RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 MKL2Q9ULH7 1088 aa3□□□□□ -1.93
RNU6-539P-201ENST00000516665 BMP2P12643 396 aa2.99□□□□□ -1.93
RNU6-539P-201ENST00000516665 TAL1P17542 331 aaPredicted RBP2.99□□□□□ -1.93
RNU6-539P-201ENST00000516665 GATA4P43694 442 aa2.99□□□□□ -1.93
RNU6-539P-201ENST00000516665 NNTQ13423 1086 aa2.99□□□□□ -1.93
RNU6-539P-201ENST00000516665 FBLN7Q53RD9 439 aa2.99□□□□□ -1.93
RNU6-539P-201ENST00000516665 CERKQ8TCT0 537 aa2.99□□□□□ -1.93
RNU6-539P-201ENST00000516665 ADH1CP00326 375 aa2.98□□□□□ -1.93
RNU6-539P-201ENST00000516665 SLC10A3P09131 477 aa2.98□□□□□ -1.93
RNU6-539P-201ENST00000516665 FECHP22830 423 aa2.98□□□□□ -1.93
RNU6-539P-201ENST00000516665 EHBP1Q8NDI1 1231 aa2.98□□□□□ -1.93
RNU6-539P-201ENST00000516665 EYA1Q99502 592 aa2.98□□□□□ -1.93
RNU6-539P-201ENST00000516665 TPSG1Q9NRR2 321 aa2.98□□□□□ -1.93
RNU6-539P-201ENST00000516665 TLL2Q9Y6L7 1015 aa2.98□□□□□ -1.93
RNU6-539P-201ENST00000516665 IGF1RP08069 1367 aa2.98□□□□□ -1.93
RNU6-539P-201ENST00000516665 PRIM1P49642 420 aaKnown RBP2.97□□□□□ -1.93
RNU6-539P-201ENST00000516665 ZNF800Q2TB10 664 aaPredicted RBP eCLIP2.97□□□□□ -1.93
RNU6-539P-201ENST00000516665 RIC3Q7Z5B4 369 aa2.97□□□□□ -1.93
RNU6-539P-201ENST00000516665 KLF16Q9BXK1 252 aaPredicted RBP2.97□□□□□ -1.93
RNU6-539P-201ENST00000516665 TAOK2Q9UL54 1235 aa2.97□□□□□ -1.93
RNU6-539P-201ENST00000516665 JAG2Q9Y219 1238 aa2.97□□□□□ -1.93
RNU6-539P-201ENST00000516665 SLC35F4A4IF30 521 aa2.96□□□□□ -1.94
RNU6-539P-201ENST00000516665 PSPNO60542 156 aa2.96□□□□□ -1.94
RNU6-539P-201ENST00000516665 IRAK1P51617 712 aa2.96□□□□□ -1.94
RNU6-539P-201ENST00000516665 TTC13Q8NBP0 860 aa2.96□□□□□ -1.94
RNU6-539P-201ENST00000516665 ZFAND3Q9H8U3 227 aa2.96□□□□□ -1.94
RNU6-539P-201ENST00000516665 CDHR5Q9HBB8 845 aa2.96□□□□□ -1.94
RNU6-539P-201ENST00000516665 RBM27Q9P2N5 1060 aaKnown RBP2.96□□□□□ -1.94
RNU6-539P-201ENST00000516665 PADI6Q6TGC4 694 aa2.95□□□□□ -1.94
RNU6-539P-201ENST00000516665 LINC00528Q8N1L1 170 aa2.95□□□□□ -1.94
RNU6-539P-201ENST00000516665 FMNL1O95466 1100 aaPredicted RBP2.94□□□□□ -1.94
RNU6-539P-201ENST00000516665 SPOCD1Q6ZMY3 1216 aa2.94□□□□□ -1.94
RNU6-539P-201ENST00000516665 DDX27Q96GQ7 796 aaKnown RBP2.94□□□□□ -1.94
RNU6-539P-201ENST00000516665 MBIPQ9NS73 344 aa2.94□□□□□ -1.94
RNU6-539P-201ENST00000516665 FIGNL2A6NMB9 653 aa2.93□□□□□ -1.94
RNU6-539P-201ENST00000516665 SHISA8B8ZZ34 492 aa2.93□□□□□ -1.94
RNU6-539P-201ENST00000516665 ELNP15502 786 aa2.93□□□□□ -1.94
RNU6-539P-201ENST00000516665 PDE4AP27815 886 aa2.93□□□□□ -1.94
RNU6-539P-201ENST00000516665 RRAGCQ9HB90 399 aa2.93□□□□□ -1.94
RNU6-539P-201ENST00000516665 NCANO14594 1321 aa2.93□□□□□ -1.94
RNU6-539P-201ENST00000516665 OIP5O43482 229 aa2.92□□□□□ -1.94
RNU6-539P-201ENST00000516665 FKBP8Q14318 412 aa2.92□□□□□ -1.94
RNU6-539P-201ENST00000516665 MSS51Q4VC12 460 aa2.92□□□□□ -1.94
RNU6-539P-201ENST00000516665 MORN1Q5T089 497 aa2.92□□□□□ -1.94
RNU6-539P-201ENST00000516665 LARP6Q9BRS8 491 aaKnown RBP2.92□□□□□ -1.94
RNU6-539P-201ENST00000516665 TTLL8A6PVC2 850 aa2.91□□□□□ -1.94
RNU6-539P-201ENST00000516665 DPYSL4O14531 572 aa2.91□□□□□ -1.94
RNU6-539P-201ENST00000516665 ZIC2O95409 532 aaPredicted RBP2.91□□□□□ -1.94
RNU6-539P-201ENST00000516665 C8AP07357 584 aa2.91□□□□□ -1.94
RNU6-539P-201ENST00000516665 LINC00114Q6XXX2 140 aa2.91□□□□□ -1.94
RNU6-539P-201ENST00000516665 ITPKCQ96DU7 683 aa2.91□□□□□ -1.94
RNU6-539P-201ENST00000516665 TMEM134Q9H6X4 195 aa2.91□□□□□ -1.94
RNU6-539P-201ENST00000516665 LRRC4BQ9NT99 713 aa2.91□□□□□ -1.94
RNU6-539P-201ENST00000516665 PRRG2O14669 202 aa2.9□□□□□ -1.95
RNU6-539P-201ENST00000516665 UPP2O95045 317 aa2.9□□□□□ -1.95
RNU6-539P-201ENST00000516665 ZNF865P0CJ78 1059 aaPredicted RBP2.9□□□□□ -1.95
RNU6-539P-201ENST00000516665 HOXB4P17483 251 aaPredicted RBP2.9□□□□□ -1.95
RNU6-539P-201ENST00000516665 DNAJB2P25686 324 aa2.9□□□□□ -1.95
RNU6-539P-201ENST00000516665 BUD31P41223 144 aaPredicted RBP2.9□□□□□ -1.95
RNU6-539P-201ENST00000516665 CCDC24Q8N4L8 307 aa2.9□□□□□ -1.95
RNU6-539P-201ENST00000516665 SLC27A5Q9Y2P5 690 aa2.9□□□□□ -1.95
RNU6-539P-201ENST00000516665 MMP16P51512 607 aa2.89□□□□□ -1.95
RNU6-539P-201ENST00000516665 BRICD5Q6PL45 260 aa2.89□□□□□ -1.95
RNU6-539P-201ENST00000516665 RNF19BQ6ZMZ0 732 aa2.89□□□□□ -1.95
RNU6-539P-201ENST00000516665 CUEDC1Q9NWM3 386 aaPredicted RBP2.89□□□□□ -1.95
RNU6-539P-201ENST00000516665 GPR25O00155 361 aa2.88□□□□□ -1.95
RNU6-539P-201ENST00000516665 OGFOD2Q6N063 350 aa2.88□□□□□ -1.95
RNU6-539P-201ENST00000516665 MEIOBQ8N635 442 aa2.88□□□□□ -1.95
RNU6-539P-201ENST00000516665 MFSD10Q14728 455 aa2.87□□□□□ -1.95
RNU6-539P-201ENST00000516665 C1orf229Q6ZS94 237 aaPredicted RBP2.87□□□□□ -1.95
RNU6-539P-201ENST00000516665 SENP3-EIF4A1A0A087X0R7 540 aa2.86□□□□□ -1.95
RNU6-539P-201ENST00000516665 GNB5O14775 395 aa2.86□□□□□ -1.95
RNU6-539P-201ENST00000516665 OAS3Q9Y6K5 1087 aaKnown RBP2.86□□□□□ -1.95
RNU6-539P-201ENST00000516665 B8ZZF3 427 aa2.84□□□□□ -1.95
RNU6-539P-201ENST00000516665 SH3BP2P78314 561 aa2.84□□□□□ -1.95
RNU6-539P-201ENST00000516665 FUT2Q10981 343 aa2.84□□□□□ -1.95
RNU6-539P-201ENST00000516665 PCMTD2Q9NV79 361 aa2.84□□□□□ -1.95
RNU6-539P-201ENST00000516665 SALL2Q9Y467 1007 aaPredicted RBP2.84□□□□□ -1.95
RNU6-539P-201ENST00000516665 PLEKHG3A1L390 1219 aa2.83□□□□□ -1.96
RNU6-539P-201ENST00000516665 DXOO77932 396 aaKnown RBP2.83□□□□□ -1.96
RNU6-539P-201ENST00000516665 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
RNU6-539P-201ENST00000516665 GIGYF2Q6Y7W6 1299 aaKnown RBP2.83□□□□□ -1.96
RNU6-539P-201ENST00000516665 NR3C2P08235 984 aa2.82□□□□□ -1.96
RNU6-539P-201ENST00000516665 LSRQ86X29 649 aaPredicted RBP2.82□□□□□ -1.96
RNU6-539P-201ENST00000516665 TRIM52Q96A61 297 aa2.82□□□□□ -1.96
RNU6-539P-201ENST00000516665 OXCT2Q9BYC2 517 aaPredicted RBP2.82□□□□□ -1.96
RNU6-539P-201ENST00000516665 NPDC1Q9NQX5 325 aaPredicted RBP2.82□□□□□ -1.96
RNU6-539P-201ENST00000516665 NOP53Q9NZM5 478 aaKnown RBP2.82□□□□□ -1.96
RNU6-539P-201ENST00000516665 RCCD1A6NED2 376 aa2.81□□□□□ -1.96
RNU6-539P-201ENST00000516665 ZNF837Q96EG3 531 aaPredicted RBP2.81□□□□□ -1.96
RNU6-539P-201ENST00000516665 PTCRAQ6ISU1 281 aaPredicted RBP2.8□□□□□ -1.96
RNU6-539P-201ENST00000516665 TSEN34Q9BSV6 310 aaKnown RBP2.8□□□□□ -1.96
RNU6-539P-201ENST00000516665 RNF112Q9ULX5 631 aa2.8□□□□□ -1.96
RNU6-539P-201ENST00000516665 H2AFB1P0C5Y9 115 aa2.79□□□□□ -1.96
RNU6-539P-201ENST00000516665 H2AFB2P0C5Z0 115 aa2.79□□□□□ -1.96
RNU6-539P-201ENST00000516665 OSBPP22059 807 aa2.79□□□□□ -1.96
RNU6-539P-201ENST00000516665 AMPD1P23109 780 aa2.79□□□□□ -1.96
RNU6-539P-201ENST00000516665 ATP6V1AP38606 617 aa2.79□□□□□ -1.96
RNU6-539P-201ENST00000516665 LILRA6Q6PI73 481 aa2.79□□□□□ -1.96
RNU6-539P-201ENST00000516665 MPNDQ8N594 471 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms