RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 VAC14Q08AM6 782 aa6.07□□□□□ -1.44
RNU6-390P-201ENST00000516259 CFAP70Q5T0N1 1121 aa6.07□□□□□ -1.44
RNU6-390P-201ENST00000516259 PDXDC2PQ6P474 469 aa6.07□□□□□ -1.44
RNU6-390P-201ENST00000516259 KRTAP3-3Q9BYR6 98 aa6.07□□□□□ -1.44
RNU6-390P-201ENST00000516259 KRTAP3-2Q9BYR7 98 aa6.07□□□□□ -1.44
RNU6-390P-201ENST00000516259 WBP1LQ9NX94 342 aa6.07□□□□□ -1.44
RNU6-390P-201ENST00000516259 USTQ9Y2C2 406 aa6.07□□□□□ -1.44
RNU6-390P-201ENST00000516259 CCNYL3P0C7X3 344 aa6.06□□□□□ -1.44
RNU6-390P-201ENST00000516259 SEMA3FQ13275 785 aa6.06□□□□□ -1.44
RNU6-390P-201ENST00000516259 FAM160A2Q8N612 972 aaPredicted RBP6.06□□□□□ -1.44
RNU6-390P-201ENST00000516259 SPSB2Q99619 263 aa6.06□□□□□ -1.44
RNU6-390P-201ENST00000516259 PALM3A6NDB9 673 aaPredicted RBP6.05□□□□□ -1.44
RNU6-390P-201ENST00000516259 PATL2C9JE40 543 aaKnown RBP6.05□□□□□ -1.44
RNU6-390P-201ENST00000516259 LZTS3O60299 673 aaPredicted RBP6.05□□□□□ -1.44
RNU6-390P-201ENST00000516259 KCNH2Q12809 1159 aa6.05□□□□□ -1.44
RNU6-390P-201ENST00000516259 ZBTB7CA1YPR0 619 aa6.04□□□□□ -1.44
RNU6-390P-201ENST00000516259 ZPR1O75312 459 aa6.04□□□□□ -1.44
RNU6-390P-201ENST00000516259 ADH1BP00325 375 aa6.04□□□□□ -1.44
RNU6-390P-201ENST00000516259 FBXO45P0C2W1 286 aa6.04□□□□□ -1.44
RNU6-390P-201ENST00000516259 PTK2Q05397 1052 aa6.04□□□□□ -1.44
RNU6-390P-201ENST00000516259 NBPF14Q5TI25 921 aa6.04□□□□□ -1.44
RNU6-390P-201ENST00000516259 NUDT12Q9BQG2 462 aa6.04□□□□□ -1.44
RNU6-390P-201ENST00000516259 ATG7O95352 703 aa6.03□□□□□ -1.44
RNU6-390P-201ENST00000516259 TRIM26Q12899 539 aaPredicted RBP6.03□□□□□ -1.44
RNU6-390P-201ENST00000516259 PLEKHM2Q8IWE5 1019 aa6.03□□□□□ -1.44
RNU6-390P-201ENST00000516259 RETREG2Q8NC44 543 aa6.03□□□□□ -1.44
RNU6-390P-201ENST00000516259 UCN2Q96RP3 112 aa6.03□□□□□ -1.44
RNU6-390P-201ENST00000516259 ATP9BO43861 1147 aa6.02□□□□□ -1.45
RNU6-390P-201ENST00000516259 ELOAQ14241 798 aaKnown RBP6.02□□□□□ -1.45
RNU6-390P-201ENST00000516259 CCDC125Q86Z20 511 aa6.02□□□□□ -1.45
RNU6-390P-201ENST00000516259 IL21Q9HBE4 155 aa6.02□□□□□ -1.45
RNU6-390P-201ENST00000516259 CHIC2Q9UKJ5 165 aa6.02□□□□□ -1.45
RNU6-390P-201ENST00000516259 MAFBQ9Y5Q3 323 aaPredicted RBP6.02□□□□□ -1.45
RNU6-390P-201ENST00000516259 TJAP1Q5JTD0 557 aa6.01□□□□□ -1.45
RNU6-390P-201ENST00000516259 PODXL2Q9NZ53 605 aa6.01□□□□□ -1.45
RNU6-390P-201ENST00000516259 MAP10Q9P2G4 905 aa6.01□□□□□ -1.45
RNU6-390P-201ENST00000516259 TFIP11Q9UBB9 837 aaKnown RBP6.01□□□□□ -1.45
RNU6-390P-201ENST00000516259 MTRQ99707 1265 aa6□□□□□ -1.45
RNU6-390P-201ENST00000516259 POTEMA6NI47 508 aa5.99□□□□□ -1.45
RNU6-390P-201ENST00000516259 BRD1O95696 1058 aa5.99□□□□□ -1.45
RNU6-390P-201ENST00000516259 CSB-PGBD3P0DP91 1061 aa5.99□□□□□ -1.45
RNU6-390P-201ENST00000516259 LMOD1P29536 600 aaPredicted RBP5.99□□□□□ -1.45
RNU6-390P-201ENST00000516259 CTHP32929 405 aa5.99□□□□□ -1.45
RNU6-390P-201ENST00000516259 MAP7D1Q3KQU3 841 aa5.99□□□□□ -1.45
RNU6-390P-201ENST00000516259 SH3BP5LQ7L8J4 393 aa5.99□□□□□ -1.45
RNU6-390P-201ENST00000516259 PHTF2Q8N3S3 785 aa5.99□□□□□ -1.45
RNU6-390P-201ENST00000516259 COPS2P61201 443 aa5.98□□□□□ -1.45
RNU6-390P-201ENST00000516259 TBC1D9Q6ZT07 1266 aa5.98□□□□□ -1.45
RNU6-390P-201ENST00000516259 SH3RF1Q7Z6J0 888 aa5.98□□□□□ -1.45
RNU6-390P-201ENST00000516259 KCTD12Q96CX2 325 aaKnown RBP5.98□□□□□ -1.45
RNU6-390P-201ENST00000516259 OCSTAMPQ9BR26 566 aa5.98□□□□□ -1.45
RNU6-390P-201ENST00000516259 SLC6A16Q9GZN6 736 aa5.98□□□□□ -1.45
RNU6-390P-201ENST00000516259 VRTNQ9H8Y1 702 aa5.98□□□□□ -1.45
RNU6-390P-201ENST00000516259 CEP126Q9P2H0 1117 aa5.98□□□□□ -1.45
RNU6-390P-201ENST00000516259 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.97□□□□□ -1.45
RNU6-390P-201ENST00000516259 KCNA1Q09470 495 aa5.97□□□□□ -1.45
RNU6-390P-201ENST00000516259 KANK4Q5T7N3 995 aaPredicted RBP5.97□□□□□ -1.45
RNU6-390P-201ENST00000516259 UNC93B1Q9H1C4 597 aa5.97□□□□□ -1.45
RNU6-390P-201ENST00000516259 CDV3Q9UKY7 258 aaKnown RBP5.96□□□□□ -1.46
RNU6-390P-201ENST00000516259 FAM196BA6NMK8 535 aa5.95□□□□□ -1.46
RNU6-390P-201ENST00000516259 RFX1P22670 979 aa5.95□□□□□ -1.46
RNU6-390P-201ENST00000516259 SLFNL1Q499Z3 407 aa5.95□□□□□ -1.46
RNU6-390P-201ENST00000516259 B4GALNT3Q6L9W6 998 aa5.95□□□□□ -1.46
RNU6-390P-201ENST00000516259 BPHLQ86WA6 291 aaPredicted RBP5.95□□□□□ -1.46
RNU6-390P-201ENST00000516259 ADAM32Q8TC27 787 aa5.95□□□□□ -1.46
RNU6-390P-201ENST00000516259 ARHGAP9Q9BRR9 750 aa5.95□□□□□ -1.46
RNU6-390P-201ENST00000516259 PRDM9Q9NQV7 894 aa5.95□□□□□ -1.46
RNU6-390P-201ENST00000516259 USP17L3A6NCW0 530 aa5.94□□□□□ -1.46
RNU6-390P-201ENST00000516259 USP17L4A6NCW7 530 aa5.94□□□□□ -1.46
RNU6-390P-201ENST00000516259 TMEM88BA6NKF7 163 aa5.94□□□□□ -1.46
RNU6-390P-201ENST00000516259 USP17L5A8MUK1 530 aa5.94□□□□□ -1.46
RNU6-390P-201ENST00000516259 ATP5J2-PTCD1G3V325 749 aa5.94□□□□□ -1.46
RNU6-390P-201ENST00000516259 ITGBL1O95965 494 aaPredicted RBP5.94□□□□□ -1.46
RNU6-390P-201ENST00000516259 RNF20Q5VTR2 975 aa5.94□□□□□ -1.46
RNU6-390P-201ENST00000516259 USP17L2Q6R6M4 530 aa5.94□□□□□ -1.46
RNU6-390P-201ENST00000516259 USP17L1Q7RTZ2 530 aa5.94□□□□□ -1.46
RNU6-390P-201ENST00000516259 CDAN1Q8IWY9 1227 aa5.94□□□□□ -1.46
RNU6-390P-201ENST00000516259 TRMT44Q8IYL2 757 aaKnown RBP5.94□□□□□ -1.46
RNU6-390P-201ENST00000516259 SEPT12Q8IYM1 358 aa5.94□□□□□ -1.46
RNU6-390P-201ENST00000516259 C1QTNF2Q9BXJ5 285 aa5.94□□□□□ -1.46
RNU6-390P-201ENST00000516259 PCDH10Q9P2E7 1040 aa5.94□□□□□ -1.46
RNU6-390P-201ENST00000516259 CCDC9Q9Y3X0 531 aaKnown RBP5.94□□□□□ -1.46
RNU6-390P-201ENST00000516259 TLL1O43897 1013 aa5.93□□□□□ -1.46
RNU6-390P-201ENST00000516259 PTCRAQ6ISU1 281 aaPredicted RBP5.93□□□□□ -1.46
RNU6-390P-201ENST00000516259 ZBTB33Q86T24 672 aa5.93□□□□□ -1.46
RNU6-390P-201ENST00000516259 ZNF516Q92618 1163 aa5.93□□□□□ -1.46
RNU6-390P-201ENST00000516259 TRIM52Q96A61 297 aa5.93□□□□□ -1.46
RNU6-390P-201ENST00000516259 SKIP12755 728 aa5.92□□□□□ -1.46
RNU6-390P-201ENST00000516259 TRAF7Q6Q0C0 670 aa5.92□□□□□ -1.46
RNU6-390P-201ENST00000516259 TRIM50Q86XT4 487 aa5.92□□□□□ -1.46
RNU6-390P-201ENST00000516259 RNF135Q8IUD6 432 aa5.92□□□□□ -1.46
RNU6-390P-201ENST00000516259 ZNF511Q8NB15 262 aa5.92□□□□□ -1.46
RNU6-390P-201ENST00000516259 FAM174AQ8TBP5 190 aa5.92□□□□□ -1.46
RNU6-390P-201ENST00000516259 HCSTQ9UBK5 93 aa5.92□□□□□ -1.46
RNU6-390P-201ENST00000516259 PCDHB9Q9Y5E1 797 aa5.92□□□□□ -1.46
RNU6-390P-201ENST00000516259 ESPNB1AK53 854 aa5.91□□□□□ -1.46
RNU6-390P-201ENST00000516259 PIK3CDO00329 1044 aa5.91□□□□□ -1.46
RNU6-390P-201ENST00000516259 WNT7BP56706 349 aa5.91□□□□□ -1.46
RNU6-390P-201ENST00000516259 NBPF20Q3BBV1 942 aa5.91□□□□□ -1.46
RNU6-390P-201ENST00000516259 POTEGQ6S5H5 508 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms