-201ENST00000517026 NME9Q86XW9 330 aa20.25■□□□□ 0.83
SCARNA21-201ENST00000517026 TTC21AQ8NDW8 1320 aa20.25■□□□□ 0.83
SCARNA21-201ENST00000517026 ANKRD36BQ8N2N9 1353 aa20.24■□□□□ 0.83
SCARNA21-201ENST00000517026 USP19O94966 1318 aa20.23■□□□□ 0.83
SCARNA21-201ENST00000517026 KIF7Q2M1P5 1343 aa20.23■□□□□ 0.83
SCARNA21-201ENST00000517026 EDC4Q6P2E9 1401 aaKnown RBP20.22■□□□□ 0.83
SCARNA21-201ENST00000517026 FAM83GA6ND36 823 aa20.22■□□□□ 0.83
SCARNA21-201ENST00000517026 ZC3H6P61129 1189 aaKnown RBP20.22■□□□□ 0.83
SCARNA21-201ENST00000517026 CARD14Q9BXL6 1004 aa20.22■□□□□ 0.83
SCARNA21-201ENST00000517026 GCP02774 474 aa20.21■□□□□ 0.83
SCARNA21-201ENST00000517026 ZEB1P37275 1124 aaPredicted RBP20.21■□□□□ 0.83
SCARNA21-201ENST00000517026 AKAP12Q02952 1782 aa20.21■□□□□ 0.83
SCARNA21-201ENST00000517026 FNBP4Q8N3X1 1017 aaPredicted RBP20.2■□□□□ 0.82
SCARNA21-201ENST00000517026 SOX12O15370 315 aa20.19■□□□□ 0.82
SCARNA21-201ENST00000517026 USP21Q9UK80 565 aa20.19■□□□□ 0.82
SCARNA21-201ENST00000517026 CHRNA2Q15822 529 aa20.18■□□□□ 0.82
SCARNA21-201ENST00000517026 PRDM11Q9NQV5 511 aa20.18■□□□□ 0.82
SCARNA21-201ENST00000517026 KIAA0232Q92628 1395 aa20.18■□□□□ 0.82
SCARNA21-201ENST00000517026 NRKQ7Z2Y5 1582 aa20.17■□□□□ 0.82
SCARNA21-201ENST00000517026 MON2Q7Z3U7 1717 aa20.17■□□□□ 0.82
SCARNA21-201ENST00000517026 PANK3Q9H999 370 aa20.17■□□□□ 0.82
SCARNA21-201ENST00000517026 USP31Q70CQ4 1352 aa20.17■□□□□ 0.82
SCARNA21-201ENST00000517026 PIK3C2AO00443 1686 aa20.16■□□□□ 0.82
SCARNA21-201ENST00000517026 WASHC2AQ641Q2 1341 aa20.16■□□□□ 0.82
SCARNA21-201ENST00000517026 ZBTB7CA1YPR0 619 aa20.15■□□□□ 0.82
SCARNA21-201ENST00000517026 FYB1O15117 783 aa20.15■□□□□ 0.82
SCARNA21-201ENST00000517026 CCDC7Q96M83 1385 aa20.15■□□□□ 0.82
SCARNA21-201ENST00000517026 ATRNO75882 1429 aa20.15■□□□□ 0.82
SCARNA21-201ENST00000517026 NSD3Q9BZ95 1437 aa20.15■□□□□ 0.82
SCARNA21-201ENST00000517026 ABCA3Q99758 1704 aa20.14■□□□□ 0.81
SCARNA21-201ENST00000517026 MYOM1P52179 1685 aa20.14■□□□□ 0.81
SCARNA21-201ENST00000517026 BCL9LQ86UU0 1499 aa20.14■□□□□ 0.81
SCARNA21-201ENST00000517026 GGNBP2Q9H3C7 697 aa20.14■□□□□ 0.81
SCARNA21-201ENST00000517026 SLIT2O94813 1529 aa20.13■□□□□ 0.81
SCARNA21-201ENST00000517026 UNC5CLQ8IV45 518 aa20.13■□□□□ 0.81
SCARNA21-201ENST00000517026 BTG4Q9NY30 223 aa20.13■□□□□ 0.81
SCARNA21-201ENST00000517026 CRYBG1Q9Y4K1 1723 aa20.13■□□□□ 0.81
SCARNA21-201ENST00000517026 KCNH5Q8NCM2 988 aa20.12■□□□□ 0.81
SCARNA21-201ENST00000517026 COG3Q96JB2 828 aa20.12■□□□□ 0.81
SCARNA21-201ENST00000517026 SLIT3O75094 1523 aa20.12■□□□□ 0.81
SCARNA21-201ENST00000517026 CPDO75976 1380 aa20.11■□□□□ 0.81
SCARNA21-201ENST00000517026 TRPC5Q9UL62 973 aaPredicted RBP20.11■□□□□ 0.81
SCARNA21-201ENST00000517026 PHRF1Q9P1Y6 1649 aaKnown RBP20.1■□□□□ 0.81
SCARNA21-201ENST00000517026 FBLN1P23142 703 aa20.1■□□□□ 0.81
SCARNA21-201ENST00000517026 ARHGEF25Q86VW2 580 aa20.1■□□□□ 0.81
SCARNA21-201ENST00000517026 OVOS2A0A0J9YW53 1432 aa20.1■□□□□ 0.81
SCARNA21-201ENST00000517026 OVOS2Q6IE36 1432 aa20.1■□□□□ 0.81
SCARNA21-201ENST00000517026 STRN4Q9NRL3 753 aa20.07■□□□□ 0.8
SCARNA21-201ENST00000517026 MARF1Q9Y4F3 1742 aaKnown RBP20.07■□□□□ 0.8
SCARNA21-201ENST00000517026 CGNL1Q0VF96 1302 aa20.06■□□□□ 0.8
SCARNA21-201ENST00000517026 AXIN2Q9Y2T1 843 aa20.06■□□□□ 0.8
SCARNA21-201ENST00000517026 NFAT5O94916 1531 aa20.06■□□□□ 0.8
SCARNA21-201ENST00000517026 VPS72Q15906 364 aa20.05■□□□□ 0.8
SCARNA21-201ENST00000517026 CCDC9Q9Y3X0 531 aaKnown RBP20.05■□□□□ 0.8
SCARNA21-201ENST00000517026 AATKQ6ZMQ8 1374 aa20.05■□□□□ 0.8
SCARNA21-201ENST00000517026 EVA1CP58658 441 aa20.04■□□□□ 0.8
SCARNA21-201ENST00000517026 GJD4Q96KN9 370 aaPredicted RBP20.04■□□□□ 0.8
SCARNA21-201ENST00000517026 KNSTRNQ9Y448 316 aa20.04■□□□□ 0.8
SCARNA21-201ENST00000517026 COL14A1Q05707 1796 aaKnown RBP20.03■□□□□ 0.8
SCARNA21-201ENST00000517026 CAMTA1Q9Y6Y1 1673 aa20.03■□□□□ 0.8
SCARNA21-201ENST00000517026 PER1O15534 1290 aaPredicted RBP20.02■□□□□ 0.8
SCARNA21-201ENST00000517026 PLCH1Q4KWH8 1693 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms