RNA–Protein interactions for RNA: ENST00000507588.1

FGFR3-209, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 1 (best)

Gene FGFR3, Length 336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-209ENST00000507588 SIN3AQ96ST3 1273 aa26.98■■□□□ 1.91
FGFR3-209ENST00000507588 CDK19Q9BWU1 502 aa26.98■■□□□ 1.91
FGFR3-209ENST00000507588 GJD4Q96KN9 370 aaPredicted RBP26.97■■□□□ 1.91
FGFR3-209ENST00000507588 ATAD2Q6PL18 1390 aa26.97■■□□□ 1.91
FGFR3-209ENST00000507588 CCDC61Q9Y6R9 512 aa26.93■■□□□ 1.9
FGFR3-209ENST00000507588 PLEKHG3A1L390 1219 aa26.9■■□□□ 1.9
FGFR3-209ENST00000507588 NRKQ7Z2Y5 1582 aa26.89■■□□□ 1.9
FGFR3-209ENST00000507588 ROCK2O75116 1388 aaKnown RBP26.89■■□□□ 1.9
FGFR3-209ENST00000507588 PLEKHG5O94827 1062 aa26.89■■□□□ 1.9
FGFR3-209ENST00000507588 NEUROD1Q13562 356 aa26.89■■□□□ 1.9
FGFR3-209ENST00000507588 VPS72Q15906 364 aa26.89■■□□□ 1.9
FGFR3-209ENST00000507588 PPIP5K1Q6PFW1 1433 aa26.89■■□□□ 1.89
FGFR3-209ENST00000507588 ACEP12821 1306 aa26.89■■□□□ 1.89
FGFR3-209ENST00000507588 FAM83GA6ND36 823 aa26.87■■□□□ 1.89
FGFR3-209ENST00000507588 PAK3O75914 559 aaPredicted RBP26.87■■□□□ 1.89
FGFR3-209ENST00000507588 AKAP12Q02952 1782 aa26.86■■□□□ 1.89
FGFR3-209ENST00000507588 SRPK2P78362 688 aaKnown RBP26.85■■□□□ 1.89
FGFR3-209ENST00000507588 NBPF8Q3BBV2 869 aa26.85■■□□□ 1.89
FGFR3-209ENST00000507588 BRD4O60885 1362 aaPredicted RBP26.84■■□□□ 1.89
FGFR3-209ENST00000507588 CABP2Q9NPB3 220 aa26.81■■□□□ 1.88
FGFR3-209ENST00000507588 LMO7Q8WWI1 1683 aa26.8■■□□□ 1.88
FGFR3-209ENST00000507588 THSD7AQ9UPZ6 1657 aa26.8■■□□□ 1.88
FGFR3-209ENST00000507588 BTG4Q9NY30 223 aa26.8■■□□□ 1.88
FGFR3-209ENST00000507588 ONECUT3O60422 494 aaPredicted RBP26.79■■□□□ 1.88
FGFR3-209ENST00000507588 TRIM26Q12899 539 aaPredicted RBP26.79■■□□□ 1.88
FGFR3-209ENST00000507588 SBNO2Q9Y2G9 1366 aa26.79■■□□□ 1.88
FGFR3-209ENST00000507588 USP6P35125 1406 aa26.79■■□□□ 1.88
FGFR3-209ENST00000507588 PIK3C2AO00443 1686 aa26.79■■□□□ 1.88
FGFR3-209ENST00000507588 USP19O94966 1318 aa26.78■■□□□ 1.88
FGFR3-209ENST00000507588 EVC2Q86UK5 1308 aa26.78■■□□□ 1.88
FGFR3-209ENST00000507588 KIAA0232Q92628 1395 aa26.78■■□□□ 1.88
FGFR3-209ENST00000507588 TONSLQ96HA7 1378 aa26.77■■□□□ 1.88
FGFR3-209ENST00000507588 PRDM11Q9NQV5 511 aa26.77■■□□□ 1.88
FGFR3-209ENST00000507588 MON2Q7Z3U7 1717 aa26.76■■□□□ 1.87
FGFR3-209ENST00000507588 SEPT12Q8IYM1 358 aa26.75■■□□□ 1.87
FGFR3-209ENST00000507588 CCDC9Q9Y3X0 531 aaKnown RBP26.75■■□□□ 1.87
FGFR3-209ENST00000507588 SLIT3O75094 1523 aa26.75■■□□□ 1.87
FGFR3-209ENST00000507588 SSH2Q76I76 1423 aa26.73■■□□□ 1.87
FGFR3-209ENST00000507588 CPDO75976 1380 aa26.73■■□□□ 1.87
FGFR3-209ENST00000507588 CCDC125Q86Z20 511 aa26.73■■□□□ 1.87
FGFR3-209ENST00000507588 ABTB2Q8N961 1025 aa26.73■■□□□ 1.87
FGFR3-209ENST00000507588 BLMP54132 1417 aaPredicted RBP26.72■■□□□ 1.87
FGFR3-209ENST00000507588 SPATA31A5Q5VU36 1347 aa26.71■■□□□ 1.87
FGFR3-209ENST00000507588 SPATA31A7Q8IWB4 1347 aa26.71■■□□□ 1.87
FGFR3-209ENST00000507588 NUTM2GQ5VZR2 741 aa26.71■■□□□ 1.87
FGFR3-209ENST00000507588 CABP1Q9NZU7 370 aa26.71■■□□□ 1.87
FGFR3-209ENST00000507588 CAMTA1Q9Y6Y1 1673 aa26.69■■□□□ 1.86
FGFR3-209ENST00000507588 NLRP13Q86W25 1043 aa26.68■■□□□ 1.86
FGFR3-209ENST00000507588 USP54Q70EL1 1684 aa26.68■■□□□ 1.86
FGFR3-209ENST00000507588 RGPD1P0DJD0 1748 aa26.68■■□□□ 1.86
FGFR3-209ENST00000507588 ZC3H6P61129 1189 aaKnown RBP26.67■■□□□ 1.86
FGFR3-209ENST00000507588 CPSF1Q10570 1443 aaKnown RBP26.66■■□□□ 1.86
FGFR3-209ENST00000507588 CHRNA2Q15822 529 aa26.66■■□□□ 1.86
FGFR3-209ENST00000507588 FAM98CQ17RN3 349 aaKnown RBP26.66■■□□□ 1.86
FGFR3-209ENST00000507588 KRT27Q7Z3Y8 459 aa26.66■■□□□ 1.86
FGFR3-209ENST00000507588 CARD11Q9BXL7 1154 aa26.66■■□□□ 1.86
FGFR3-209ENST00000507588 COL18A1P39060 1754 aa26.66■■□□□ 1.86
FGFR3-209ENST00000507588 SPATA31A1Q5TZJ5 1347 aa26.64■■□□□ 1.85
FGFR3-209ENST00000507588 TNS1Q9HBL0 1735 aaKnown RBP26.62■■□□□ 1.85
FGFR3-209ENST00000507588 GCP02774 474 aa26.62■■□□□ 1.85
FGFR3-209ENST00000507588 WNK3Q9BYP7 1800 aa26.62■■□□□ 1.85
FGFR3-209ENST00000507588 COL5A2P05997 1499 aaPredicted RBP26.62■■□□□ 1.85
FGFR3-209ENST00000507588 A0A0G2JS52 829 aa26.61■■□□□ 1.85
FGFR3-209ENST00000507588 MYT1Q01538 1121 aa26.61■■□□□ 1.85
FGFR3-209ENST00000507588 PARP4Q9UKK3 1724 aaKnown RBP26.61■■□□□ 1.85
FGFR3-209ENST00000507588 ZNF692Q9BU19 519 aaPredicted RBP26.6■■□□□ 1.85
FGFR3-209ENST00000507588 RGPD5Q99666 1765 aa26.6■■□□□ 1.85
FGFR3-209ENST00000507588 STRN4Q9NRL3 753 aa26.59■■□□□ 1.85
FGFR3-209ENST00000507588 CD163L1Q9NR16 1453 aa26.58■■□□□ 1.85
FGFR3-209ENST00000507588 NLRP6P59044 892 aa26.58■■□□□ 1.85
FGFR3-209ENST00000507588 TTC21AQ8NDW8 1320 aa26.58■■□□□ 1.85
FGFR3-209ENST00000507588 TTC21BQ7Z4L5 1316 aa26.57■■□□□ 1.84
FGFR3-209ENST00000507588 NFAT5O94916 1531 aa26.56■■□□□ 1.84
FGFR3-209ENST00000507588 AATKQ6ZMQ8 1374 aa26.56■■□□□ 1.84
FGFR3-209ENST00000507588 KTN1Q86UP2 1357 aaKnown RBP26.56■■□□□ 1.84
FGFR3-209ENST00000507588 ABCC6O95255 1503 aa26.55■■□□□ 1.84
FGFR3-209ENST00000507588 BARGINQ6ZT62 677 aa26.53■■□□□ 1.84
FGFR3-209ENST00000507588 LTN1O94822 1766 aa26.53■■□□□ 1.84
FGFR3-209ENST00000507588 EVA1CP58658 441 aa26.52■■□□□ 1.84
FGFR3-209ENST00000507588 CRB1P82279 1406 aa26.52■■□□□ 1.84
FGFR3-209ENST00000507588 SF3B2Q13435 895 aaKnown RBP26.52■■□□□ 1.84
FGFR3-209ENST00000507588 LARP1Q6PKG0 1096 aaKnown RBP26.51■■□□□ 1.83
FGFR3-209ENST00000507588 SRCAPQ6ZRS2 3230 aa26.51■■□□□ 1.83
FGFR3-209ENST00000507588 LRRC37A3O60309 1634 aa26.5■■□□□ 1.83
FGFR3-209ENST00000507588 PUS7Q96PZ0 661 aaKnown RBP26.5■■□□□ 1.83
FGFR3-209ENST00000507588 DISP2A7MBM2 1401 aa26.49■■□□□ 1.83
FGFR3-209ENST00000507588 DEFB132Q7Z7B7 95 aa26.49■■□□□ 1.83
FGFR3-209ENST00000507588 USP31Q70CQ4 1352 aa26.48■■□□□ 1.83
FGFR3-209ENST00000507588 TCP11L2Q8N4U5 519 aa26.48■■□□□ 1.83
FGFR3-209ENST00000507588 KCNH5Q8NCM2 988 aa26.48■■□□□ 1.83
FGFR3-209ENST00000507588 ZRANB1Q9UGI0 708 aa26.48■■□□□ 1.83
FGFR3-209ENST00000507588 THRAP3Q9Y2W1 955 aaKnown RBP26.48■■□□□ 1.83
FGFR3-209ENST00000507588 EDC4Q6P2E9 1401 aaKnown RBP26.48■■□□□ 1.83
FGFR3-209ENST00000507588 TESK2Q96S53 571 aa26.47■■□□□ 1.83
FGFR3-209ENST00000507588 USP35Q9P2H5 1018 aa26.47■■□□□ 1.83
FGFR3-209ENST00000507588 NINLQ9Y2I6 1382 aa26.46■■□□□ 1.83
FGFR3-209ENST00000507588 PEAK1Q9H792 1746 aa26.45■■□□□ 1.83
FGFR3-209ENST00000507588 A0A1W2PP64 1363 aa26.45■■□□□ 1.82
FGFR3-209ENST00000507588 SBF2Q86WG5 1849 aa26.44■■□□□ 1.82
FGFR3-209ENST00000507588 FAM182BQ5T319 152 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms