RNA–Protein interactions for RNA: ENST00000515585.1

ABCC3-216, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3

Gene ABCC3, Length 484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-216ENST00000515585 USP6P35125 1406 aa18.71■□□□□ 0.59
ABCC3-216ENST00000515585 DCCP43146 1447 aa18.71■□□□□ 0.59
ABCC3-216ENST00000515585 MARF1Q9Y4F3 1742 aaKnown RBP18.71■□□□□ 0.59
ABCC3-216ENST00000515585 ZNF692Q9BU19 519 aaPredicted RBP18.7■□□□□ 0.58
ABCC3-216ENST00000515585 FYB1O15117 783 aa18.69■□□□□ 0.58
ABCC3-216ENST00000515585 KIF1AQ12756 1690 aa18.68■□□□□ 0.58
ABCC3-216ENST00000515585 ACEP12821 1306 aa18.67■□□□□ 0.58
ABCC3-216ENST00000515585 PIK3C2AO00443 1686 aa18.66■□□□□ 0.58
ABCC3-216ENST00000515585 MAP2P11137 1827 aaKnown RBP18.66■□□□□ 0.58
ABCC3-216ENST00000515585 CNGB1Q14028 1251 aaPredicted RBP18.66■□□□□ 0.58
ABCC3-216ENST00000515585 YTHDC1Q96MU7 727 aaKnown RBP18.66■□□□□ 0.58
ABCC3-216ENST00000515585 SRCAPQ6ZRS2 3230 aa18.66■□□□□ 0.58
ABCC3-216ENST00000515585 UPF1Q92900 1129 aaKnown RBP eCLIP18.65■□□□□ 0.58
ABCC3-216ENST00000515585 TMEM94Q12767 1356 aa18.65■□□□□ 0.58
ABCC3-216ENST00000515585 OVOS2A0A0J9YW53 1432 aa18.65■□□□□ 0.58
ABCC3-216ENST00000515585 OVOS2Q6IE36 1432 aa18.65■□□□□ 0.58
ABCC3-216ENST00000515585 PROSER2Q86WR7 435 aaPredicted RBP18.64■□□□□ 0.57
ABCC3-216ENST00000515585 SMG6Q86US8 1419 aaKnown RBP18.64■□□□□ 0.57
ABCC3-216ENST00000515585 COL3A1P02461 1466 aaPredicted RBP18.64■□□□□ 0.57
ABCC3-216ENST00000515585 TRPM3Q9HCF6 1732 aaPredicted RBP18.63■□□□□ 0.57
ABCC3-216ENST00000515585 MORC1Q86VD1 984 aa18.63■□□□□ 0.57
ABCC3-216ENST00000515585 BLMP54132 1417 aaPredicted RBP18.63■□□□□ 0.57
ABCC3-216ENST00000515585 MST1RQ04912 1400 aa18.63■□□□□ 0.57
ABCC3-216ENST00000515585 TTC21BQ7Z4L5 1316 aa18.62■□□□□ 0.57
ABCC3-216ENST00000515585 C1orf167Q5SNV9 1468 aa18.62■□□□□ 0.57
ABCC3-216ENST00000515585 USP31Q70CQ4 1352 aa18.61■□□□□ 0.57
ABCC3-216ENST00000515585 RBM33Q96EV2 1170 aaKnown RBP18.61■□□□□ 0.57
ABCC3-216ENST00000515585 GGNBP2Q9H3C7 697 aa18.61■□□□□ 0.57
ABCC3-216ENST00000515585 C19orf44Q9H6X5 657 aa18.61■□□□□ 0.57
ABCC3-216ENST00000515585 AATKQ6ZMQ8 1374 aa18.6■□□□□ 0.57
ABCC3-216ENST00000515585 TTC21AQ8NDW8 1320 aa18.6■□□□□ 0.57
ABCC3-216ENST00000515585 NUTM2FA1L443 756 aa18.59■□□□□ 0.57
ABCC3-216ENST00000515585 PNPLA6Q8IY17 1366 aa18.58■□□□□ 0.57
ABCC3-216ENST00000515585 CENPBP07199 599 aaPredicted RBP18.58■□□□□ 0.56
ABCC3-216ENST00000515585 FAM9BQ8IZU0 186 aa18.58■□□□□ 0.56
ABCC3-216ENST00000515585 NME9Q86XW9 330 aa18.57■□□□□ 0.56
ABCC3-216ENST00000515585 PHF8Q9UPP1 1060 aa18.57■□□□□ 0.56
ABCC3-216ENST00000515585 ALS2Q96Q42 1657 aa18.56■□□□□ 0.56
ABCC3-216ENST00000515585 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.55■□□□□ 0.56
ABCC3-216ENST00000515585 PMFBP1Q8TBY8 1022 aa18.55■□□□□ 0.56
ABCC3-216ENST00000515585 CDK12Q9NYV4 1490 aaPredicted RBP18.54■□□□□ 0.56
ABCC3-216ENST00000515585 PEAK1Q9H792 1746 aa18.54■□□□□ 0.56
ABCC3-216ENST00000515585 MTHFSP49914 203 aa18.53■□□□□ 0.56
ABCC3-216ENST00000515585 NGDNQ8NEJ9 315 aaKnown RBP18.53■□□□□ 0.56
ABCC3-216ENST00000515585 ZRANB1Q9UGI0 708 aa18.53■□□□□ 0.56
ABCC3-216ENST00000515585 MSH6P52701 1360 aa18.53■□□□□ 0.56
ABCC3-216ENST00000515585 ZBED9Q6R2W3 1325 aa18.52■□□□□ 0.56
ABCC3-216ENST00000515585 PHRF1Q9P1Y6 1649 aaKnown RBP18.52■□□□□ 0.55
ABCC3-216ENST00000515585 HNRNPUQ00839 825 aaKnown RBP eCLIP18.51■□□□□ 0.556e-7■■■□□ 18.3
ABCC3-216ENST00000515585 C14orf37Q86TY3 774 aa18.51■□□□□ 0.55
ABCC3-216ENST00000515585 JCADQ9P266 1359 aa18.51■□□□□ 0.55
ABCC3-216ENST00000515585 ZNF772Q68DY9 489 aaPredicted RBP18.5■□□□□ 0.55
ABCC3-216ENST00000515585 CADPS2Q86UW7 1296 aa18.5■□□□□ 0.55
ABCC3-216ENST00000515585 COG3Q96JB2 828 aa18.5■□□□□ 0.55
ABCC3-216ENST00000515585 CRYBG1Q9Y4K1 1723 aa18.49■□□□□ 0.55
ABCC3-216ENST00000515585 ORAI2Q96SN7 254 aa18.49■□□□□ 0.55
ABCC3-216ENST00000515585 POLKQ9UBT6 870 aa18.49■□□□□ 0.55
ABCC3-216ENST00000515585 ADAMTS8Q9UP79 889 aa18.49■□□□□ 0.55
ABCC3-216ENST00000515585 RGPD1P0DJD0 1748 aa18.49■□□□□ 0.55
ABCC3-216ENST00000515585 SLIT3O75094 1523 aa18.49■□□□□ 0.55
ABCC3-216ENST00000515585 TNNT2P45379 298 aaPredicted RBP18.48■□□□□ 0.55
ABCC3-216ENST00000515585 ESCO1Q5FWF5 840 aa18.48■□□□□ 0.55
ABCC3-216ENST00000515585 NFAT5O94916 1531 aa18.48■□□□□ 0.55
ABCC3-216ENST00000515585 PXDNQ92626 1479 aa18.47■□□□□ 0.55
ABCC3-216ENST00000515585 ATF3P18847 181 aa18.47■□□□□ 0.55
ABCC3-216ENST00000515585 SLAIN2Q9P270 581 aa18.47■□□□□ 0.55
ABCC3-216ENST00000515585 NHSL1Q5SYE7 1610 aa18.47■□□□□ 0.55
ABCC3-216ENST00000515585 LTN1O94822 1766 aa18.47■□□□□ 0.55
ABCC3-216ENST00000515585 RXRBP28702 533 aa18.45■□□□□ 0.54
ABCC3-216ENST00000515585 MEX3CQ5U5Q3 659 aaKnown RBP18.45■□□□□ 0.54
ABCC3-216ENST00000515585 CFAP53Q96M91 514 aa18.45■□□□□ 0.54
ABCC3-216ENST00000515585 WDR43Q15061 677 aaKnown RBP eCLIP18.44■□□□□ 0.54
ABCC3-216ENST00000515585 ROBO1Q9Y6N7 1651 aa18.43■□□□□ 0.54
ABCC3-216ENST00000515585 SBNO1A3KN83 1393 aa18.42■□□□□ 0.54
ABCC3-216ENST00000515585 KIF24Q5T7B8 1368 aa18.42■□□□□ 0.54
ABCC3-216ENST00000515585 FBLN1P23142 703 aa18.42■□□□□ 0.54
ABCC3-216ENST00000515585 EMILIN1Q9Y6C2 1016 aa18.42■□□□□ 0.54
ABCC3-216ENST00000515585 USP19O94966 1318 aa18.41■□□□□ 0.54
ABCC3-216ENST00000515585 SPATA31A6Q5VVP1 1343 aa18.41■□□□□ 0.54
ABCC3-216ENST00000515585 FOXO3O43524 673 aa18.39■□□□□ 0.53
ABCC3-216ENST00000515585 PSME1Q06323 249 aa18.39■□□□□ 0.53
ABCC3-216ENST00000515585 NCBP3Q53F19 620 aaKnown RBP18.38■□□□□ 0.53
ABCC3-216ENST00000515585 KRT28Q7Z3Y7 464 aa18.38■□□□□ 0.53
ABCC3-216ENST00000515585 ZNF521Q96K83 1311 aa18.38■□□□□ 0.53
ABCC3-216ENST00000515585 DIAPH1O60610 1272 aaKnown RBP18.37■□□□□ 0.53
ABCC3-216ENST00000515585 IL13P35225 146 aa18.37■□□□□ 0.53
ABCC3-216ENST00000515585 NLRP6P59044 892 aa18.37■□□□□ 0.53
ABCC3-216ENST00000515585 RRS1Q15050 365 aaKnown RBP18.37■□□□□ 0.53
ABCC3-216ENST00000515585 BRINP3Q76B58 766 aa18.37■□□□□ 0.53
ABCC3-216ENST00000515585 ABTB2Q8N961 1025 aa18.37■□□□□ 0.53
ABCC3-216ENST00000515585 NPHP3Q7Z494 1330 aa18.37■□□□□ 0.53
ABCC3-216ENST00000515585 ABCA3Q99758 1704 aa18.37■□□□□ 0.53
ABCC3-216ENST00000515585 RTL1A6NKG5 1358 aa18.36■□□□□ 0.53
ABCC3-216ENST00000515585 LRP6O75581 1613 aa18.36■□□□□ 0.53
ABCC3-216ENST00000515585 FLT4P35916 1363 aa18.36■□□□□ 0.53
ABCC3-216ENST00000515585 MAP3K19Q56UN5 1328 aa18.36■□□□□ 0.53
ABCC3-216ENST00000515585 TNS3Q68CZ2 1445 aa18.36■□□□□ 0.53
ABCC3-216ENST00000515585 NGEFQ8N5V2 710 aa18.36■□□□□ 0.53
ABCC3-216ENST00000515585 COL18A1P39060 1754 aa18.35■□□□□ 0.53
ABCC3-216ENST00000515585 SOS2Q07890 1332 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms