RNA–Protein interactions for RNA: ENST00000515127.1

AC004053.1-201, humanhuman

TSL 5 BASIC

Gene AC004053.1, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004053.1-201ENST00000515127 RETREG3Q86VR2 466 aa7.25□□□□□ -1.25
AC004053.1-201ENST00000515127 NPAS3Q8IXF0 933 aa7.25□□□□□ -1.25
AC004053.1-201ENST00000515127 SPIRE2Q8WWL2 714 aa7.25□□□□□ -1.25
AC004053.1-201ENST00000515127 SH3BP2P78314 561 aa7.24□□□□□ -1.25
AC004053.1-201ENST00000515127 SH3D19Q5HYK7 790 aa7.24□□□□□ -1.25
AC004053.1-201ENST00000515127 MYSM1Q5VVJ2 828 aa7.24□□□□□ -1.25
AC004053.1-201ENST00000515127 ZFP42Q96MM3 310 aa7.24□□□□□ -1.25
AC004053.1-201ENST00000515127 DIXDC1Q155Q3 683 aa7.23□□□□□ -1.25
AC004053.1-201ENST00000515127 TBC1D2Q9BYX2 928 aa7.23□□□□□ -1.25
AC004053.1-201ENST00000515127 H3BM21 787 aa7.22□□□□□ -1.25
AC004053.1-201ENST00000515127 FDX1P10109 184 aa7.22□□□□□ -1.25
AC004053.1-201ENST00000515127 GJA5P36382 358 aa7.22□□□□□ -1.25
AC004053.1-201ENST00000515127 SCARF1Q14162 830 aa7.22□□□□□ -1.25
AC004053.1-201ENST00000515127 LINC01559Q495D7 138 aa7.22□□□□□ -1.25
AC004053.1-201ENST00000515127 BAP1Q92560 729 aa7.22□□□□□ -1.25
AC004053.1-201ENST00000515127 RSPH6AQ9H0K4 717 aa7.22□□□□□ -1.25
AC004053.1-201ENST00000515127 CCNYL3P0C7X3 344 aa7.21□□□□□ -1.26
AC004053.1-201ENST00000515127 SKIV2LQ15477 1246 aaKnown RBP7.21□□□□□ -1.26
AC004053.1-201ENST00000515127 TUSC1Q2TAM9 212 aa7.21□□□□□ -1.26
AC004053.1-201ENST00000515127 SPTLC1O15269 473 aa7.2□□□□□ -1.26
AC004053.1-201ENST00000515127 ERBB4Q15303 1308 aa7.2□□□□□ -1.26
AC004053.1-201ENST00000515127 MOXD2PA6NHM9 499 aa7.19□□□□□ -1.26
AC004053.1-201ENST00000515127 RSBN1LQ6PCB5 846 aaPredicted RBP7.19□□□□□ -1.26
AC004053.1-201ENST00000515127 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.19□□□□□ -1.26
AC004053.1-201ENST00000515127 UNC93B1Q9H1C4 597 aa7.19□□□□□ -1.26
AC004053.1-201ENST00000515127 EVA1BQ9NVM1 165 aa7.19□□□□□ -1.26
AC004053.1-201ENST00000515127 LORP23490 312 aaPredicted RBP7.18□□□□□ -1.26
AC004053.1-201ENST00000515127 NNTQ13423 1086 aa7.18□□□□□ -1.26
AC004053.1-201ENST00000515127 MRPL14Q6P1L8 145 aaKnown RBP7.18□□□□□ -1.26
AC004053.1-201ENST00000515127 PURBQ96QR8 312 aaKnown RBP7.18□□□□□ -1.26
AC004053.1-201ENST00000515127 LIMD1Q9UGP4 676 aa7.18□□□□□ -1.26
AC004053.1-201ENST00000515127 PCDHGC3Q9UN70 934 aa7.18□□□□□ -1.26
AC004053.1-201ENST00000515127 TLL2Q9Y6L7 1015 aa7.18□□□□□ -1.26
AC004053.1-201ENST00000515127 VARSP26640 1264 aaKnown RBP7.17□□□□□ -1.26
AC004053.1-201ENST00000515127 CLK2P49760 499 aaKnown RBP7.17□□□□□ -1.26
AC004053.1-201ENST00000515127 WDR4P57081 412 aaKnown RBP7.17□□□□□ -1.26
AC004053.1-201ENST00000515127 KCNH2Q12809 1159 aa7.17□□□□□ -1.26
AC004053.1-201ENST00000515127 RIC3Q7Z5B4 369 aa7.17□□□□□ -1.26
AC004053.1-201ENST00000515127 SOBPA7XYQ1 873 aa7.16□□□□□ -1.26
AC004053.1-201ENST00000515127 NDUFV2P19404 249 aa7.16□□□□□ -1.26
AC004053.1-201ENST00000515127 ARID5BQ14865 1188 aa7.16□□□□□ -1.26
AC004053.1-201ENST00000515127 PTPRNQ16849 979 aa7.16□□□□□ -1.26
AC004053.1-201ENST00000515127 PROCA1Q8NCQ7 364 aaPredicted RBP7.16□□□□□ -1.26
AC004053.1-201ENST00000515127 PRR7Q8TB68 274 aa7.16□□□□□ -1.26
AC004053.1-201ENST00000515127 CTHP32929 405 aa7.15□□□□□ -1.26
AC004053.1-201ENST00000515127 FBXO31Q5XUX0 539 aaPredicted RBP7.15□□□□□ -1.26
AC004053.1-201ENST00000515127 ZNF511Q8NB15 262 aa7.15□□□□□ -1.26
AC004053.1-201ENST00000515127 POLR3EQ9NVU0 708 aa7.15□□□□□ -1.26
AC004053.1-201ENST00000515127 PRPF38BQ5VTL8 546 aaKnown RBP7.14□□□□□ -1.27
AC004053.1-201ENST00000515127 PPP2R2DQ66LE6 453 aa7.14□□□□□ -1.27
AC004053.1-201ENST00000515127 PCMTD1Q96MG8 357 aaPredicted RBP7.14□□□□□ -1.27
AC004053.1-201ENST00000515127 PCDHB15Q9Y5E8 787 aa7.14□□□□□ -1.27
AC004053.1-201ENST00000515127 MAN1A2O60476 641 aa7.13□□□□□ -1.27
AC004053.1-201ENST00000515127 LILRB3O75022 631 aa7.13□□□□□ -1.27
AC004053.1-201ENST00000515127 ADH1CP00326 375 aa7.13□□□□□ -1.27
AC004053.1-201ENST00000515127 TIMP2P16035 220 aa7.13□□□□□ -1.27
AC004053.1-201ENST00000515127 FAM174AQ8TBP5 190 aa7.13□□□□□ -1.27
AC004053.1-201ENST00000515127 C6orf118Q5T5N4 469 aa7.12□□□□□ -1.27
AC004053.1-201ENST00000515127 MPNDQ8N594 471 aa7.12□□□□□ -1.27
AC004053.1-201ENST00000515127 MTMR2Q13614 643 aa7.11□□□□□ -1.27
AC004053.1-201ENST00000515127 AGERQ15109 404 aa7.11□□□□□ -1.27
AC004053.1-201ENST00000515127 QPCTQ16769 361 aa7.11□□□□□ -1.27
AC004053.1-201ENST00000515127 SPDYE5A6NIY4 337 aa7.1□□□□□ -1.27
AC004053.1-201ENST00000515127 UPP2O95045 317 aa7.1□□□□□ -1.27
AC004053.1-201ENST00000515127 ZIC2O95409 532 aaPredicted RBP7.1□□□□□ -1.27
AC004053.1-201ENST00000515127 HRCP23327 699 aa7.1□□□□□ -1.27
AC004053.1-201ENST00000515127 BMP2P12643 396 aa7.09□□□□□ -1.27
AC004053.1-201ENST00000515127 CABLES1Q8TDN4 633 aa7.09□□□□□ -1.27
AC004053.1-201ENST00000515127 ZBTB3Q9H5J0 574 aa7.09□□□□□ -1.27
AC004053.1-201ENST00000515127 ZFAND3Q9H8U3 227 aa7.09□□□□□ -1.27
AC004053.1-201ENST00000515127 RFC5P40937 340 aa7.08□□□□□ -1.28
AC004053.1-201ENST00000515127 SUZ12Q15022 739 aaKnown RBP7.08□□□□□ -1.28
AC004053.1-201ENST00000515127 RTL5Q5HYW3 569 aaPredicted RBP7.08□□□□□ -1.28
AC004053.1-201ENST00000515127 DESI1Q6ICB0 168 aa7.08□□□□□ -1.28
AC004053.1-201ENST00000515127 KCTD17Q8N5Z5 321 aa7.08□□□□□ -1.28
AC004053.1-201ENST00000515127 FOXJ1Q92949 421 aa7.08□□□□□ -1.28
AC004053.1-201ENST00000515127 GTF3C3Q9Y5Q9 886 aa7.08□□□□□ -1.28
AC004053.1-201ENST00000515127 LOC100996750A0A140TA64 210 aa7.07□□□□□ -1.28
AC004053.1-201ENST00000515127 PPFIA3O75145 1194 aa7.07□□□□□ -1.28
AC004053.1-201ENST00000515127 ITPKCQ96DU7 683 aa7.07□□□□□ -1.28
AC004053.1-201ENST00000515127 KLF16Q9BXK1 252 aaPredicted RBP7.07□□□□□ -1.28
AC004053.1-201ENST00000515127 KRTAP4-6Q9BYQ5 205 aa7.07□□□□□ -1.28
AC004053.1-201ENST00000515127 VSIG8P0DPA2 414 aa7.06□□□□□ -1.28
AC004053.1-201ENST00000515127 NR5A1Q13285 461 aa7.06□□□□□ -1.28
AC004053.1-201ENST00000515127 CSPP1Q1MSJ5 1256 aa7.06□□□□□ -1.28
AC004053.1-201ENST00000515127 LYPD8Q6UX82 237 aa7.06□□□□□ -1.28
AC004053.1-201ENST00000515127 CDK15Q96Q40 435 aa7.06□□□□□ -1.28
AC004053.1-201ENST00000515127 CFAP99D6REC4 459 aa7.05□□□□□ -1.28
AC004053.1-201ENST00000515127 KCNMA1Q12791 1236 aa7.05□□□□□ -1.28
AC004053.1-201ENST00000515127 TMEM151AQ8N4L1 468 aa7.04□□□□□ -1.28
AC004053.1-201ENST00000515127 BANK1Q8NDB2 785 aa7.04□□□□□ -1.28
AC004053.1-201ENST00000515127 SOCS7O14512 581 aa7.03□□□□□ -1.28
AC004053.1-201ENST00000515127 TMEM259Q4ZIN3 620 aa7.03□□□□□ -1.28
AC004053.1-201ENST00000515127 BPHLQ86WA6 291 aaPredicted RBP7.03□□□□□ -1.28
AC004053.1-201ENST00000515127 TSC1Q92574 1164 aa7.03□□□□□ -1.28
AC004053.1-201ENST00000515127 MAP10Q9P2G4 905 aa7.03□□□□□ -1.28
AC004053.1-201ENST00000515127 NUTM2BA6NNL0 878 aaPredicted RBP7.02□□□□□ -1.29
AC004053.1-201ENST00000515127 NUTM2EB1AL46 878 aaPredicted RBP7.02□□□□□ -1.29
AC004053.1-201ENST00000515127 GDF11O95390 407 aa7.02□□□□□ -1.29
AC004053.1-201ENST00000515127 NR3C2P08235 984 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms