RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 PSDA5PKW4 1024 aaPredicted RBP10.28□□□□□ -0.76
NPHP3-211ENST00000515289 ZBBXA8MT70 800 aa10.28□□□□□ -0.76
NPHP3-211ENST00000515289 SMAPO00193 183 aa10.28□□□□□ -0.76
NPHP3-211ENST00000515289 FBXO45P0C2W1 286 aa10.28□□□□□ -0.76
NPHP3-211ENST00000515289 PTK7Q13308 1070 aa10.28□□□□□ -0.76
NPHP3-211ENST00000515289 LARP1Q6PKG0 1096 aaKnown RBP10.28□□□□□ -0.76
NPHP3-211ENST00000515289 FAM200AQ8TCP9 573 aa10.28□□□□□ -0.76
NPHP3-211ENST00000515289 CDCA7Q9BWT1 371 aaPredicted RBP10.28□□□□□ -0.76
NPHP3-211ENST00000515289 ANKRD33BA6NCL7 494 aa10.27□□□□□ -0.77
NPHP3-211ENST00000515289 ATP2B4P23634 1241 aa10.27□□□□□ -0.77
NPHP3-211ENST00000515289 ZNF326Q5BKZ1 582 aaKnown RBP10.27□□□□□ -0.77
NPHP3-211ENST00000515289 ARSIQ5FYB1 569 aa10.27□□□□□ -0.77
NPHP3-211ENST00000515289 DESI1Q6ICB0 168 aa10.27□□□□□ -0.77
NPHP3-211ENST00000515289 KHSRPQ92945 711 aaKnown RBP eCLIP10.27□□□□□ -0.77
NPHP3-211ENST00000515289 DRC1Q96MC2 740 aa10.27□□□□□ -0.77
NPHP3-211ENST00000515289 MKRN1Q9UHC7 482 aaKnown RBP10.27□□□□□ -0.77
NPHP3-211ENST00000515289 SREK1Q8WXA9 508 aaKnown RBP10.26□□□□□ -0.77
NPHP3-211ENST00000515289 ZSWIM6Q9HCJ5 1215 aa10.26□□□□□ -0.77
NPHP3-211ENST00000515289 BIN2Q9UBW5 565 aaPredicted RBP10.26□□□□□ -0.77
NPHP3-211ENST00000515289 ATP5J2-PTCD1G3V325 749 aa10.25□□□□□ -0.77
NPHP3-211ENST00000515289 FUT2Q10981 343 aa10.25□□□□□ -0.77
NPHP3-211ENST00000515289 SWI5Q1ZZU3 235 aa10.25□□□□□ -0.77
NPHP3-211ENST00000515289 C1orf216Q8TAB5 229 aa10.25□□□□□ -0.77
NPHP3-211ENST00000515289 RASA1P20936 1047 aa10.24□□□□□ -0.77
NPHP3-211ENST00000515289 CANXP27824 592 aaKnown RBP10.24□□□□□ -0.77
NPHP3-211ENST00000515289 DOK7Q18PE1 504 aa10.24□□□□□ -0.77
NPHP3-211ENST00000515289 SWT1Q5T5J6 900 aaKnown RBP10.24□□□□□ -0.77
NPHP3-211ENST00000515289 RETREG3Q86VR2 466 aa10.24□□□□□ -0.77
NPHP3-211ENST00000515289 DEPDC4Q8N2C3 294 aa10.24□□□□□ -0.77
NPHP3-211ENST00000515289 FAM174AQ8TBP5 190 aa10.24□□□□□ -0.77
NPHP3-211ENST00000515289 LZTS3O60299 673 aaPredicted RBP10.23□□□□□ -0.77
NPHP3-211ENST00000515289 EVX2Q03828 476 aa10.23□□□□□ -0.77
NPHP3-211ENST00000515289 ANKMY2Q8IV38 441 aa10.23□□□□□ -0.77
NPHP3-211ENST00000515289 SYMPKQ92797 1274 aaKnown RBP10.23□□□□□ -0.77
NPHP3-211ENST00000515289 LHX6Q9UPM6 363 aa10.23□□□□□ -0.77
NPHP3-211ENST00000515289 HAX1O00165 279 aa10.22□□□□□ -0.77
NPHP3-211ENST00000515289 ZC3H6P61129 1189 aaKnown RBP10.22□□□□□ -0.77
NPHP3-211ENST00000515289 GPR153Q6NV75 609 aa10.22□□□□□ -0.77
NPHP3-211ENST00000515289 EGFL7Q9UHF1 273 aa10.22□□□□□ -0.77
NPHP3-211ENST00000515289 METRNQ9UJH8 293 aa10.22□□□□□ -0.77
NPHP3-211ENST00000515289 ZC3H4Q9UPT8 1303 aaKnown RBP10.22□□□□□ -0.77
NPHP3-211ENST00000515289 RIMBP2O15034 1052 aa10.21□□□□□ -0.77
NPHP3-211ENST00000515289 ATP6V1AP38606 617 aa10.21□□□□□ -0.77
NPHP3-211ENST00000515289 LYPD8Q6UX82 237 aa10.21□□□□□ -0.77
NPHP3-211ENST00000515289 ZNF592Q92610 1267 aa10.21□□□□□ -0.77
NPHP3-211ENST00000515289 FKBPLQ9UIM3 349 aa10.21□□□□□ -0.77
NPHP3-211ENST00000515289 SLC4A3P48751 1232 aa10.2□□□□□ -0.78
NPHP3-211ENST00000515289 NCOA4Q13772 614 aa10.2□□□□□ -0.78
NPHP3-211ENST00000515289 PROX2Q3B8N5 592 aa10.2□□□□□ -0.78
NPHP3-211ENST00000515289 DCBLD2Q96PD2 775 aa10.2□□□□□ -0.78
NPHP3-211ENST00000515289 FBXO33Q7Z6M2 555 aa10.19□□□□□ -0.78
NPHP3-211ENST00000515289 RNF135Q8IUD6 432 aa10.19□□□□□ -0.78
NPHP3-211ENST00000515289 SLFNL1Q499Z3 407 aa10.18□□□□□ -0.78
NPHP3-211ENST00000515289 CFHP08603 1231 aa10.17□□□□□ -0.78
NPHP3-211ENST00000515289 HOXB3P14651 431 aaPredicted RBP10.17□□□□□ -0.78
NPHP3-211ENST00000515289 DPYDQ12882 1025 aa10.17□□□□□ -0.78
NPHP3-211ENST00000515289 KIAA1468Q9P260 1216 aa10.17□□□□□ -0.78
NPHP3-211ENST00000515289 RECKO95980 971 aa10.16□□□□□ -0.78
NPHP3-211ENST00000515289 HDGFP51858 240 aaKnown RBP10.16□□□□□ -0.78
NPHP3-211ENST00000515289 MCCD1P59942 119 aaPredicted RBP10.16□□□□□ -0.78
NPHP3-211ENST00000515289 BCL11AQ9H165 835 aa10.16□□□□□ -0.78
NPHP3-211ENST00000515289 CEP126Q9P2H0 1117 aa10.16□□□□□ -0.78
NPHP3-211ENST00000515289 RSF1Q96T23 1441 aaPredicted RBP10.16□□□□□ -0.78
NPHP3-211ENST00000515289 Q3C1V9 767 aa10.15□□□□□ -0.78
NPHP3-211ENST00000515289 PHTF2Q8N3S3 785 aa10.15□□□□□ -0.78
NPHP3-211ENST00000515289 OGFOD1Q8N543 542 aa10.15□□□□□ -0.78
NPHP3-211ENST00000515289 PLPP7Q8NBV4 271 aa10.15□□□□□ -0.78
NPHP3-211ENST00000515289 UBXN4Q92575 508 aa10.15□□□□□ -0.78
NPHP3-211ENST00000515289 SCNN1AP37088 669 aa10.14□□□□□ -0.79
NPHP3-211ENST00000515289 COL19A1Q14993 1142 aa10.14□□□□□ -0.79
NPHP3-211ENST00000515289 SF3A1Q15459 793 aaKnown RBP10.14□□□□□ -0.79
NPHP3-211ENST00000515289 MAP7D1Q3KQU3 841 aa10.14□□□□□ -0.79
NPHP3-211ENST00000515289 TAS1R3Q7RTX0 852 aa10.14□□□□□ -0.79
NPHP3-211ENST00000515289 TRIM50Q86XT4 487 aa10.14□□□□□ -0.79
NPHP3-211ENST00000515289 CHIC2Q9UKJ5 165 aa10.14□□□□□ -0.79
NPHP3-211ENST00000515289 UNC13AQ9UPW8 1703 aa10.13□□□□□ -0.79
NPHP3-211ENST00000515289 CECR2Q9BXF3 1484 aa10.13□□□□□ -0.79
NPHP3-211ENST00000515289 H3BRB1 525 aa10.13□□□□□ -0.79
NPHP3-211ENST00000515289 ICMTO60725 284 aa10.13□□□□□ -0.79
NPHP3-211ENST00000515289 ATP1A2P50993 1020 aa10.13□□□□□ -0.79
NPHP3-211ENST00000515289 EML3Q32P44 896 aa10.13□□□□□ -0.79
NPHP3-211ENST00000515289 SPATA32Q96LK8 384 aa10.13□□□□□ -0.79
NPHP3-211ENST00000515289 ASB16Q96NS5 453 aa10.13□□□□□ -0.79
NPHP3-211ENST00000515289 TUT1Q9H6E5 874 aaKnown RBP10.13□□□□□ -0.79
NPHP3-211ENST00000515289 GPSM3Q9Y4H4 160 aa10.13□□□□□ -0.79
NPHP3-211ENST00000515289 GABBR2O75899 941 aa10.12□□□□□ -0.79
NPHP3-211ENST00000515289 F12P00748 615 aaPredicted RBP10.12□□□□□ -0.79
NPHP3-211ENST00000515289 NAALADL2Q58DX5 795 aa10.12□□□□□ -0.79
NPHP3-211ENST00000515289 DNAAF2Q9NVR5 837 aaKnown RBP10.12□□□□□ -0.79
NPHP3-211ENST00000515289 CXXC1Q9P0U4 656 aaPredicted RBP10.12□□□□□ -0.79
NPHP3-211ENST00000515289 ABL1P00519 1130 aa10.11□□□□□ -0.79
NPHP3-211ENST00000515289 CLDN10P78369 228 aa10.11□□□□□ -0.79
NPHP3-211ENST00000515289 MORN1Q5T089 497 aa10.11□□□□□ -0.79
NPHP3-211ENST00000515289 LARGE2Q8N3Y3 721 aa10.11□□□□□ -0.79
NPHP3-211ENST00000515289 DCTN4Q9UJW0 460 aa10.11□□□□□ -0.79
NPHP3-211ENST00000515289 BICRAQ9NZM4 1560 aa10.1□□□□□ -0.79
NPHP3-211ENST00000515289 MAPK1P28482 360 aa10.1□□□□□ -0.79
NPHP3-211ENST00000515289 KCNH2Q12809 1159 aa10.1□□□□□ -0.79
NPHP3-211ENST00000515289 OCLNQ16625 522 aa10.1□□□□□ -0.79
NPHP3-211ENST00000515289 GLYCTKQ8IVS8 523 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms