RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 TTC21BQ7Z4L5 1316 aa16.04■□□□□ 0.16
POLR2J3-211ENST00000506060 ATF3P18847 181 aa16.04■□□□□ 0.16
POLR2J3-211ENST00000506060 PHF8Q9UPP1 1060 aa16.04■□□□□ 0.16
POLR2J3-211ENST00000506060 MTHFSP49914 203 aa16.03■□□□□ 0.16
POLR2J3-211ENST00000506060 PMFBP1Q8TBY8 1022 aa16.03■□□□□ 0.16
POLR2J3-211ENST00000506060 TMEM94Q12767 1356 aa16.02■□□□□ 0.16
POLR2J3-211ENST00000506060 NUDCQ9Y266 331 aa16.02■□□□□ 0.16
POLR2J3-211ENST00000506060 MSH6P52701 1360 aa16.01■□□□□ 0.15
POLR2J3-211ENST00000506060 NRKQ7Z2Y5 1582 aa16.01■□□□□ 0.15
POLR2J3-211ENST00000506060 CADPS2Q86UW7 1296 aa16.01■□□□□ 0.15
POLR2J3-211ENST00000506060 NME9Q86XW9 330 aa16.01■□□□□ 0.15
POLR2J3-211ENST00000506060 ESCO1Q5FWF5 840 aa16■□□□□ 0.15
POLR2J3-211ENST00000506060 RBM33Q96EV2 1170 aaKnown RBP16■□□□□ 0.15
POLR2J3-211ENST00000506060 AATKQ6ZMQ8 1374 aa16■□□□□ 0.15
POLR2J3-211ENST00000506060 STRCP1A6NGW2 1772 aa15.99■□□□□ 0.15
POLR2J3-211ENST00000506060 BLMP54132 1417 aaPredicted RBP15.99■□□□□ 0.15
POLR2J3-211ENST00000506060 KIF1AQ12756 1690 aa15.99■□□□□ 0.15
POLR2J3-211ENST00000506060 SSH2Q76I76 1423 aa15.98■□□□□ 0.15
POLR2J3-211ENST00000506060 NGEFQ8N5V2 710 aa15.98■□□□□ 0.15
POLR2J3-211ENST00000506060 ADAMTS8Q9UP79 889 aa15.98■□□□□ 0.15
POLR2J3-211ENST00000506060 PSME1Q06323 249 aa15.97■□□□□ 0.15
POLR2J3-211ENST00000506060 USP31Q70CQ4 1352 aa15.97■□□□□ 0.15
POLR2J3-211ENST00000506060 PNNQ9H307 717 aaKnown RBP15.96■□□□□ 0.15
POLR2J3-211ENST00000506060 C1orf167Q5SNV9 1468 aa15.96■□□□□ 0.14
POLR2J3-211ENST00000506060 OVOS2A0A0J9YW53 1432 aa15.95■□□□□ 0.14
POLR2J3-211ENST00000506060 OVOS2Q6IE36 1432 aa15.95■□□□□ 0.14
POLR2J3-211ENST00000506060 MAP2P11137 1827 aaKnown RBP15.95■□□□□ 0.14
POLR2J3-211ENST00000506060 PAK3O75914 559 aaPredicted RBP15.94■□□□□ 0.14
POLR2J3-211ENST00000506060 POLKQ9UBT6 870 aa15.94■□□□□ 0.14
POLR2J3-211ENST00000506060 PNPLA6Q8IY17 1366 aa15.93■□□□□ 0.14
POLR2J3-211ENST00000506060 DIAPH1O60610 1272 aaKnown RBP15.93■□□□□ 0.14
POLR2J3-211ENST00000506060 PDE3BQ13370 1112 aa15.93■□□□□ 0.14
POLR2J3-211ENST00000506060 LRRC7Q96NW7 1537 aa15.93■□□□□ 0.14
POLR2J3-211ENST00000506060 SMG6Q86US8 1419 aaKnown RBP15.93■□□□□ 0.14
POLR2J3-211ENST00000506060 ZNF335Q9H4Z2 1342 aaPredicted RBP15.93■□□□□ 0.14
POLR2J3-211ENST00000506060 CDK12Q9NYV4 1490 aaPredicted RBP15.92■□□□□ 0.14
POLR2J3-211ENST00000506060 NLRP6P59044 892 aa15.92■□□□□ 0.14
POLR2J3-211ENST00000506060 ABTB2Q8N961 1025 aa15.92■□□□□ 0.14
POLR2J3-211ENST00000506060 MST1RQ04912 1400 aa15.92■□□□□ 0.14
POLR2J3-211ENST00000506060 SHPRHQ149N8 1683 aa15.92■□□□□ 0.14
POLR2J3-211ENST00000506060 USP54Q70EL1 1684 aa15.92■□□□□ 0.14
POLR2J3-211ENST00000506060 PPM1GO15355 546 aaPredicted RBP15.91■□□□□ 0.14
POLR2J3-211ENST00000506060 U2AF1L5P0DN76 240 aaPredicted RBP15.91■□□□□ 0.14
POLR2J3-211ENST00000506060 U2AF1Q01081 240 aaKnown RBP eCLIP15.91■□□□□ 0.14
POLR2J3-211ENST00000506060 ORAI2Q96SN7 254 aa15.91■□□□□ 0.14
POLR2J3-211ENST00000506060 ZRANB1Q9UGI0 708 aa15.91■□□□□ 0.14
POLR2J3-211ENST00000506060 NEFMP07197 916 aa15.9■□□□□ 0.14
POLR2J3-211ENST00000506060 RUNDC1Q96C34 613 aa15.9■□□□□ 0.14
POLR2J3-211ENST00000506060 PIK3C2AO00443 1686 aa15.89■□□□□ 0.13
POLR2J3-211ENST00000506060 U2SURPO15042 1029 aaKnown RBP15.89■□□□□ 0.13
POLR2J3-211ENST00000506060 COL3A1P02461 1466 aaPredicted RBP15.89■□□□□ 0.13
POLR2J3-211ENST00000506060 NPHP3Q7Z494 1330 aa15.89■□□□□ 0.13
POLR2J3-211ENST00000506060 XIRP1Q702N8 1843 aaKnown RBP15.89■□□□□ 0.13
POLR2J3-211ENST00000506060 KIF24Q5T7B8 1368 aa15.88■□□□□ 0.13
POLR2J3-211ENST00000506060 FOXO3O43524 673 aa15.88■□□□□ 0.13
POLR2J3-211ENST00000506060 KRT28Q7Z3Y7 464 aa15.88■□□□□ 0.13
POLR2J3-211ENST00000506060 KCNH5Q8NCM2 988 aa15.87■□□□□ 0.13
POLR2J3-211ENST00000506060 EMILIN1Q9Y6C2 1016 aa15.87■□□□□ 0.13
POLR2J3-211ENST00000506060 NCBP3Q53F19 620 aaKnown RBP15.86■□□□□ 0.13
POLR2J3-211ENST00000506060 SBNO1A3KN83 1393 aa15.86■□□□□ 0.13
POLR2J3-211ENST00000506060 FCHSD2O94868 740 aa15.85■□□□□ 0.13
POLR2J3-211ENST00000506060 AMPHP49418 695 aa15.85■□□□□ 0.13
POLR2J3-211ENST00000506060 RRS1Q15050 365 aaKnown RBP15.85■□□□□ 0.13
POLR2J3-211ENST00000506060 CCDC146Q8IYE0 955 aa15.85■□□□□ 0.13
POLR2J3-211ENST00000506060 MAPK8IP3Q9UPT6 1336 aa15.85■□□□□ 0.13
POLR2J3-211ENST00000506060 FLT4P35916 1363 aa15.85■□□□□ 0.13
POLR2J3-211ENST00000506060 SLAIN2Q9P270 581 aa15.84■□□□□ 0.13
POLR2J3-211ENST00000506060 APAF1O14727 1248 aa15.83■□□□□ 0.12
POLR2J3-211ENST00000506060 NEFLP07196 543 aa15.83■□□□□ 0.12
POLR2J3-211ENST00000506060 SALL2Q9Y467 1007 aaPredicted RBP15.83■□□□□ 0.12
POLR2J3-211ENST00000506060 RTL1A6NKG5 1358 aa15.83■□□□□ 0.12
POLR2J3-211ENST00000506060 TRPM3Q9HCF6 1732 aaPredicted RBP15.82■□□□□ 0.12
POLR2J3-211ENST00000506060 SOX12O15370 315 aa15.82■□□□□ 0.12
POLR2J3-211ENST00000506060 NUTM2GQ5VZR2 741 aa15.82■□□□□ 0.12
POLR2J3-211ENST00000506060 LMOD2Q6P5Q4 547 aa15.82■□□□□ 0.12
POLR2J3-211ENST00000506060 MAP3K19Q56UN5 1328 aa15.82■□□□□ 0.12
POLR2J3-211ENST00000506060 FBLN1P23142 703 aa15.81■□□□□ 0.12
POLR2J3-211ENST00000506060 IL13P35225 146 aa15.81■□□□□ 0.12
POLR2J3-211ENST00000506060 ARHGEF10O15013 1369 aa15.8■□□□□ 0.12
POLR2J3-211ENST00000506060 GOLGA2Q08379 1002 aa15.8■□□□□ 0.12
POLR2J3-211ENST00000506060 TCP11L2Q8N4U5 519 aa15.8■□□□□ 0.12
POLR2J3-211ENST00000506060 MARF1Q9Y4F3 1742 aaKnown RBP15.8■□□□□ 0.12
POLR2J3-211ENST00000506060 XPCQ01831 940 aaPredicted RBP15.79■□□□□ 0.12
POLR2J3-211ENST00000506060 CCDC27Q2M243 656 aa15.79■□□□□ 0.12
POLR2J3-211ENST00000506060 BRINP3Q76B58 766 aa15.79■□□□□ 0.12
POLR2J3-211ENST00000506060 GTF3C3Q9Y5Q9 886 aa15.79■□□□□ 0.12
POLR2J3-211ENST00000506060 USP19O94966 1318 aa15.78■□□□□ 0.12
POLR2J3-211ENST00000506060 ALS2Q96Q42 1657 aa15.78■□□□□ 0.12
POLR2J3-211ENST00000506060 TNS3Q68CZ2 1445 aa15.77■□□□□ 0.12
POLR2J3-211ENST00000506060 EIF4A2Q14240 407 aaKnown RBP15.77■□□□□ 0.12
POLR2J3-211ENST00000506060 AEBP2Q6ZN18 517 aaPredicted RBP15.77■□□□□ 0.12
POLR2J3-211ENST00000506060 SLIT3O75094 1523 aa15.77■□□□□ 0.11
POLR2J3-211ENST00000506060 IQSEC2Q5JU85 1478 aa15.77■□□□□ 0.11
POLR2J3-211ENST00000506060 PEAK1Q9H792 1746 aa15.77■□□□□ 0.11
POLR2J3-211ENST00000506060 ZNF521Q96K83 1311 aa15.76■□□□□ 0.11
POLR2J3-211ENST00000506060 GCP02774 474 aa15.76■□□□□ 0.11
POLR2J3-211ENST00000506060 HSP90AB2PQ58FF8 381 aa15.76■□□□□ 0.11
POLR2J3-211ENST00000506060 WDR63Q8IWG1 891 aa15.76■□□□□ 0.11
POLR2J3-211ENST00000506060 PLEKHF1Q96S99 279 aa15.76■□□□□ 0.11
POLR2J3-211ENST00000506060 RSPH6AQ9H0K4 717 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms