RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 NUTM2GQ5VZR2 741 aa19.71■□□□□ 0.75
DDX41-212ENST00000511040 TESK2Q96S53 571 aa19.7■□□□□ 0.74
DDX41-212ENST00000511040 ATAD2Q6PL18 1390 aa19.69■□□□□ 0.74
DDX41-212ENST00000511040 ABCA3Q99758 1704 aa19.68■□□□□ 0.74
DDX41-212ENST00000511040 MARF1Q9Y4F3 1742 aaKnown RBP19.68■□□□□ 0.74
DDX41-212ENST00000511040 USP21Q9UK80 565 aa19.67■□□□□ 0.74
DDX41-212ENST00000511040 TMC1Q8TDI8 760 aa19.66■□□□□ 0.74
DDX41-212ENST00000511040 FNBP4Q8N3X1 1017 aaPredicted RBP19.65■□□□□ 0.74
DDX41-212ENST00000511040 ABTB2Q8N961 1025 aa19.65■□□□□ 0.74
DDX41-212ENST00000511040 QTRT2Q9H974 415 aaKnown RBP19.65■□□□□ 0.74
DDX41-212ENST00000511040 USP6P35125 1406 aa19.65■□□□□ 0.74
DDX41-212ENST00000511040 SLC12A5Q9H2X9 1139 aa19.63■□□□□ 0.73
DDX41-212ENST00000511040 FAM83GA6ND36 823 aa19.62■□□□□ 0.73
DDX41-212ENST00000511040 RXRBP28702 533 aa19.62■□□□□ 0.73
DDX41-212ENST00000511040 CRYBG1Q9Y4K1 1723 aa19.62■□□□□ 0.73
DDX41-212ENST00000511040 BCL9LQ86UU0 1499 aa19.61■□□□□ 0.73
DDX41-212ENST00000511040 AKAP12Q02952 1782 aa19.61■□□□□ 0.73
DDX41-212ENST00000511040 TMF1P82094 1093 aa19.6■□□□□ 0.73
DDX41-212ENST00000511040 ZNF692Q9BU19 519 aaPredicted RBP19.6■□□□□ 0.73
DDX41-212ENST00000511040 TRPC5Q9UL62 973 aaPredicted RBP19.6■□□□□ 0.73
DDX41-212ENST00000511040 CPSF1Q10570 1443 aaKnown RBP19.59■□□□□ 0.73
DDX41-212ENST00000511040 SSH2Q76I76 1423 aa19.59■□□□□ 0.73
DDX41-212ENST00000511040 KTN1Q86UP2 1357 aaKnown RBP19.59■□□□□ 0.73
DDX41-212ENST00000511040 TTC21BQ7Z4L5 1316 aa19.59■□□□□ 0.73
DDX41-212ENST00000511040 SLIT2O94813 1529 aa19.59■□□□□ 0.73
DDX41-212ENST00000511040 BRD4O60885 1362 aaPredicted RBP19.58■□□□□ 0.73
DDX41-212ENST00000511040 PHRF1Q9P1Y6 1649 aaKnown RBP19.58■□□□□ 0.73
DDX41-212ENST00000511040 ZC3H6P61129 1189 aaKnown RBP19.58■□□□□ 0.72
DDX41-212ENST00000511040 PUS7Q96PZ0 661 aaKnown RBP19.58■□□□□ 0.72
DDX41-212ENST00000511040 CD163L1Q9NR16 1453 aa19.58■□□□□ 0.72
DDX41-212ENST00000511040 ATRNO75882 1429 aa19.58■□□□□ 0.72
DDX41-212ENST00000511040 PLCH1Q4KWH8 1693 aa19.57■□□□□ 0.72
DDX41-212ENST00000511040 SLC24A1O60721 1099 aa19.57■□□□□ 0.72
DDX41-212ENST00000511040 NLRP6P59044 892 aa19.57■□□□□ 0.72
DDX41-212ENST00000511040 RBM6P78332 1123 aaKnown RBP19.57■□□□□ 0.72
DDX41-212ENST00000511040 NLRP13Q86W25 1043 aa19.57■□□□□ 0.72
DDX41-212ENST00000511040 UNC5CLQ8IV45 518 aa19.57■□□□□ 0.72
DDX41-212ENST00000511040 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.57■□□□□ 0.72
DDX41-212ENST00000511040 KIAA0232Q92628 1395 aa19.57■□□□□ 0.72
DDX41-212ENST00000511040 USP19O94966 1318 aa19.56■□□□□ 0.72
DDX41-212ENST00000511040 PIK3C2AO00443 1686 aa19.56■□□□□ 0.72
DDX41-212ENST00000511040 CHRNA2Q15822 529 aa19.56■□□□□ 0.72
DDX41-212ENST00000511040 HDGFL2Q7Z4V5 671 aaPredicted RBP19.56■□□□□ 0.72
DDX41-212ENST00000511040 PRDM11Q9NQV5 511 aa19.56■□□□□ 0.72
DDX41-212ENST00000511040 MON2Q7Z3U7 1717 aa19.56■□□□□ 0.72
DDX41-212ENST00000511040 HSPA5P11021 654 aaKnown RBP19.55■□□□□ 0.72
DDX41-212ENST00000511040 TERF2IPQ9NYB0 399 aa19.55■□□□□ 0.72
DDX41-212ENST00000511040 NRKQ7Z2Y5 1582 aa19.54■□□□□ 0.72
DDX41-212ENST00000511040 EIF4G2P78344 907 aaKnown RBP eCLIP19.54■□□□□ 0.72
DDX41-212ENST00000511040 BTG4Q9NY30 223 aa19.54■□□□□ 0.72
DDX41-212ENST00000511040 ZRANB1Q9UGI0 708 aa19.54■□□□□ 0.72
DDX41-212ENST00000511040 A0A1W2PP64 1363 aa19.54■□□□□ 0.72
DDX41-212ENST00000511040 COL14A1Q05707 1796 aaKnown RBP19.53■□□□□ 0.72
DDX41-212ENST00000511040 ZBTB7CA1YPR0 619 aa19.53■□□□□ 0.72
DDX41-212ENST00000511040 GCP02774 474 aa19.53■□□□□ 0.72
DDX41-212ENST00000511040 TTC21AQ8NDW8 1320 aa19.52■□□□□ 0.72
DDX41-212ENST00000511040 RGS12O14924 1447 aa19.52■□□□□ 0.72
DDX41-212ENST00000511040 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.52■□□□□ 0.72
DDX41-212ENST00000511040 NWD2Q9ULI1 1742 aa19.52■□□□□ 0.72
DDX41-212ENST00000511040 SOX12O15370 315 aa19.52■□□□□ 0.72
DDX41-212ENST00000511040 NME9Q86XW9 330 aa19.52■□□□□ 0.72
DDX41-212ENST00000511040 GJD4Q96KN9 370 aaPredicted RBP19.52■□□□□ 0.72
DDX41-212ENST00000511040 CCDC9Q9Y3X0 531 aaKnown RBP19.52■□□□□ 0.72
DDX41-212ENST00000511040 CDCA8Q53HL2 280 aa19.51■□□□□ 0.71
DDX41-212ENST00000511040 POLR3GLQ9BT43 218 aa19.51■□□□□ 0.71
DDX41-212ENST00000511040 NINLQ9Y2I6 1382 aa19.51■□□□□ 0.71
DDX41-212ENST00000511040 CDK12Q9NYV4 1490 aaPredicted RBP19.5■□□□□ 0.71
DDX41-212ENST00000511040 NRAPQ86VF7 1730 aa19.5■□□□□ 0.71
DDX41-212ENST00000511040 VPS72Q15906 364 aa19.49■□□□□ 0.71
DDX41-212ENST00000511040 SLIT3O75094 1523 aa19.49■□□□□ 0.71
DDX41-212ENST00000511040 EDC4Q6P2E9 1401 aaKnown RBP19.49■□□□□ 0.71
DDX41-212ENST00000511040 STRN4Q9NRL3 753 aa19.48■□□□□ 0.71
DDX41-212ENST00000511040 GLI3P10071 1580 aa19.48■□□□□ 0.71
DDX41-212ENST00000511040 CPDO75976 1380 aa19.47■□□□□ 0.71
DDX41-212ENST00000511040 ANKRD36BQ8N2N9 1353 aa19.46■□□□□ 0.71
DDX41-212ENST00000511040 EVA1CP58658 441 aa19.44■□□□□ 0.7
DDX41-212ENST00000511040 USP31Q70CQ4 1352 aa19.44■□□□□ 0.7
DDX41-212ENST00000511040 MYOM1P52179 1685 aa19.43■□□□□ 0.7
DDX41-212ENST00000511040 CAMTA1Q9Y6Y1 1673 aa19.43■□□□□ 0.7
DDX41-212ENST00000511040 KCNH5Q8NCM2 988 aa19.43■□□□□ 0.7
DDX41-212ENST00000511040 LMO7Q8WWI1 1683 aa19.42■□□□□ 0.7
DDX41-212ENST00000511040 NFAT5O94916 1531 aa19.41■□□□□ 0.7
DDX41-212ENST00000511040 C11orf95C9JLR9 678 aaPredicted RBP19.41■□□□□ 0.7
DDX41-212ENST00000511040 SPATA31A5Q5VU36 1347 aa19.41■□□□□ 0.7
DDX41-212ENST00000511040 SPATA31A7Q8IWB4 1347 aa19.41■□□□□ 0.7
DDX41-212ENST00000511040 A0A0G2JS52 829 aa19.4■□□□□ 0.7
DDX41-212ENST00000511040 MYT1Q01538 1121 aa19.4■□□□□ 0.7
DDX41-212ENST00000511040 FAM98CQ17RN3 349 aaKnown RBP19.4■□□□□ 0.7
DDX41-212ENST00000511040 LARP1Q6PKG0 1096 aaKnown RBP19.4■□□□□ 0.7
DDX41-212ENST00000511040 ARHGEF25Q86VW2 580 aa19.4■□□□□ 0.7
DDX41-212ENST00000511040 SEPT12Q8IYM1 358 aa19.4■□□□□ 0.7
DDX41-212ENST00000511040 USP35Q9P2H5 1018 aa19.4■□□□□ 0.7
DDX41-212ENST00000511040 AATKQ6ZMQ8 1374 aa19.4■□□□□ 0.7
DDX41-212ENST00000511040 CARD14Q9BXL6 1004 aa19.39■□□□□ 0.69
DDX41-212ENST00000511040 USP54Q70EL1 1684 aa19.39■□□□□ 0.69
DDX41-212ENST00000511040 OVOS2A0A0J9YW53 1432 aa19.38■□□□□ 0.69
DDX41-212ENST00000511040 OVOS2Q6IE36 1432 aa19.38■□□□□ 0.69
DDX41-212ENST00000511040 AXIN2Q9Y2T1 843 aa19.38■□□□□ 0.69
DDX41-212ENST00000511040 COL18A1P39060 1754 aa19.37■□□□□ 0.69
DDX41-212ENST00000511040 COL5A2P05997 1499 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms