RNA–Protein interactions for RNA: ENST00000512336.5

DDR1-267, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-267ENST00000512336 CAMKK2Q96RR4 588 aa18.26■□□□□ 0.51
DDR1-267ENST00000512336 TRIM37O94972 964 aa18.25■□□□□ 0.51
DDR1-267ENST00000512336 YY1P25490 414 aa18.24■□□□□ 0.51
DDR1-267ENST00000512336 POGKQ9P215 609 aa18.24■□□□□ 0.51
DDR1-267ENST00000512336 GPRASP1Q5JY77 1395 aa18.24■□□□□ 0.51
DDR1-267ENST00000512336 ACIN1Q9UKV3 1341 aaKnown RBP18.23■□□□□ 0.51
DDR1-267ENST00000512336 MPHOSPH9Q99550 1183 aa18.23■□□□□ 0.51
DDR1-267ENST00000512336 DLC1Q96QB1 1528 aa18.23■□□□□ 0.51
DDR1-267ENST00000512336 HIRIP3Q9BW71 556 aaPredicted RBP18.22■□□□□ 0.51
DDR1-267ENST00000512336 PRDM11Q9NQV5 511 aa18.22■□□□□ 0.51
DDR1-267ENST00000512336 CRYBG1Q9Y4K1 1723 aa18.22■□□□□ 0.51
DDR1-267ENST00000512336 PRR36Q9H6K5 1346 aa18.22■□□□□ 0.51
DDR1-267ENST00000512336 APBA3O96018 575 aa18.21■□□□□ 0.51
DDR1-267ENST00000512336 FAM196AQ6ZSG2 479 aa18.21■□□□□ 0.51
DDR1-267ENST00000512336 SPATA31A1Q5TZJ5 1347 aa18.21■□□□□ 0.51
DDR1-267ENST00000512336 PARD3Q8TEW0 1356 aa18.2■□□□□ 0.5
DDR1-267ENST00000512336 PAK3O75914 559 aaPredicted RBP18.19■□□□□ 0.5
DDR1-267ENST00000512336 KIAA0232Q92628 1395 aa18.18■□□□□ 0.5
DDR1-267ENST00000512336 CHRNA2Q15822 529 aa18.18■□□□□ 0.5
DDR1-267ENST00000512336 STRN4Q9NRL3 753 aa18.18■□□□□ 0.5
DDR1-267ENST00000512336 MINK1Q8N4C8 1332 aaPredicted RBP18.18■□□□□ 0.5
DDR1-267ENST00000512336 TULP4Q9NRJ4 1543 aa18.18■□□□□ 0.5
DDR1-267ENST00000512336 NGDNQ8NEJ9 315 aaKnown RBP18.17■□□□□ 0.5
DDR1-267ENST00000512336 RREB1Q92766 1687 aa18.17■□□□□ 0.5
DDR1-267ENST00000512336 EIF3AQ14152 1382 aaKnown RBP18.17■□□□□ 0.5
DDR1-267ENST00000512336 NUP188Q5SRE5 1749 aa18.16■□□□□ 0.5
DDR1-267ENST00000512336 TRAK1Q9UPV9 953 aa18.16■□□□□ 0.5
DDR1-267ENST00000512336 ADGRB1O14514 1584 aa18.16■□□□□ 0.5
DDR1-267ENST00000512336 USP35Q9P2H5 1018 aa18.15■□□□□ 0.5
DDR1-267ENST00000512336 WASLO00401 505 aaPredicted RBP18.14■□□□□ 0.49
DDR1-267ENST00000512336 PHRF1Q9P1Y6 1649 aaKnown RBP18.13■□□□□ 0.49
DDR1-267ENST00000512336 ZC3H6P61129 1189 aaKnown RBP18.13■□□□□ 0.49
DDR1-267ENST00000512336 NBPF8Q3BBV2 869 aa18.13■□□□□ 0.49
DDR1-267ENST00000512336 NBPF14Q5TI25 921 aa18.13■□□□□ 0.49
DDR1-267ENST00000512336 PPP1R1BQ9UD71 204 aaPredicted RBP18.13■□□□□ 0.49
DDR1-267ENST00000512336 PDE3BQ13370 1112 aa18.12■□□□□ 0.49
DDR1-267ENST00000512336 SPON1Q9HCB6 807 aa18.11■□□□□ 0.49
DDR1-267ENST00000512336 SSH2Q76I76 1423 aa18.1■□□□□ 0.49
DDR1-267ENST00000512336 NUTM2GQ5VZR2 741 aa18.1■□□□□ 0.49
DDR1-267ENST00000512336 BARGINQ6ZT62 677 aa18.1■□□□□ 0.49
DDR1-267ENST00000512336 EVA1CP58658 441 aa18.09■□□□□ 0.49
DDR1-267ENST00000512336 ATP7BP35670 1465 aa18.08■□□□□ 0.49
DDR1-267ENST00000512336 NINLQ9Y2I6 1382 aa18.08■□□□□ 0.49
DDR1-267ENST00000512336 KCNQ2O43526 872 aa18.08■□□□□ 0.48
DDR1-267ENST00000512336 DCAF8L1A6NGE4 600 aa18.07■□□□□ 0.48
DDR1-267ENST00000512336 LARP1Q6PKG0 1096 aaKnown RBP18.07■□□□□ 0.48
DDR1-267ENST00000512336 TCP11L2Q8N4U5 519 aa18.06■□□□□ 0.48
DDR1-267ENST00000512336 NUDT16Q96DE0 195 aaKnown RBP18.06■□□□□ 0.48
DDR1-267ENST00000512336 ITSN1Q15811 1721 aa18.06■□□□□ 0.48
DDR1-267ENST00000512336 CAMTA1Q9Y6Y1 1673 aa18.06■□□□□ 0.48
DDR1-267ENST00000512336 NRKQ7Z2Y5 1582 aa18.04■□□□□ 0.48
DDR1-267ENST00000512336 LMO7Q8WWI1 1683 aa18.03■□□□□ 0.48
DDR1-267ENST00000512336 KDM2AQ9Y2K7 1162 aa18.02■□□□□ 0.48
DDR1-267ENST00000512336 UTRNP46939 3433 aa18.01■□□□□ 0.47
DDR1-267ENST00000512336 THRAP3Q9Y2W1 955 aaKnown RBP18.01■□□□□ 0.47
DDR1-267ENST00000512336 POLR3AO14802 1390 aaPredicted RBP18.01■□□□□ 0.47
DDR1-267ENST00000512336 CPDO75976 1380 aa18.01■□□□□ 0.47
DDR1-267ENST00000512336 ACEP12821 1306 aa18■□□□□ 0.47
DDR1-267ENST00000512336 ANO8Q9HCE9 1232 aaPredicted RBP18■□□□□ 0.47
DDR1-267ENST00000512336 ARHGEF28Q8N1W1 1705 aaKnown RBP18■□□□□ 0.47
DDR1-267ENST00000512336 PARP4Q9UKK3 1724 aaKnown RBP18■□□□□ 0.47
DDR1-267ENST00000512336 USP19O94966 1318 aa17.98■□□□□ 0.47
DDR1-267ENST00000512336 OVOS2A0A0G2JMS6 1433 aa17.98■□□□□ 0.47
DDR1-267ENST00000512336 OVOS2A0A0J9YW53 1432 aa17.98■□□□□ 0.47
DDR1-267ENST00000512336 OVOS2Q6IE36 1432 aa17.98■□□□□ 0.47
DDR1-267ENST00000512336 ABTB2Q8N961 1025 aa17.98■□□□□ 0.47
DDR1-267ENST00000512336 DCAF11Q8TEB1 546 aa17.98■□□□□ 0.47
DDR1-267ENST00000512336 CDK19Q9BWU1 502 aa17.98■□□□□ 0.47
DDR1-267ENST00000512336 COL5A2P05997 1499 aaPredicted RBP17.98■□□□□ 0.47
DDR1-267ENST00000512336 TOPAZ1Q8N9V7 1692 aa17.98■□□□□ 0.47
DDR1-267ENST00000512336 PEAK1Q9H792 1746 aa17.98■□□□□ 0.47
DDR1-267ENST00000512336 CASZ1Q86V15 1759 aa17.97■□□□□ 0.47
DDR1-267ENST00000512336 PDGFDQ9GZP0 370 aaPredicted RBP17.97■□□□□ 0.47
DDR1-267ENST00000512336 RGPD3A6NKT7 1758 aaPredicted RBP17.96■□□□□ 0.47
DDR1-267ENST00000512336 RGPD4Q7Z3J3 1758 aa17.96■□□□□ 0.47
DDR1-267ENST00000512336 C11orf95C9JLR9 678 aaPredicted RBP17.96■□□□□ 0.47
DDR1-267ENST00000512336 PLSCR1O15162 318 aa17.96■□□□□ 0.47
DDR1-267ENST00000512336 CCDC61Q9Y6R9 512 aa17.96■□□□□ 0.47
DDR1-267ENST00000512336 PLEKHG3A1L390 1219 aa17.95■□□□□ 0.46
DDR1-267ENST00000512336 ZBTB7AO95365 584 aa17.95■□□□□ 0.46
DDR1-267ENST00000512336 ZNF784Q8NCA9 323 aaPredicted RBP17.95■□□□□ 0.46
DDR1-267ENST00000512336 GCP02774 474 aa17.94■□□□□ 0.46
DDR1-267ENST00000512336 PTF1AQ7RTS3 328 aa17.94■□□□□ 0.46
DDR1-267ENST00000512336 CRB1P82279 1406 aa17.94■□□□□ 0.46
DDR1-267ENST00000512336 LRRC37A3O60309 1634 aa17.94■□□□□ 0.46
DDR1-267ENST00000512336 MYOM1P52179 1685 aa17.93■□□□□ 0.46
DDR1-267ENST00000512336 ZBTB7CA1YPR0 619 aa17.92■□□□□ 0.46
DDR1-267ENST00000512336 PTGER2P43116 358 aa17.92■□□□□ 0.46
DDR1-267ENST00000512336 DDB1Q16531 1140 aa17.92■□□□□ 0.46
DDR1-267ENST00000512336 NLRP13Q86W25 1043 aa17.92■□□□□ 0.46
DDR1-267ENST00000512336 BCL11BQ9C0K0 894 aaPredicted RBP17.92■□□□□ 0.46
DDR1-267ENST00000512336 SBF2Q86WG5 1849 aa17.92■□□□□ 0.46
DDR1-267ENST00000512336 PROM2Q8N271 834 aa17.91■□□□□ 0.46
DDR1-267ENST00000512336 ATF5Q9Y2D1 282 aaPredicted RBP17.91■□□□□ 0.46
DDR1-267ENST00000512336 STAC3Q96MF2 364 aa17.89■□□□□ 0.45
DDR1-267ENST00000512336 RAB3GAP2Q9H2M9 1393 aa17.89■□□□□ 0.45
DDR1-267ENST00000512336 SENP3-EIF4A1A0A087X0R7 540 aa17.88■□□□□ 0.45
DDR1-267ENST00000512336 PPIP5K1Q6PFW1 1433 aa17.88■□□□□ 0.45
DDR1-267ENST00000512336 TOM1L2Q6ZVM7 507 aa17.87■□□□□ 0.45
DDR1-267ENST00000512336 MARCH10Q8NA82 808 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms