RNA–Protein interactions for RNA: ENST00000511896.5

APBB3-219, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 2

Gene APBB3, Length 2,032 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-219ENST00000511896 COL3A1P02461 1466 aaPredicted RBP25.24■■□□□ 1.63
APBB3-219ENST00000511896 RUNDC1Q96C34 613 aa25.24■■□□□ 1.63
APBB3-219ENST00000511896 PNPLA6Q8IY17 1366 aa25.23■■□□□ 1.63
APBB3-219ENST00000511896 ACEP12821 1306 aa25.23■■□□□ 1.63
APBB3-219ENST00000511896 U2AF1L5P0DN76 240 aaPredicted RBP25.22■■□□□ 1.63
APBB3-219ENST00000511896 U2AF1Q01081 240 aaKnown RBP eCLIP25.22■■□□□ 1.63
APBB3-219ENST00000511896 DUSP27Q5VZP5 1158 aa25.21■■□□□ 1.63
APBB3-219ENST00000511896 NKTRP30414 1462 aaKnown RBP25.2■■□□□ 1.63
APBB3-219ENST00000511896 PELP1Q8IZL8 1130 aaKnown RBP25.2■■□□□ 1.63
APBB3-219ENST00000511896 POLKQ9UBT6 870 aa25.2■■□□□ 1.63
APBB3-219ENST00000511896 ZRANB1Q9UGI0 708 aa25.2■■□□□ 1.63
APBB3-219ENST00000511896 CHD2O14647 1828 aaKnown RBP25.19■■□□□ 1.62
APBB3-219ENST00000511896 FBLN1P23142 703 aa25.19■■□□□ 1.62
APBB3-219ENST00000511896 SLFN5Q08AF3 891 aa25.19■■□□□ 1.62
APBB3-219ENST00000511896 PPP4R2Q9NY27 417 aa25.19■■□□□ 1.62
APBB3-219ENST00000511896 TCP11L2Q8N4U5 519 aa25.19■■□□□ 1.62
APBB3-219ENST00000511896 COG3Q96JB2 828 aa25.18■■□□□ 1.62
APBB3-219ENST00000511896 IQSEC2Q5JU85 1478 aa25.18■■□□□ 1.62
APBB3-219ENST00000511896 TRMT2AQ8IZ69 625 aaKnown RBP25.17■■□□□ 1.62
APBB3-219ENST00000511896 TTC21BQ7Z4L5 1316 aa25.17■■□□□ 1.62
APBB3-219ENST00000511896 RRP1P56182 461 aaKnown RBP25.17■■□□□ 1.62
APBB3-219ENST00000511896 MAP2P11137 1827 aaKnown RBP25.17■■□□□ 1.62
APBB3-219ENST00000511896 USP6P35125 1406 aa25.17■■□□□ 1.62
APBB3-219ENST00000511896 DIAPH1O60610 1272 aaKnown RBP25.16■■□□□ 1.62
APBB3-219ENST00000511896 WWC1Q8IX03 1113 aa25.16■■□□□ 1.62
APBB3-219ENST00000511896 NPHP4O75161 1426 aaPredicted RBP25.16■■□□□ 1.62
APBB3-219ENST00000511896 AATKQ6ZMQ8 1374 aa25.16■■□□□ 1.62
APBB3-219ENST00000511896 U2SURPO15042 1029 aaKnown RBP25.15■■□□□ 1.62
APBB3-219ENST00000511896 NRKQ7Z2Y5 1582 aa25.15■■□□□ 1.62
APBB3-219ENST00000511896 SPINK5Q9NQ38 1064 aaPredicted RBP25.15■■□□□ 1.62
APBB3-219ENST00000511896 PPM1GO15355 546 aaPredicted RBP25.13■■□□□ 1.61
APBB3-219ENST00000511896 PHF23Q9BUL5 403 aaPredicted RBP25.13■■□□□ 1.61
APBB3-219ENST00000511896 DMRT2Q9Y5R5 561 aa25.13■■□□□ 1.61
APBB3-219ENST00000511896 RGPD8O14715 1765 aaPredicted RBP25.13■■□□□ 1.61
APBB3-219ENST00000511896 E9PSI1 815 aa25.12■■□□□ 1.61
APBB3-219ENST00000511896 NEUROD2Q15784 382 aa25.12■■□□□ 1.61
APBB3-219ENST00000511896 PMFBP1Q8TBY8 1022 aa25.12■■□□□ 1.61
APBB3-219ENST00000511896 RRP7AQ9Y3A4 280 aaKnown RBP25.12■■□□□ 1.61
APBB3-219ENST00000511896 SSH2Q76I76 1423 aa25.12■■□□□ 1.61
APBB3-219ENST00000511896 ANKARQ7Z5J8 1434 aa25.12■■□□□ 1.61
APBB3-219ENST00000511896 EMILIN1Q9Y6C2 1016 aa25.12■■□□□ 1.61
APBB3-219ENST00000511896 NCBP3Q53F19 620 aaKnown RBP25.11■■□□□ 1.61
APBB3-219ENST00000511896 PLEKHF1Q96S99 279 aa25.11■■□□□ 1.61
APBB3-219ENST00000511896 CCDC27Q2M243 656 aa25.1■■□□□ 1.61
APBB3-219ENST00000511896 NGDNQ8NEJ9 315 aaKnown RBP25.08■■□□□ 1.61
APBB3-219ENST00000511896 FMN2Q9NZ56 1722 aa25.08■■□□□ 1.61
APBB3-219ENST00000511896 CDK12Q9NYV4 1490 aaPredicted RBP25.07■■□□□ 1.6
APBB3-219ENST00000511896 OVOS2A0A0J9YW53 1432 aa25.07■■□□□ 1.6
APBB3-219ENST00000511896 OVOS2Q6IE36 1432 aa25.07■■□□□ 1.6
APBB3-219ENST00000511896 NALCNQ8IZF0 1738 aa25.06■■□□□ 1.6
APBB3-219ENST00000511896 RRS1Q15050 365 aaKnown RBP25.06■■□□□ 1.6
APBB3-219ENST00000511896 TTC21AQ8NDW8 1320 aa25.06■■□□□ 1.6
APBB3-219ENST00000511896 RBM33Q96EV2 1170 aaKnown RBP25.05■■□□□ 1.6
APBB3-219ENST00000511896 WDR63Q8IWG1 891 aa25.05■■□□□ 1.6
APBB3-219ENST00000511896 FCHSD2O94868 740 aa25.04■■□□□ 1.6
APBB3-219ENST00000511896 B4GALNT3Q6L9W6 998 aa25.04■■□□□ 1.6
APBB3-219ENST00000511896 PNNQ9H307 717 aaKnown RBP25.04■■□□□ 1.6
APBB3-219ENST00000511896 MAPK8IP3Q9UPT6 1336 aa25.02■■□□□ 1.6
APBB3-219ENST00000511896 IL13P35225 146 aa25.02■■□□□ 1.6
APBB3-219ENST00000511896 ADGRL3Q9HAR2 1447 aa25.02■■□□□ 1.6
APBB3-219ENST00000511896 TMPOP42166 694 aaKnown RBP25.02■■□□□ 1.6
APBB3-219ENST00000511896 USP31Q70CQ4 1352 aa25.01■■□□□ 1.59
APBB3-219ENST00000511896 PLIN1O60240 522 aa25■■□□□ 1.59
APBB3-219ENST00000511896 RSPH6AQ9H0K4 717 aa25■■□□□ 1.59
APBB3-219ENST00000511896 LRRC7Q96NW7 1537 aa24.97■■□□□ 1.59
APBB3-219ENST00000511896 NWD1Q149M9 1564 aa24.97■■□□□ 1.59
APBB3-219ENST00000511896 PRKAR2BP31323 418 aa24.96■■□□□ 1.59
APBB3-219ENST00000511896 EXOC6Q8TAG9 804 aa24.96■■□□□ 1.59
APBB3-219ENST00000511896 PHF8Q9UPP1 1060 aa24.96■■□□□ 1.59
APBB3-219ENST00000511896 TRIM35Q9UPQ4 493 aa24.96■■□□□ 1.59
APBB3-219ENST00000511896 HMOX1P09601 288 aa24.95■■□□□ 1.58
APBB3-219ENST00000511896 RIPK4P57078 832 aa24.93■■□□□ 1.58
APBB3-219ENST00000511896 C14orf37Q86TY3 774 aa24.93■■□□□ 1.58
APBB3-219ENST00000511896 CCDC136Q96JN2 1154 aa24.93■■□□□ 1.58
APBB3-219ENST00000511896 PIK3C2AO00443 1686 aa24.93■■□□□ 1.58
APBB3-219ENST00000511896 NEFMP07197 916 aa24.91■■□□□ 1.58
APBB3-219ENST00000511896 SOX12O15370 315 aa24.91■■□□□ 1.58
APBB3-219ENST00000511896 MYH16Q9H6N6 1097 aa24.91■■□□□ 1.58
APBB3-219ENST00000511896 NLRP6P59044 892 aa24.9■■□□□ 1.58
APBB3-219ENST00000511896 PROSER2Q86WR7 435 aaPredicted RBP24.9■■□□□ 1.58
APBB3-219ENST00000511896 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.9■■□□□ 1.58
APBB3-219ENST00000511896 PHACTR3Q96KR7 559 aa24.9■■□□□ 1.58
APBB3-219ENST00000511896 EIF4A2Q14240 407 aaKnown RBP24.9■■□□□ 1.58
APBB3-219ENST00000511896 HSP90AB2PQ58FF8 381 aa24.89■■□□□ 1.57
APBB3-219ENST00000511896 ESCO1Q5FWF5 840 aa24.89■■□□□ 1.57
APBB3-219ENST00000511896 C20orf194Q5TEA3 1177 aa24.89■■□□□ 1.57
APBB3-219ENST00000511896 MAP3K19Q56UN5 1328 aa24.89■■□□□ 1.57
APBB3-219ENST00000511896 PEAK1Q9H792 1746 aa24.89■■□□□ 1.57
APBB3-219ENST00000511896 BCAR3O75815 825 aa24.88■■□□□ 1.57
APBB3-219ENST00000511896 ABTB2Q8N961 1025 aa24.87■■□□□ 1.57
APBB3-219ENST00000511896 IL16Q14005 1332 aa24.86■■□□□ 1.57
APBB3-219ENST00000511896 PAK3O75914 559 aaPredicted RBP24.86■■□□□ 1.57
APBB3-219ENST00000511896 TSHZ2Q9NRE2 1034 aa24.86■■□□□ 1.57
APBB3-219ENST00000511896 NFE2L2Q16236 605 aa24.86■■□□□ 1.57
APBB3-219ENST00000511896 CRBNQ96SW2 442 aa24.86■■□□□ 1.57
APBB3-219ENST00000511896 HSPA2P54652 639 aa24.85■■□□□ 1.57
APBB3-219ENST00000511896 NUTM2GQ5VZR2 741 aa24.85■■□□□ 1.57
APBB3-219ENST00000511896 SBNO1A3KN83 1393 aa24.84■■□□□ 1.57
APBB3-219ENST00000511896 KDM4FA0A1W2PPD8 638 aa24.84■■□□□ 1.57
APBB3-219ENST00000511896 USP54Q70EL1 1684 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms