RNA–Protein interactions for RNA: ENST00000509818.5

SEC24D-209, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-209ENST00000509818 CCDC146Q8IYE0 955 aa11.95□□□□□ -0.5
SEC24D-209ENST00000509818 CDCA7LQ96GN5 454 aa11.95□□□□□ -0.5
SEC24D-209ENST00000509818 ZNF692Q9BU19 519 aaPredicted RBP11.95□□□□□ -0.5
SEC24D-209ENST00000509818 PPP4R2Q9NY27 417 aa11.95□□□□□ -0.5
SEC24D-209ENST00000509818 RCAN3Q9UKA8 241 aa11.95□□□□□ -0.5
SEC24D-209ENST00000509818 EDC4Q6P2E9 1401 aaKnown RBP11.95□□□□□ -0.5
SEC24D-209ENST00000509818 ZNF521Q96K83 1311 aa11.95□□□□□ -0.5
SEC24D-209ENST00000509818 KIF20BQ96Q89 1820 aa11.95□□□□□ -0.5
SEC24D-209ENST00000509818 PIK3R4Q99570 1358 aa11.94□□□□□ -0.5
SEC24D-209ENST00000509818 SHPRHQ149N8 1683 aa11.94□□□□□ -0.5
SEC24D-209ENST00000509818 APAF1O14727 1248 aa11.94□□□□□ -0.5
SEC24D-209ENST00000509818 TOM1O60784 492 aa11.94□□□□□ -0.5
SEC24D-209ENST00000509818 HSPA1LP34931 641 aa11.94□□□□□ -0.5
SEC24D-209ENST00000509818 GOLGA2Q08379 1002 aa11.94□□□□□ -0.5
SEC24D-209ENST00000509818 RUNDC1Q96C34 613 aa11.94□□□□□ -0.5
SEC24D-209ENST00000509818 PTCH1Q13635 1447 aa11.94□□□□□ -0.5
SEC24D-209ENST00000509818 KCNA6P17658 529 aa11.93□□□□□ -0.5
SEC24D-209ENST00000509818 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.93□□□□□ -0.5
SEC24D-209ENST00000509818 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.93□□□□□ -0.5
SEC24D-209ENST00000509818 TMEM94Q12767 1356 aa11.93□□□□□ -0.5
SEC24D-209ENST00000509818 NWD1Q149M9 1564 aa11.93□□□□□ -0.5
SEC24D-209ENST00000509818 CDC42BPGQ6DT37 1551 aa11.93□□□□□ -0.5
SEC24D-209ENST00000509818 PRR36Q9H6K5 1346 aa11.92□□□□□ -0.5
SEC24D-209ENST00000509818 PLEKHG3A1L390 1219 aa11.91□□□□□ -0.5
SEC24D-209ENST00000509818 NCBP3Q53F19 620 aaKnown RBP11.91□□□□□ -0.5
SEC24D-209ENST00000509818 SLFN5Q08AF3 891 aa11.91□□□□□ -0.5
SEC24D-209ENST00000509818 AKAP12Q02952 1782 aa11.9□□□□□ -0.5
SEC24D-209ENST00000509818 ITSN1Q15811 1721 aa11.9□□□□□ -0.5
SEC24D-209ENST00000509818 MON2Q7Z3U7 1717 aa11.9□□□□□ -0.5
SEC24D-209ENST00000509818 U2AF1L5P0DN76 240 aaPredicted RBP11.9□□□□□ -0.5
SEC24D-209ENST00000509818 RRP1P56182 461 aaKnown RBP11.9□□□□□ -0.5
SEC24D-209ENST00000509818 U2AF1Q01081 240 aaKnown RBP eCLIP11.9□□□□□ -0.57e-7■■□□□ 12.4
SEC24D-209ENST00000509818 CHD2O14647 1828 aaKnown RBP11.9□□□□□ -0.51
SEC24D-209ENST00000509818 DUSP27Q5VZP5 1158 aa11.89□□□□□ -0.51
SEC24D-209ENST00000509818 PROSER2Q86WR7 435 aaPredicted RBP11.89□□□□□ -0.51
SEC24D-209ENST00000509818 TRMT2AQ8IZ69 625 aaKnown RBP11.89□□□□□ -0.51
SEC24D-209ENST00000509818 XRN1Q8IZH2 1706 aaKnown RBP11.89□□□□□ -0.51
SEC24D-209ENST00000509818 E9PSI1 815 aa11.89□□□□□ -0.51
SEC24D-209ENST00000509818 DIAPH1O60610 1272 aaKnown RBP11.89□□□□□ -0.51
SEC24D-209ENST00000509818 COG3Q96JB2 828 aa11.89□□□□□ -0.51
SEC24D-209ENST00000509818 PNNQ9H307 717 aaKnown RBP11.89□□□□□ -0.51
SEC24D-209ENST00000509818 PNPLA6Q8IY17 1366 aa11.89□□□□□ -0.51
SEC24D-209ENST00000509818 NKTRP30414 1462 aaKnown RBP11.89□□□□□ -0.51
SEC24D-209ENST00000509818 NME9Q86XW9 330 aa11.88□□□□□ -0.51
SEC24D-209ENST00000509818 TCP11L2Q8N4U5 519 aa11.88□□□□□ -0.51
SEC24D-209ENST00000509818 COL3A1P02461 1466 aaPredicted RBP11.88□□□□□ -0.51
SEC24D-209ENST00000509818 TOPAZ1Q8N9V7 1692 aa11.88□□□□□ -0.51
SEC24D-209ENST00000509818 CCDC27Q2M243 656 aa11.87□□□□□ -0.51
SEC24D-209ENST00000509818 WWC1Q8IX03 1113 aa11.87□□□□□ -0.51
SEC24D-209ENST00000509818 POLKQ9UBT6 870 aa11.87□□□□□ -0.51
SEC24D-209ENST00000509818 ACEP12821 1306 aa11.87□□□□□ -0.51
SEC24D-209ENST00000509818 AATKQ6ZMQ8 1374 aa11.87□□□□□ -0.51
SEC24D-209ENST00000509818 U2SURPO15042 1029 aaKnown RBP11.87□□□□□ -0.51
SEC24D-209ENST00000509818 ILDR2Q71H61 639 aa11.87□□□□□ -0.51
SEC24D-209ENST00000509818 WDR63Q8IWG1 891 aa11.86□□□□□ -0.51
SEC24D-209ENST00000509818 TTC21BQ7Z4L5 1316 aa11.86□□□□□ -0.51
SEC24D-209ENST00000509818 MAP2P11137 1827 aaKnown RBP11.85□□□□□ -0.51
SEC24D-209ENST00000509818 NUTM2FA1L443 756 aa11.85□□□□□ -0.51
SEC24D-209ENST00000509818 ANKARQ7Z5J8 1434 aa11.85□□□□□ -0.51
SEC24D-209ENST00000509818 USP6P35125 1406 aa11.84□□□□□ -0.51
SEC24D-209ENST00000509818 NEUROD2Q15784 382 aa11.84□□□□□ -0.51
SEC24D-209ENST00000509818 PLEKHF1Q96S99 279 aa11.84□□□□□ -0.51
SEC24D-209ENST00000509818 ZRANB1Q9UGI0 708 aa11.84□□□□□ -0.51
SEC24D-209ENST00000509818 PPM1GO15355 546 aaPredicted RBP11.83□□□□□ -0.52
SEC24D-209ENST00000509818 FCHSD2O94868 740 aa11.83□□□□□ -0.52
SEC24D-209ENST00000509818 RRP7AQ9Y3A4 280 aaKnown RBP11.83□□□□□ -0.52
SEC24D-209ENST00000509818 TTC21AQ8NDW8 1320 aa11.83□□□□□ -0.52
SEC24D-209ENST00000509818 MAPK8IP3Q9UPT6 1336 aa11.83□□□□□ -0.52
SEC24D-209ENST00000509818 B4GALNT3Q6L9W6 998 aa11.83□□□□□ -0.52
SEC24D-209ENST00000509818 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.83□□□□□ -0.52
SEC24D-209ENST00000509818 NGDNQ8NEJ9 315 aaKnown RBP11.83□□□□□ -0.52
SEC24D-209ENST00000509818 SPINK5Q9NQ38 1064 aaPredicted RBP11.83□□□□□ -0.52
SEC24D-209ENST00000509818 ROBO1Q9Y6N7 1651 aa11.82□□□□□ -0.52
SEC24D-209ENST00000509818 MED1Q15648 1581 aaPredicted RBP11.82□□□□□ -0.52
SEC24D-209ENST00000509818 NRKQ7Z2Y5 1582 aa11.82□□□□□ -0.52
SEC24D-209ENST00000509818 FBLN1P23142 703 aa11.82□□□□□ -0.52
SEC24D-209ENST00000509818 MSH6P52701 1360 aa11.82□□□□□ -0.52
SEC24D-209ENST00000509818 CDK12Q9NYV4 1490 aaPredicted RBP11.81□□□□□ -0.52
SEC24D-209ENST00000509818 NEFMP07197 916 aa11.81□□□□□ -0.52
SEC24D-209ENST00000509818 TMPOP42166 694 aaKnown RBP11.81□□□□□ -0.52
SEC24D-209ENST00000509818 CCDC136Q96JN2 1154 aa11.81□□□□□ -0.52
SEC24D-209ENST00000509818 EMILIN1Q9Y6C2 1016 aa11.81□□□□□ -0.52
SEC24D-209ENST00000509818 SSH2Q76I76 1423 aa11.81□□□□□ -0.52
SEC24D-209ENST00000509818 PMFBP1Q8TBY8 1022 aa11.8□□□□□ -0.52
SEC24D-209ENST00000509818 FMN2Q9NZ56 1722 aa11.8□□□□□ -0.52
SEC24D-209ENST00000509818 IL13P35225 146 aa11.8□□□□□ -0.52
SEC24D-209ENST00000509818 MYH16Q9H6N6 1097 aa11.8□□□□□ -0.52
SEC24D-209ENST00000509818 RGPD8O14715 1765 aaPredicted RBP11.8□□□□□ -0.52
SEC24D-209ENST00000509818 OVOS2A0A0J9YW53 1432 aa11.79□□□□□ -0.52
SEC24D-209ENST00000509818 OVOS2Q6IE36 1432 aa11.79□□□□□ -0.52
SEC24D-209ENST00000509818 EXOC6Q8TAG9 804 aa11.79□□□□□ -0.52
SEC24D-209ENST00000509818 SLAIN2Q9P270 581 aa11.79□□□□□ -0.52
SEC24D-209ENST00000509818 USP31Q70CQ4 1352 aa11.78□□□□□ -0.52
SEC24D-209ENST00000509818 PLIN1O60240 522 aa11.78□□□□□ -0.52
SEC24D-209ENST00000509818 RSPH6AQ9H0K4 717 aa11.78□□□□□ -0.52
SEC24D-209ENST00000509818 RRS1Q15050 365 aaKnown RBP11.78□□□□□ -0.52
SEC24D-209ENST00000509818 C14orf37Q86TY3 774 aa11.78□□□□□ -0.52
SEC24D-209ENST00000509818 NCOA3Q9Y6Q9 1424 aa11.77□□□□□ -0.52
SEC24D-209ENST00000509818 IL16Q14005 1332 aa11.77□□□□□ -0.53
SEC24D-209ENST00000509818 PRKAR2BP31323 418 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms