RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 SIN3AQ96ST3 1273 aa19.26■□□□□ 0.67
PFDN1-206ENST00000514611 COL14A1Q05707 1796 aaKnown RBP19.25■□□□□ 0.67
PFDN1-206ENST00000514611 POLR3AO14802 1390 aaPredicted RBP19.25■□□□□ 0.67
PFDN1-206ENST00000514611 L3MBTL2Q969R5 705 aa19.25■□□□□ 0.67
PFDN1-206ENST00000514611 SEPT12Q8IYM1 358 aa19.24■□□□□ 0.67
PFDN1-206ENST00000514611 BTG4Q9NY30 223 aa19.24■□□□□ 0.67
PFDN1-206ENST00000514611 ACEP12821 1306 aa19.24■□□□□ 0.67
PFDN1-206ENST00000514611 CENPJQ9HC77 1338 aaPredicted RBP19.24■□□□□ 0.67
PFDN1-206ENST00000514611 PHRF1Q9P1Y6 1649 aaKnown RBP19.23■□□□□ 0.67
PFDN1-206ENST00000514611 BRWD3Q6RI45 1802 aa19.23■□□□□ 0.67
PFDN1-206ENST00000514611 QRICH2Q9H0J4 1663 aa19.22■□□□□ 0.67
PFDN1-206ENST00000514611 CCDC61Q9Y6R9 512 aa19.22■□□□□ 0.67
PFDN1-206ENST00000514611 NUTM2GQ5VZR2 741 aa19.21■□□□□ 0.67
PFDN1-206ENST00000514611 PPIP5K1Q6PFW1 1433 aa19.2■□□□□ 0.66
PFDN1-206ENST00000514611 SRPK2P78362 688 aaKnown RBP19.2■□□□□ 0.66
PFDN1-206ENST00000514611 NBPF8Q3BBV2 869 aa19.2■□□□□ 0.66
PFDN1-206ENST00000514611 PRDM11Q9NQV5 511 aa19.2■□□□□ 0.66
PFDN1-206ENST00000514611 TRPM1Q7Z4N2 1603 aa19.2■□□□□ 0.66
PFDN1-206ENST00000514611 KIAA0232Q92628 1395 aa19.19■□□□□ 0.66
PFDN1-206ENST00000514611 PLEKHG3A1L390 1219 aa19.19■□□□□ 0.66
PFDN1-206ENST00000514611 ONECUT3O60422 494 aaPredicted RBP19.19■□□□□ 0.66
PFDN1-206ENST00000514611 NEUROD1Q13562 356 aa19.19■□□□□ 0.66
PFDN1-206ENST00000514611 CABP2Q9NPB3 220 aa19.19■□□□□ 0.66
PFDN1-206ENST00000514611 BLMP54132 1417 aaPredicted RBP19.18■□□□□ 0.66
PFDN1-206ENST00000514611 SRCAPQ6ZRS2 3230 aa19.18■□□□□ 0.66
PFDN1-206ENST00000514611 A0A0G2JS52 829 aa19.18■□□□□ 0.66
PFDN1-206ENST00000514611 MYT1Q01538 1121 aa19.18■□□□□ 0.66
PFDN1-206ENST00000514611 FAM98CQ17RN3 349 aaKnown RBP19.18■□□□□ 0.66
PFDN1-206ENST00000514611 NRKQ7Z2Y5 1582 aa19.18■□□□□ 0.66
PFDN1-206ENST00000514611 CHRNA2Q15822 529 aa19.17■□□□□ 0.66
PFDN1-206ENST00000514611 CCDC125Q86Z20 511 aa19.17■□□□□ 0.66
PFDN1-206ENST00000514611 KRT27Q7Z3Y8 459 aa19.16■□□□□ 0.66
PFDN1-206ENST00000514611 ROCK2O75116 1388 aaKnown RBP19.16■□□□□ 0.66
PFDN1-206ENST00000514611 ZC3H6P61129 1189 aaKnown RBP19.15■□□□□ 0.66
PFDN1-206ENST00000514611 SPATA31A5Q5VU36 1347 aa19.15■□□□□ 0.66
PFDN1-206ENST00000514611 SPATA31A7Q8IWB4 1347 aa19.15■□□□□ 0.66
PFDN1-206ENST00000514611 ABTB2Q8N961 1025 aa19.14■□□□□ 0.65
PFDN1-206ENST00000514611 DEFB132Q7Z7B7 95 aa19.13■□□□□ 0.65
PFDN1-206ENST00000514611 THSD7AQ9UPZ6 1657 aa19.13■□□□□ 0.65
PFDN1-206ENST00000514611 USP19O94966 1318 aa19.12■□□□□ 0.65
PFDN1-206ENST00000514611 STRN4Q9NRL3 753 aa19.12■□□□□ 0.65
PFDN1-206ENST00000514611 CABP1Q9NZU7 370 aa19.11■□□□□ 0.65
PFDN1-206ENST00000514611 USP6P35125 1406 aa19.1■□□□□ 0.65
PFDN1-206ENST00000514611 ZRANB1Q9UGI0 708 aa19.1■□□□□ 0.65
PFDN1-206ENST00000514611 SPATA31A1Q5TZJ5 1347 aa19.09■□□□□ 0.65
PFDN1-206ENST00000514611 EVC2Q86UK5 1308 aa19.09■□□□□ 0.65
PFDN1-206ENST00000514611 LMO7Q8WWI1 1683 aa19.09■□□□□ 0.65
PFDN1-206ENST00000514611 FAM182BQ5T319 152 aa19.09■□□□□ 0.65
PFDN1-206ENST00000514611 SSH2Q76I76 1423 aa19.08■□□□□ 0.65
PFDN1-206ENST00000514611 CPDO75976 1380 aa19.08■□□□□ 0.65
PFDN1-206ENST00000514611 SF3B2Q13435 895 aaKnown RBP19.08■□□□□ 0.64
PFDN1-206ENST00000514611 CAMTA1Q9Y6Y1 1673 aa19.08■□□□□ 0.64
PFDN1-206ENST00000514611 NLRP13Q86W25 1043 aa19.06■□□□□ 0.64
PFDN1-206ENST00000514611 USP35Q9P2H5 1018 aa19.06■□□□□ 0.64
PFDN1-206ENST00000514611 BRD4O60885 1362 aaPredicted RBP19.06■□□□□ 0.64
PFDN1-206ENST00000514611 PIK3C2AO00443 1686 aa19.05■□□□□ 0.64
PFDN1-206ENST00000514611 GCP02774 474 aa19.05■□□□□ 0.64
PFDN1-206ENST00000514611 SLIT3O75094 1523 aa19.05■□□□□ 0.64
PFDN1-206ENST00000514611 LARP1Q6PKG0 1096 aaKnown RBP19.04■□□□□ 0.64
PFDN1-206ENST00000514611 COL5A2P05997 1499 aaPredicted RBP19.03■□□□□ 0.64
PFDN1-206ENST00000514611 EVA1CP58658 441 aa19.03■□□□□ 0.64
PFDN1-206ENST00000514611 NLRP6P59044 892 aa19.02■□□□□ 0.64
PFDN1-206ENST00000514611 ZBTB7CA1YPR0 619 aa19.01■□□□□ 0.63
PFDN1-206ENST00000514611 BAG6P46379 1132 aa19.01■□□□□ 0.63
PFDN1-206ENST00000514611 TONSLQ96HA7 1378 aa19.01■□□□□ 0.63
PFDN1-206ENST00000514611 RGPD1P0DJD0 1748 aa19■□□□□ 0.63
PFDN1-206ENST00000514611 CARD11Q9BXL7 1154 aa19■□□□□ 0.63
PFDN1-206ENST00000514611 TNS1Q9HBL0 1735 aaKnown RBP19■□□□□ 0.63
PFDN1-206ENST00000514611 AKAP12Q02952 1782 aa18.99■□□□□ 0.63
PFDN1-206ENST00000514611 SBNO2Q9Y2G9 1366 aa18.99■□□□□ 0.63
PFDN1-206ENST00000514611 BARGINQ6ZT62 677 aa18.99■□□□□ 0.63
PFDN1-206ENST00000514611 TTC21BQ7Z4L5 1316 aa18.99■□□□□ 0.63
PFDN1-206ENST00000514611 CPSF1Q10570 1443 aaKnown RBP18.98■□□□□ 0.63
PFDN1-206ENST00000514611 EN1Q05925 392 aaPredicted RBP18.97■□□□□ 0.63
PFDN1-206ENST00000514611 TCP11L2Q8N4U5 519 aa18.97■□□□□ 0.63
PFDN1-206ENST00000514611 AATKQ6ZMQ8 1374 aa18.96■□□□□ 0.63
PFDN1-206ENST00000514611 DISP2A7MBM2 1401 aa18.96■□□□□ 0.63
PFDN1-206ENST00000514611 CRB1P82279 1406 aa18.95■□□□□ 0.62
PFDN1-206ENST00000514611 SOX12O15370 315 aa18.95■□□□□ 0.62
PFDN1-206ENST00000514611 ZNF692Q9BU19 519 aaPredicted RBP18.95■□□□□ 0.62
PFDN1-206ENST00000514611 KTN1Q86UP2 1357 aaKnown RBP18.94■□□□□ 0.62
PFDN1-206ENST00000514611 TRIM37O94972 964 aa18.94■□□□□ 0.62
PFDN1-206ENST00000514611 CD163L1Q9NR16 1453 aa18.94■□□□□ 0.62
PFDN1-206ENST00000514611 TTC21AQ8NDW8 1320 aa18.94■□□□□ 0.62
PFDN1-206ENST00000514611 MON2Q7Z3U7 1717 aa18.94■□□□□ 0.62
PFDN1-206ENST00000514611 COL18A1P39060 1754 aa18.93■□□□□ 0.62
PFDN1-206ENST00000514611 PDE3BQ13370 1112 aa18.93■□□□□ 0.62
PFDN1-206ENST00000514611 FAM196AQ6ZSG2 479 aa18.93■□□□□ 0.62
PFDN1-206ENST00000514611 THRAP3Q9Y2W1 955 aaKnown RBP18.93■□□□□ 0.62
PFDN1-206ENST00000514611 NFAT5O94916 1531 aa18.93■□□□□ 0.62
PFDN1-206ENST00000514611 PARP4Q9UKK3 1724 aaKnown RBP18.92■□□□□ 0.62
PFDN1-206ENST00000514611 PSDA5PKW4 1024 aaPredicted RBP18.92■□□□□ 0.62
PFDN1-206ENST00000514611 AXIN2Q9Y2T1 843 aa18.92■□□□□ 0.62
PFDN1-206ENST00000514611 TRIM26Q12899 539 aaPredicted RBP18.91■□□□□ 0.62
PFDN1-206ENST00000514611 EZH2Q15910 746 aaKnown RBP18.91■□□□□ 0.62
PFDN1-206ENST00000514611 ARHGEF25Q86VW2 580 aa18.91■□□□□ 0.62
PFDN1-206ENST00000514611 LRRC37A3O60309 1634 aa18.9■□□□□ 0.62
PFDN1-206ENST00000514611 TOM1L2Q6ZVM7 507 aa18.89■□□□□ 0.61
PFDN1-206ENST00000514611 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.89■□□□□ 0.611e-6■■□□□ 12
PFDN1-206ENST00000514611 KCNH5Q8NCM2 988 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms