RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 CCDC61Q9Y6R9 512 aa22.34■■□□□ 1.17
SMAD5-205ENST00000509297 POLR3AO14802 1390 aaPredicted RBP22.34■■□□□ 1.17
SMAD5-205ENST00000509297 NRAPQ86VF7 1730 aa22.34■■□□□ 1.17
SMAD5-205ENST00000509297 CRYBG1Q9Y4K1 1723 aa22.34■■□□□ 1.17
SMAD5-205ENST00000509297 PLEKHG3A1L390 1219 aa22.32■■□□□ 1.16
SMAD5-205ENST00000509297 BTG4Q9NY30 223 aa22.32■■□□□ 1.16
SMAD5-205ENST00000509297 CCDC9Q9Y3X0 531 aaKnown RBP22.32■■□□□ 1.16
SMAD5-205ENST00000509297 TOPAZ1Q8N9V7 1692 aa22.31■■□□□ 1.16
SMAD5-205ENST00000509297 PAK3O75914 559 aaPredicted RBP22.31■■□□□ 1.16
SMAD5-205ENST00000509297 NBPF1Q3BBV0 1214 aa22.31■■□□□ 1.16
SMAD5-205ENST00000509297 BRWD3Q6RI45 1802 aa22.31■■□□□ 1.16
SMAD5-205ENST00000509297 ZRANB1Q9UGI0 708 aa22.3■■□□□ 1.16
SMAD5-205ENST00000509297 KRT27Q7Z3Y8 459 aa22.29■■□□□ 1.16
SMAD5-205ENST00000509297 NBPF8Q3BBV2 869 aa22.28■■□□□ 1.16
SMAD5-205ENST00000509297 ACEP12821 1306 aa22.28■■□□□ 1.16
SMAD5-205ENST00000509297 PRDM11Q9NQV5 511 aa22.27■■□□□ 1.16
SMAD5-205ENST00000509297 CENPJQ9HC77 1338 aaPredicted RBP22.27■■□□□ 1.16
SMAD5-205ENST00000509297 SPATA31A5Q5VU36 1347 aa22.26■■□□□ 1.15
SMAD5-205ENST00000509297 SPATA31A7Q8IWB4 1347 aa22.26■■□□□ 1.15
SMAD5-205ENST00000509297 FAM98CQ17RN3 349 aaKnown RBP22.24■■□□□ 1.15
SMAD5-205ENST00000509297 BRD4O60885 1362 aaPredicted RBP22.24■■□□□ 1.15
SMAD5-205ENST00000509297 KIAA0232Q92628 1395 aa22.24■■□□□ 1.15
SMAD5-205ENST00000509297 SF3B2Q13435 895 aaKnown RBP22.23■■□□□ 1.15
SMAD5-205ENST00000509297 L3MBTL2Q969R5 705 aa22.23■■□□□ 1.15
SMAD5-205ENST00000509297 PHRF1Q9P1Y6 1649 aaKnown RBP22.23■■□□□ 1.15
SMAD5-205ENST00000509297 SRPK2P78362 688 aaKnown RBP22.2■■□□□ 1.14
SMAD5-205ENST00000509297 PPIP5K1Q6PFW1 1433 aa22.2■■□□□ 1.14
SMAD5-205ENST00000509297 THSD7AQ9UPZ6 1657 aa22.2■■□□□ 1.14
SMAD5-205ENST00000509297 A0A0G2JS52 829 aa22.19■■□□□ 1.14
SMAD5-205ENST00000509297 MYT1Q01538 1121 aa22.19■■□□□ 1.14
SMAD5-205ENST00000509297 USP19O94966 1318 aa22.19■■□□□ 1.14
SMAD5-205ENST00000509297 CPDO75976 1380 aa22.19■■□□□ 1.14
SMAD5-205ENST00000509297 SPATA31A1Q5TZJ5 1347 aa22.18■■□□□ 1.14
SMAD5-205ENST00000509297 DEFB132Q7Z7B7 95 aa22.18■■□□□ 1.14
SMAD5-205ENST00000509297 ABTB2Q8N961 1025 aa22.18■■□□□ 1.14
SMAD5-205ENST00000509297 QRICH2Q9H0J4 1663 aa22.17■■□□□ 1.14
SMAD5-205ENST00000509297 CABP2Q9NPB3 220 aa22.17■■□□□ 1.14
SMAD5-205ENST00000509297 NRKQ7Z2Y5 1582 aa22.16■■□□□ 1.14
SMAD5-205ENST00000509297 ZC3H6P61129 1189 aaKnown RBP22.16■■□□□ 1.14
SMAD5-205ENST00000509297 CHRNA2Q15822 529 aa22.16■■□□□ 1.14
SMAD5-205ENST00000509297 NUTM2GQ5VZR2 741 aa22.16■■□□□ 1.14
SMAD5-205ENST00000509297 NLRP13Q86W25 1043 aa22.15■■□□□ 1.14
SMAD5-205ENST00000509297 TRPM1Q7Z4N2 1603 aa22.15■■□□□ 1.14
SMAD5-205ENST00000509297 SIN3AQ96ST3 1273 aa22.14■■□□□ 1.13
SMAD5-205ENST00000509297 BAG6P46379 1132 aa22.13■■□□□ 1.13
SMAD5-205ENST00000509297 USP6P35125 1406 aa22.13■■□□□ 1.13
SMAD5-205ENST00000509297 SSH2Q76I76 1423 aa22.13■■□□□ 1.13
SMAD5-205ENST00000509297 EVC2Q86UK5 1308 aa22.12■■□□□ 1.13
SMAD5-205ENST00000509297 BARGINQ6ZT62 677 aa22.12■■□□□ 1.13
SMAD5-205ENST00000509297 CABP1Q9NZU7 370 aa22.12■■□□□ 1.13
SMAD5-205ENST00000509297 LMO7Q8WWI1 1683 aa22.11■■□□□ 1.13
SMAD5-205ENST00000509297 CAMTA1Q9Y6Y1 1673 aa22.11■■□□□ 1.13
SMAD5-205ENST00000509297 GCP02774 474 aa22.11■■□□□ 1.13
SMAD5-205ENST00000509297 STRN4Q9NRL3 753 aa22.11■■□□□ 1.13
SMAD5-205ENST00000509297 DISP2A7MBM2 1401 aa22.1■■□□□ 1.13
SMAD5-205ENST00000509297 EVA1CP58658 441 aa22.1■■□□□ 1.13
SMAD5-205ENST00000509297 ROCK2O75116 1388 aaKnown RBP22.1■■□□□ 1.13
SMAD5-205ENST00000509297 RGPD1P0DJD0 1748 aa22.09■■□□□ 1.13
SMAD5-205ENST00000509297 NEUROD1Q13562 356 aa22.07■■□□□ 1.12
SMAD5-205ENST00000509297 FAM196AQ6ZSG2 479 aa22.07■■□□□ 1.12
SMAD5-205ENST00000509297 THRAP3Q9Y2W1 955 aaKnown RBP22.07■■□□□ 1.12
SMAD5-205ENST00000509297 SLIT3O75094 1523 aa22.06■■□□□ 1.12
SMAD5-205ENST00000509297 LARP1Q6PKG0 1096 aaKnown RBP22.06■■□□□ 1.12
SMAD5-205ENST00000509297 ZNF692Q9BU19 519 aaPredicted RBP22.06■■□□□ 1.12
SMAD5-205ENST00000509297 FAM182BQ5T319 152 aa22.05■■□□□ 1.12
SMAD5-205ENST00000509297 TCP11L2Q8N4U5 519 aa22.05■■□□□ 1.12
SMAD5-205ENST00000509297 COL5A2P05997 1499 aaPredicted RBP22.04■■□□□ 1.12
SMAD5-205ENST00000509297 AATKQ6ZMQ8 1374 aa22.04■■□□□ 1.12
SMAD5-205ENST00000509297 SBNO2Q9Y2G9 1366 aa22.04■■□□□ 1.12
SMAD5-205ENST00000509297 NLRP6P59044 892 aa22.04■■□□□ 1.12
SMAD5-205ENST00000509297 USP35Q9P2H5 1018 aa22.03■■□□□ 1.12
SMAD5-205ENST00000509297 TNS1Q9HBL0 1735 aaKnown RBP22.03■■□□□ 1.12
SMAD5-205ENST00000509297 EN1Q05925 392 aaPredicted RBP22.02■■□□□ 1.12
SMAD5-205ENST00000509297 PIK3C2AO00443 1686 aa22.01■■□□□ 1.11
SMAD5-205ENST00000509297 PDE3BQ13370 1112 aa22.01■■□□□ 1.11
SMAD5-205ENST00000509297 PARD3Q8TEW0 1356 aa22■■□□□ 1.11
SMAD5-205ENST00000509297 CRB1P82279 1406 aa22■■□□□ 1.11
SMAD5-205ENST00000509297 CPSF1Q10570 1443 aaKnown RBP22■■□□□ 1.11
SMAD5-205ENST00000509297 TTC21BQ7Z4L5 1316 aa22■■□□□ 1.11
SMAD5-205ENST00000509297 TTC21AQ8NDW8 1320 aa22■■□□□ 1.11
SMAD5-205ENST00000509297 LRP5O75197 1615 aa21.98■■□□□ 1.11
SMAD5-205ENST00000509297 C11orf95C9JLR9 678 aaPredicted RBP21.98■■□□□ 1.11
SMAD5-205ENST00000509297 AKAP12Q02952 1782 aa21.97■■□□□ 1.11
SMAD5-205ENST00000509297 TRIM37O94972 964 aa21.97■■□□□ 1.11
SMAD5-205ENST00000509297 KCNH5Q8NCM2 988 aa21.97■■□□□ 1.11
SMAD5-205ENST00000509297 CAMKK2Q96RR4 588 aa21.97■■□□□ 1.11
SMAD5-205ENST00000509297 PARP4Q9UKK3 1724 aaKnown RBP21.97■■□□□ 1.11
SMAD5-205ENST00000509297 COL18A1P39060 1754 aa21.95■■□□□ 1.1
SMAD5-205ENST00000509297 ARHGEF25Q86VW2 580 aa21.95■■□□□ 1.1
SMAD5-205ENST00000509297 CARD11Q9BXL7 1154 aa21.94■■□□□ 1.1
SMAD5-205ENST00000509297 PSDA5PKW4 1024 aaPredicted RBP21.93■■□□□ 1.1
SMAD5-205ENST00000509297 EZH2Q15910 746 aaKnown RBP21.93■■□□□ 1.1
SMAD5-205ENST00000509297 KTN1Q86UP2 1357 aaKnown RBP21.93■■□□□ 1.1
SMAD5-205ENST00000509297 WDR17Q8IZU2 1322 aa21.93■■□□□ 1.1
SMAD5-205ENST00000509297 APBA3O96018 575 aa21.92■■□□□ 1.1
SMAD5-205ENST00000509297 ABCC6O95255 1503 aa21.91■■□□□ 1.1
SMAD5-205ENST00000509297 TONSLQ96HA7 1378 aa21.91■■□□□ 1.1
SMAD5-205ENST00000509297 AXIN2Q9Y2T1 843 aa21.91■■□□□ 1.1
SMAD5-205ENST00000509297 USP31Q70CQ4 1352 aa21.9■■□□□ 1.1
SMAD5-205ENST00000509297 MON2Q7Z3U7 1717 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms