RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 GLI3P10071 1580 aa8.56□□□□□ -1.04
SCARNA18.1-201ENST00000516330 EVC2Q86UK5 1308 aa8.56□□□□□ -1.04
SCARNA18.1-201ENST00000516330 USP6P35125 1406 aa8.56□□□□□ -1.04
SCARNA18.1-201ENST00000516330 SLIT3O75094 1523 aa8.56□□□□□ -1.04
SCARNA18.1-201ENST00000516330 PLEKHG3A1L390 1219 aa8.56□□□□□ -1.04
SCARNA18.1-201ENST00000516330 RXRBP28702 533 aa8.56□□□□□ -1.04
SCARNA18.1-201ENST00000516330 NUDT16Q96DE0 195 aaKnown RBP8.56□□□□□ -1.04
SCARNA18.1-201ENST00000516330 SIN3AQ96ST3 1273 aa8.56□□□□□ -1.04
SCARNA18.1-201ENST00000516330 TIMELESSQ9UNS1 1208 aa8.56□□□□□ -1.04
SCARNA18.1-201ENST00000516330 PIK3C2AO00443 1686 aa8.56□□□□□ -1.04
SCARNA18.1-201ENST00000516330 LMO7Q8WWI1 1683 aa8.56□□□□□ -1.04
SCARNA18.1-201ENST00000516330 ADAMTS2O95450 1211 aa8.55□□□□□ -1.04
SCARNA18.1-201ENST00000516330 XPCQ01831 940 aaPredicted RBP8.55□□□□□ -1.04
SCARNA18.1-201ENST00000516330 NGDNQ8NEJ9 315 aaKnown RBP8.55□□□□□ -1.04
SCARNA18.1-201ENST00000516330 USP21Q9UK80 565 aa8.55□□□□□ -1.04
SCARNA18.1-201ENST00000516330 USP19O94966 1318 aa8.54□□□□□ -1.04
SCARNA18.1-201ENST00000516330 CPDO75976 1380 aa8.54□□□□□ -1.04
SCARNA18.1-201ENST00000516330 HAP1P54257 671 aaPredicted RBP8.54□□□□□ -1.04
SCARNA18.1-201ENST00000516330 SRPK2P78362 688 aaKnown RBP8.54□□□□□ -1.04
SCARNA18.1-201ENST00000516330 NEUROD1Q13562 356 aa8.54□□□□□ -1.04
SCARNA18.1-201ENST00000516330 PMFBP1Q8TBY8 1022 aa8.54□□□□□ -1.04
SCARNA18.1-201ENST00000516330 CDK19Q9BWU1 502 aa8.54□□□□□ -1.04
SCARNA18.1-201ENST00000516330 SSH2Q76I76 1423 aa8.54□□□□□ -1.04
SCARNA18.1-201ENST00000516330 THSD7AQ9UPZ6 1657 aa8.53□□□□□ -1.04
SCARNA18.1-201ENST00000516330 PUS7Q96PZ0 661 aaKnown RBP8.53□□□□□ -1.04
SCARNA18.1-201ENST00000516330 CARD11Q9BXL7 1154 aa8.53□□□□□ -1.04
SCARNA18.1-201ENST00000516330 CPSF1Q10570 1443 aaKnown RBP8.53□□□□□ -1.04
SCARNA18.1-201ENST00000516330 ACEP12821 1306 aa8.53□□□□□ -1.04
SCARNA18.1-201ENST00000516330 UNC5CLQ8IV45 518 aa8.52□□□□□ -1.05
SCARNA18.1-201ENST00000516330 QTRT2Q9H974 415 aaKnown RBP8.52□□□□□ -1.05
SCARNA18.1-201ENST00000516330 NBPF8Q3BBV2 869 aa8.51□□□□□ -1.05
SCARNA18.1-201ENST00000516330 TTC21AQ8NDW8 1320 aa8.51□□□□□ -1.05
SCARNA18.1-201ENST00000516330 VPS72Q15906 364 aa8.5□□□□□ -1.05
SCARNA18.1-201ENST00000516330 EDC4Q6P2E9 1401 aaKnown RBP8.5□□□□□ -1.05
SCARNA18.1-201ENST00000516330 LMOD2Q6P5Q4 547 aa8.5□□□□□ -1.05
SCARNA18.1-201ENST00000516330 GJD4Q96KN9 370 aaPredicted RBP8.5□□□□□ -1.05
SCARNA18.1-201ENST00000516330 ZNF692Q9BU19 519 aaPredicted RBP8.5□□□□□ -1.05
SCARNA18.1-201ENST00000516330 WNK3Q9BYP7 1800 aa8.5□□□□□ -1.05
SCARNA18.1-201ENST00000516330 USP47Q96K76 1375 aa8.49□□□□□ -1.05
SCARNA18.1-201ENST00000516330 PAK3O75914 559 aaPredicted RBP8.49□□□□□ -1.05
SCARNA18.1-201ENST00000516330 NLRP13Q86W25 1043 aa8.49□□□□□ -1.05
SCARNA18.1-201ENST00000516330 CABP2Q9NPB3 220 aa8.49□□□□□ -1.05
SCARNA18.1-201ENST00000516330 CD163L1Q9NR16 1453 aa8.49□□□□□ -1.05
SCARNA18.1-201ENST00000516330 FAM208AQ9UK61 1670 aaKnown RBP8.49□□□□□ -1.05
SCARNA18.1-201ENST00000516330 NFAT5O94916 1531 aa8.49□□□□□ -1.05
SCARNA18.1-201ENST00000516330 PARP4Q9UKK3 1724 aaKnown RBP8.49□□□□□ -1.05
SCARNA18.1-201ENST00000516330 KIAA0232Q92628 1395 aa8.48□□□□□ -1.05
SCARNA18.1-201ENST00000516330 PRDM11Q9NQV5 511 aa8.48□□□□□ -1.05
SCARNA18.1-201ENST00000516330 COL5A2P05997 1499 aaPredicted RBP8.48□□□□□ -1.05
SCARNA18.1-201ENST00000516330 MYOM1P52179 1685 aa8.48□□□□□ -1.05
SCARNA18.1-201ENST00000516330 RGPD1P0DJD0 1748 aa8.48□□□□□ -1.05
SCARNA18.1-201ENST00000516330 USP31Q70CQ4 1352 aa8.48□□□□□ -1.05
SCARNA18.1-201ENST00000516330 KTN1Q86UP2 1357 aaKnown RBP8.48□□□□□ -1.05
SCARNA18.1-201ENST00000516330 BRWD3Q6RI45 1802 aa8.47□□□□□ -1.05
SCARNA18.1-201ENST00000516330 EP400Q96L91 3159 aa8.47□□□□□ -1.05
SCARNA18.1-201ENST00000516330 OVOS2A0A0J9YW53 1432 aa8.47□□□□□ -1.05
SCARNA18.1-201ENST00000516330 OVOS2Q6IE36 1432 aa8.47□□□□□ -1.05
SCARNA18.1-201ENST00000516330 ABTB2Q8N961 1025 aa8.47□□□□□ -1.05
SCARNA18.1-201ENST00000516330 CABLES1Q8TDN4 633 aa8.47□□□□□ -1.05
SCARNA18.1-201ENST00000516330 ANKRD36BQ8N2N9 1353 aa8.47□□□□□ -1.05
SCARNA18.1-201ENST00000516330 COL18A1P39060 1754 aa8.46□□□□□ -1.05
SCARNA18.1-201ENST00000516330 ONECUT3O60422 494 aaPredicted RBP8.46□□□□□ -1.06
SCARNA18.1-201ENST00000516330 KCNH5Q8NCM2 988 aa8.46□□□□□ -1.06
SCARNA18.1-201ENST00000516330 UPF1Q92900 1129 aaKnown RBP eCLIP8.46□□□□□ -1.06
SCARNA18.1-201ENST00000516330 CABP1Q9NZU7 370 aa8.46□□□□□ -1.06
SCARNA18.1-201ENST00000516330 LRRC37A3O60309 1634 aa8.46□□□□□ -1.06
SCARNA18.1-201ENST00000516330 CAMTA1Q9Y6Y1 1673 aa8.46□□□□□ -1.06
SCARNA18.1-201ENST00000516330 A0A1W2PP64 1363 aa8.46□□□□□ -1.06
SCARNA18.1-201ENST00000516330 AATKQ6ZMQ8 1374 aa8.46□□□□□ -1.06
SCARNA18.1-201ENST00000516330 BLMP54132 1417 aaPredicted RBP8.46□□□□□ -1.06
SCARNA18.1-201ENST00000516330 CRB1P82279 1406 aa8.46□□□□□ -1.06
SCARNA18.1-201ENST00000516330 CDCA8Q53HL2 280 aa8.45□□□□□ -1.06
SCARNA18.1-201ENST00000516330 CCDC125Q86Z20 511 aa8.45□□□□□ -1.06
SCARNA18.1-201ENST00000516330 TESK2Q96S53 571 aa8.45□□□□□ -1.06
SCARNA18.1-201ENST00000516330 BTG4Q9NY30 223 aa8.45□□□□□ -1.06
SCARNA18.1-201ENST00000516330 SPATA31A5Q5VU36 1347 aa8.45□□□□□ -1.06
SCARNA18.1-201ENST00000516330 TTC21BQ7Z4L5 1316 aa8.45□□□□□ -1.06
SCARNA18.1-201ENST00000516330 SPATA31A7Q8IWB4 1347 aa8.45□□□□□ -1.06
SCARNA18.1-201ENST00000516330 RGPD3A6NKT7 1758 aaPredicted RBP8.45□□□□□ -1.06
SCARNA18.1-201ENST00000516330 LTN1O94822 1766 aa8.45□□□□□ -1.06
SCARNA18.1-201ENST00000516330 RGPD4Q7Z3J3 1758 aa8.45□□□□□ -1.06
SCARNA18.1-201ENST00000516330 KIF20BQ96Q89 1820 aa8.45□□□□□ -1.06
SCARNA18.1-201ENST00000516330 TNS1Q9HBL0 1735 aaKnown RBP8.44□□□□□ -1.06
SCARNA18.1-201ENST00000516330 FAM83GA6ND36 823 aa8.44□□□□□ -1.06
SCARNA18.1-201ENST00000516330 GCP02774 474 aa8.44□□□□□ -1.06
SCARNA18.1-201ENST00000516330 HDGFL2Q7Z4V5 671 aaPredicted RBP8.44□□□□□ -1.06
SCARNA18.1-201ENST00000516330 TERF2IPQ9NYB0 399 aa8.44□□□□□ -1.06
SCARNA18.1-201ENST00000516330 THRAP3Q9Y2W1 955 aaKnown RBP8.44□□□□□ -1.06
SCARNA18.1-201ENST00000516330 DISP2A7MBM2 1401 aa8.44□□□□□ -1.06
SCARNA18.1-201ENST00000516330 TMF1P82094 1093 aa8.43□□□□□ -1.06
SCARNA18.1-201ENST00000516330 SPATA31A1Q5TZJ5 1347 aa8.43□□□□□ -1.06
SCARNA18.1-201ENST00000516330 ST20-MTHFSA0A0A6YYL1 179 aa8.42□□□□□ -1.06
SCARNA18.1-201ENST00000516330 C11orf95C9JLR9 678 aaPredicted RBP8.42□□□□□ -1.06
SCARNA18.1-201ENST00000516330 NLRP6P59044 892 aa8.42□□□□□ -1.06
SCARNA18.1-201ENST00000516330 BARGINQ6ZT62 677 aa8.42□□□□□ -1.06
SCARNA18.1-201ENST00000516330 PCGF6Q9BYE7 350 aa8.42□□□□□ -1.06
SCARNA18.1-201ENST00000516330 CCDC9Q9Y3X0 531 aaKnown RBP8.42□□□□□ -1.06
SCARNA18.1-201ENST00000516330 RTL1A6NKG5 1358 aa8.42□□□□□ -1.06
SCARNA18.1-201ENST00000516330 ANKRD26Q9UPS8 1709 aa8.42□□□□□ -1.06
SCARNA18.1-201ENST00000516330 CCDC7Q96M83 1385 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms