RNA–Protein interactions for RNA: ENST00000506494.1

AP001960.1-201, humanhuman

BASIC

Gene AP001960.1, Length 658 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001960.1-201ENST00000506494 RBM25P49756 843 aaKnown RBP10.46□□□□□ -0.73
AP001960.1-201ENST00000506494 USB1Q9BQ65 265 aaKnown RBP10.46□□□□□ -0.73
AP001960.1-201ENST00000506494 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.46□□□□□ -0.73
AP001960.1-201ENST00000506494 NFATC2IPQ8NCF5 419 aa10.45□□□□□ -0.74
AP001960.1-201ENST00000506494 KRTAP3-3Q9BYR6 98 aa10.45□□□□□ -0.74
AP001960.1-201ENST00000506494 KRTAP3-2Q9BYR7 98 aa10.45□□□□□ -0.74
AP001960.1-201ENST00000506494 ZC3H4Q9UPT8 1303 aaKnown RBP10.44□□□□□ -0.74
AP001960.1-201ENST00000506494 RNF19BQ6ZMZ0 732 aa10.44□□□□□ -0.74
AP001960.1-201ENST00000506494 SND1Q7KZF4 910 aaKnown RBP eCLIP10.44□□□□□ -0.74
AP001960.1-201ENST00000506494 SKIP12755 728 aa10.43□□□□□ -0.74
AP001960.1-201ENST00000506494 ZNF592Q92610 1267 aa10.43□□□□□ -0.74
AP001960.1-201ENST00000506494 ELOAQ14241 798 aaKnown RBP10.42□□□□□ -0.74
AP001960.1-201ENST00000506494 KANK4Q5T7N3 995 aaPredicted RBP10.42□□□□□ -0.74
AP001960.1-201ENST00000506494 BLOC1S3Q6QNY0 202 aa10.42□□□□□ -0.74
AP001960.1-201ENST00000506494 SALL2Q9Y467 1007 aaPredicted RBP10.42□□□□□ -0.74
AP001960.1-201ENST00000506494 USP17L3A6NCW0 530 aa10.41□□□□□ -0.74
AP001960.1-201ENST00000506494 USP17L4A6NCW7 530 aa10.41□□□□□ -0.74
AP001960.1-201ENST00000506494 BHMG1C9JSJ3 638 aaPredicted RBP10.41□□□□□ -0.74
AP001960.1-201ENST00000506494 PIK3CDO00329 1044 aa10.41□□□□□ -0.74
AP001960.1-201ENST00000506494 FMNL1O95466 1100 aaPredicted RBP10.41□□□□□ -0.74
AP001960.1-201ENST00000506494 CTHP32929 405 aa10.41□□□□□ -0.74
AP001960.1-201ENST00000506494 USP17L2Q6R6M4 530 aa10.41□□□□□ -0.74
AP001960.1-201ENST00000506494 USP17L1Q7RTZ2 530 aa10.41□□□□□ -0.74
AP001960.1-201ENST00000506494 USP17L5A8MUK1 530 aa10.4□□□□□ -0.74
AP001960.1-201ENST00000506494 TK2O00142 265 aa10.4□□□□□ -0.74
AP001960.1-201ENST00000506494 PTPRNQ16849 979 aa10.4□□□□□ -0.74
AP001960.1-201ENST00000506494 BRICD5Q6PL45 260 aa10.4□□□□□ -0.74
AP001960.1-201ENST00000506494 ZNF687Q8N1G0 1237 aa10.4□□□□□ -0.74
AP001960.1-201ENST00000506494 MYT1LQ9UL68 1186 aa10.4□□□□□ -0.74
AP001960.1-201ENST00000506494 NOVA2Q9UNW9 492 aaKnown RBP10.4□□□□□ -0.74
AP001960.1-201ENST00000506494 GOLGA8CPA6NN73 597 aa10.39□□□□□ -0.75
AP001960.1-201ENST00000506494 NR1I2O75469 434 aa10.39□□□□□ -0.75
AP001960.1-201ENST00000506494 JUNDP17535 347 aa10.39□□□□□ -0.75
AP001960.1-201ENST00000506494 PPP4CP60510 307 aa10.39□□□□□ -0.75
AP001960.1-201ENST00000506494 PLEKHM2Q8IWE5 1019 aa10.39□□□□□ -0.75
AP001960.1-201ENST00000506494 CCER1Q8TC90 406 aaPredicted RBP10.39□□□□□ -0.75
AP001960.1-201ENST00000506494 MAP10Q9P2G4 905 aa10.39□□□□□ -0.75
AP001960.1-201ENST00000506494 F12P00748 615 aaPredicted RBP10.38□□□□□ -0.75
AP001960.1-201ENST00000506494 SLFNL1Q499Z3 407 aa10.38□□□□□ -0.75
AP001960.1-201ENST00000506494 TMEM164Q5U3C3 297 aa10.38□□□□□ -0.75
AP001960.1-201ENST00000506494 ANKK1Q8NFD2 765 aa10.38□□□□□ -0.75
AP001960.1-201ENST00000506494 STAC3Q96MF2 364 aa10.38□□□□□ -0.75
AP001960.1-201ENST00000506494 GNEQ9Y223 722 aaKnown RBP10.38□□□□□ -0.75
AP001960.1-201ENST00000506494 E9PSI1 815 aa10.37□□□□□ -0.75
AP001960.1-201ENST00000506494 PTK2Q05397 1052 aa10.37□□□□□ -0.75
AP001960.1-201ENST00000506494 LARP1Q6PKG0 1096 aaKnown RBP10.37□□□□□ -0.75
AP001960.1-201ENST00000506494 SCUBE3Q8IX30 993 aa10.37□□□□□ -0.75
AP001960.1-201ENST00000506494 ARMC2Q8NEN0 867 aa10.37□□□□□ -0.75
AP001960.1-201ENST00000506494 STK32AQ8WU08 396 aa10.37□□□□□ -0.75
AP001960.1-201ENST00000506494 RNF166Q96A37 237 aaPredicted RBP10.37□□□□□ -0.75
AP001960.1-201ENST00000506494 ZNF428Q96B54 188 aa10.37□□□□□ -0.75
AP001960.1-201ENST00000506494 PCDHB3Q9Y5E6 796 aa10.37□□□□□ -0.75
AP001960.1-201ENST00000506494 POTEB3A0JP26 581 aa10.36□□□□□ -0.75
AP001960.1-201ENST00000506494 MCCD1P59942 119 aaPredicted RBP10.36□□□□□ -0.75
AP001960.1-201ENST00000506494 POTEBQ6S5H4 581 aa10.36□□□□□ -0.75
AP001960.1-201ENST00000506494 DEPDC4Q8N2C3 294 aa10.36□□□□□ -0.75
AP001960.1-201ENST00000506494 ZMIZ1Q9ULJ6 1067 aa10.36□□□□□ -0.75
AP001960.1-201ENST00000506494 GPSM3Q9Y4H4 160 aa10.36□□□□□ -0.75
AP001960.1-201ENST00000506494 FAM196BA6NMK8 535 aa10.35□□□□□ -0.75
AP001960.1-201ENST00000506494 MKRN1Q9UHC7 482 aaKnown RBP10.35□□□□□ -0.75
AP001960.1-201ENST00000506494 HPS5Q9UPZ3 1129 aa10.35□□□□□ -0.75
AP001960.1-201ENST00000506494 AMOTL2Q9Y2J4 779 aa10.35□□□□□ -0.75
AP001960.1-201ENST00000506494 USP17L15C9J2P7 530 aa10.34□□□□□ -0.75
AP001960.1-201ENST00000506494 USP17L10C9JJH3 530 aa10.34□□□□□ -0.75
AP001960.1-201ENST00000506494 USP17L13C9JLJ4 530 aa10.34□□□□□ -0.75
AP001960.1-201ENST00000506494 USP17L12C9JPN9 530 aa10.34□□□□□ -0.75
AP001960.1-201ENST00000506494 USP17L11C9JVI0 530 aa10.34□□□□□ -0.75
AP001960.1-201ENST00000506494 USP17L21D6R901 530 aa10.34□□□□□ -0.75
AP001960.1-201ENST00000506494 USP17L18D6R9N7 530 aa10.34□□□□□ -0.75
AP001960.1-201ENST00000506494 USP17L22D6RA61 530 aa10.34□□□□□ -0.75
AP001960.1-201ENST00000506494 USP17L17D6RBQ6 530 aa10.34□□□□□ -0.75
AP001960.1-201ENST00000506494 USP17L19D6RCP7 530 aa10.34□□□□□ -0.75
AP001960.1-201ENST00000506494 USP17L20D6RJB6 530 aa10.34□□□□□ -0.75
AP001960.1-201ENST00000506494 USP17L24Q0WX57 530 aa10.34□□□□□ -0.75
AP001960.1-201ENST00000506494 RNF135Q8IUD6 432 aa10.34□□□□□ -0.75
AP001960.1-201ENST00000506494 GPKOWQ92917 476 aaPredicted RBP eCLIP10.34□□□□□ -0.75
AP001960.1-201ENST00000506494 PCDHB9Q9Y5E1 797 aa10.34□□□□□ -0.75
AP001960.1-201ENST00000506494 ATP5J2-PTCD1G3V325 749 aa10.33□□□□□ -0.76
AP001960.1-201ENST00000506494 CCNYL3P0C7X3 344 aa10.33□□□□□ -0.76
AP001960.1-201ENST00000506494 RASA1P20936 1047 aa10.33□□□□□ -0.76
AP001960.1-201ENST00000506494 NBPF14Q5TI25 921 aa10.33□□□□□ -0.76
AP001960.1-201ENST00000506494 FAM174AQ8TBP5 190 aa10.33□□□□□ -0.76
AP001960.1-201ENST00000506494 CEP126Q9P2H0 1117 aa10.33□□□□□ -0.76
AP001960.1-201ENST00000506494 LZTS3O60299 673 aaPredicted RBP10.32□□□□□ -0.76
AP001960.1-201ENST00000506494 APLP1P51693 650 aa10.32□□□□□ -0.76
AP001960.1-201ENST00000506494 NCOA4Q13772 614 aa10.32□□□□□ -0.76
AP001960.1-201ENST00000506494 PDXDC2PQ6P474 469 aa10.32□□□□□ -0.76
AP001960.1-201ENST00000506494 ADGRD1Q6QNK2 874 aa10.32□□□□□ -0.76
AP001960.1-201ENST00000506494 FAM200AQ8TCP9 573 aa10.32□□□□□ -0.76
AP001960.1-201ENST00000506494 THAP11Q96EK4 314 aa10.32□□□□□ -0.76
AP001960.1-201ENST00000506494 SOWAHBA6NEL2 793 aa10.31□□□□□ -0.76
AP001960.1-201ENST00000506494 CRTC2Q53ET0 693 aaPredicted RBP10.31□□□□□ -0.76
AP001960.1-201ENST00000506494 NUDT12Q9BQG2 462 aa10.31□□□□□ -0.76
AP001960.1-201ENST00000506494 TSR3Q9UJK0 312 aaKnown RBP10.31□□□□□ -0.76
AP001960.1-201ENST00000506494 ARID4AP29374 1257 aaPredicted RBP10.3□□□□□ -0.76
AP001960.1-201ENST00000506494 MSS51Q4VC12 460 aa10.3□□□□□ -0.76
AP001960.1-201ENST00000506494 PLPP7Q8NBV4 271 aa10.3□□□□□ -0.76
AP001960.1-201ENST00000506494 EVA1BQ9NVM1 165 aa10.3□□□□□ -0.76
AP001960.1-201ENST00000506494 KCNH2Q12809 1159 aa10.29□□□□□ -0.76
AP001960.1-201ENST00000506494 EML3Q32P44 896 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms