RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 CDK19Q9BWU1 502 aa14.95□□□□□ -0.02
NR1I3-222ENST00000506018 SLIT2O94813 1529 aa14.95□□□□□ -0.02
NR1I3-222ENST00000506018 CENPJQ9HC77 1338 aaPredicted RBP14.95□□□□□ -0.02
NR1I3-222ENST00000506018 TRIM26Q12899 539 aaPredicted RBP14.94□□□□□ -0.02
NR1I3-222ENST00000506018 NBPF1Q3BBV0 1214 aa14.94□□□□□ -0.02
NR1I3-222ENST00000506018 CABLES1Q8TDN4 633 aa14.94□□□□□ -0.02
NR1I3-222ENST00000506018 GJD4Q96KN9 370 aaPredicted RBP14.94□□□□□ -0.02
NR1I3-222ENST00000506018 QRICH2Q9H0J4 1663 aa14.94□□□□□ -0.02
NR1I3-222ENST00000506018 CCDC61Q9Y6R9 512 aa14.93□□□□□ -0.02
NR1I3-222ENST00000506018 TOPAZ1Q8N9V7 1692 aa14.93□□□□□ -0.02
NR1I3-222ENST00000506018 TRPM1Q7Z4N2 1603 aa14.92□□□□□ -0.02
NR1I3-222ENST00000506018 SRPK2P78362 688 aaKnown RBP14.92□□□□□ -0.02
NR1I3-222ENST00000506018 SIN3AQ96ST3 1273 aa14.92□□□□□ -0.02
NR1I3-222ENST00000506018 CCDC9Q9Y3X0 531 aaKnown RBP14.91□□□□□ -0.02
NR1I3-222ENST00000506018 COL14A1Q05707 1796 aaKnown RBP14.91□□□□□ -0.02
NR1I3-222ENST00000506018 ROCK2O75116 1388 aaKnown RBP14.9□□□□□ -0.02
NR1I3-222ENST00000506018 RALGAPBQ86X10 1494 aa14.89□□□□□ -0.03
NR1I3-222ENST00000506018 POLR3AO14802 1390 aaPredicted RBP14.88□□□□□ -0.03
NR1I3-222ENST00000506018 ACEP12821 1306 aa14.88□□□□□ -0.03
NR1I3-222ENST00000506018 VPS72Q15906 364 aa14.88□□□□□ -0.03
NR1I3-222ENST00000506018 CRYBG1Q9Y4K1 1723 aa14.88□□□□□ -0.03
NR1I3-222ENST00000506018 GLI3P10071 1580 aa14.88□□□□□ -0.03
NR1I3-222ENST00000506018 PLEKHG3A1L390 1219 aa14.87□□□□□ -0.03
NR1I3-222ENST00000506018 PPIP5K1Q6PFW1 1433 aa14.87□□□□□ -0.03
NR1I3-222ENST00000506018 EVC2Q86UK5 1308 aa14.87□□□□□ -0.03
NR1I3-222ENST00000506018 NBPF8Q3BBV2 869 aa14.86□□□□□ -0.03
NR1I3-222ENST00000506018 NRAPQ86VF7 1730 aa14.86□□□□□ -0.03
NR1I3-222ENST00000506018 TONSLQ96HA7 1378 aa14.86□□□□□ -0.03
NR1I3-222ENST00000506018 PHRF1Q9P1Y6 1649 aaKnown RBP14.86□□□□□ -0.03
NR1I3-222ENST00000506018 FAM83GA6ND36 823 aa14.85□□□□□ -0.03
NR1I3-222ENST00000506018 CCDC125Q86Z20 511 aa14.85□□□□□ -0.03
NR1I3-222ENST00000506018 PRDM11Q9NQV5 511 aa14.85□□□□□ -0.03
NR1I3-222ENST00000506018 BTG4Q9NY30 223 aa14.85□□□□□ -0.03
NR1I3-222ENST00000506018 BRD4O60885 1362 aaPredicted RBP14.85□□□□□ -0.03
NR1I3-222ENST00000506018 BRWD3Q6RI45 1802 aa14.85□□□□□ -0.03
NR1I3-222ENST00000506018 ABTB2Q8N961 1025 aa14.85□□□□□ -0.03
NR1I3-222ENST00000506018 CABP2Q9NPB3 220 aa14.85□□□□□ -0.03
NR1I3-222ENST00000506018 A0A0G2JS52 829 aa14.84□□□□□ -0.03
NR1I3-222ENST00000506018 MYT1Q01538 1121 aa14.84□□□□□ -0.03
NR1I3-222ENST00000506018 NLRP13Q86W25 1043 aa14.82□□□□□ -0.04
NR1I3-222ENST00000506018 SEPT12Q8IYM1 358 aa14.82□□□□□ -0.04
NR1I3-222ENST00000506018 NUTM2GQ5VZR2 741 aa14.81□□□□□ -0.04
NR1I3-222ENST00000506018 ONECUT3O60422 494 aaPredicted RBP14.8□□□□□ -0.04
NR1I3-222ENST00000506018 SF3B2Q13435 895 aaKnown RBP14.8□□□□□ -0.04
NR1I3-222ENST00000506018 CARD11Q9BXL7 1154 aa14.8□□□□□ -0.04
NR1I3-222ENST00000506018 CABP1Q9NZU7 370 aa14.8□□□□□ -0.04
NR1I3-222ENST00000506018 KIAA0232Q92628 1395 aa14.8□□□□□ -0.04
NR1I3-222ENST00000506018 ZC3H6P61129 1189 aaKnown RBP14.79□□□□□ -0.04
NR1I3-222ENST00000506018 KRT27Q7Z3Y8 459 aa14.79□□□□□ -0.04
NR1I3-222ENST00000506018 NRKQ7Z2Y5 1582 aa14.79□□□□□ -0.04
NR1I3-222ENST00000506018 USP6P35125 1406 aa14.78□□□□□ -0.04
NR1I3-222ENST00000506018 ZNF692Q9BU19 519 aaPredicted RBP14.78□□□□□ -0.04
NR1I3-222ENST00000506018 SPATA31A5Q5VU36 1347 aa14.78□□□□□ -0.04
NR1I3-222ENST00000506018 SPATA31A7Q8IWB4 1347 aa14.78□□□□□ -0.04
NR1I3-222ENST00000506018 EP400Q96L91 3159 aa14.78□□□□□ -0.04
NR1I3-222ENST00000506018 AKAP12Q02952 1782 aa14.77□□□□□ -0.04
NR1I3-222ENST00000506018 EVA1CP58658 441 aa14.77□□□□□ -0.04
NR1I3-222ENST00000506018 FAM98CQ17RN3 349 aaKnown RBP14.77□□□□□ -0.04
NR1I3-222ENST00000506018 BLMP54132 1417 aaPredicted RBP14.77□□□□□ -0.05
NR1I3-222ENST00000506018 SBNO2Q9Y2G9 1366 aa14.76□□□□□ -0.05
NR1I3-222ENST00000506018 CHRNA2Q15822 529 aa14.76□□□□□ -0.05
NR1I3-222ENST00000506018 PCGF6Q9BYE7 350 aa14.76□□□□□ -0.05
NR1I3-222ENST00000506018 STRN4Q9NRL3 753 aa14.76□□□□□ -0.05
NR1I3-222ENST00000506018 USP19O94966 1318 aa14.76□□□□□ -0.05
NR1I3-222ENST00000506018 CPDO75976 1380 aa14.75□□□□□ -0.05
NR1I3-222ENST00000506018 NLRP6P59044 892 aa14.75□□□□□ -0.05
NR1I3-222ENST00000506018 GCP02774 474 aa14.74□□□□□ -0.05
NR1I3-222ENST00000506018 SLC24A1O60721 1099 aa14.73□□□□□ -0.05
NR1I3-222ENST00000506018 ZRANB1Q9UGI0 708 aa14.73□□□□□ -0.05
NR1I3-222ENST00000506018 SPATA31A1Q5TZJ5 1347 aa14.73□□□□□ -0.05
NR1I3-222ENST00000506018 PIK3C2AO00443 1686 aa14.72□□□□□ -0.05
NR1I3-222ENST00000506018 THSD7AQ9UPZ6 1657 aa14.72□□□□□ -0.05
NR1I3-222ENST00000506018 TTC21AQ8NDW8 1320 aa14.72□□□□□ -0.05
NR1I3-222ENST00000506018 SSH2Q76I76 1423 aa14.72□□□□□ -0.05
NR1I3-222ENST00000506018 LMO7Q8WWI1 1683 aa14.72□□□□□ -0.05
NR1I3-222ENST00000506018 RGPD1P0DJD0 1748 aa14.72□□□□□ -0.05
NR1I3-222ENST00000506018 KTN1Q86UP2 1357 aaKnown RBP14.71□□□□□ -0.05
NR1I3-222ENST00000506018 MON2Q7Z3U7 1717 aa14.71□□□□□ -0.05
NR1I3-222ENST00000506018 SLIT3O75094 1523 aa14.71□□□□□ -0.06
NR1I3-222ENST00000506018 ZBTB7CA1YPR0 619 aa14.71□□□□□ -0.06
NR1I3-222ENST00000506018 KCNH5Q8NCM2 988 aa14.71□□□□□ -0.06
NR1I3-222ENST00000506018 CAMTA1Q9Y6Y1 1673 aa14.7□□□□□ -0.06
NR1I3-222ENST00000506018 USP35Q9P2H5 1018 aa14.7□□□□□ -0.06
NR1I3-222ENST00000506018 TTC21BQ7Z4L5 1316 aa14.7□□□□□ -0.06
NR1I3-222ENST00000506018 BAG6P46379 1132 aa14.69□□□□□ -0.06
NR1I3-222ENST00000506018 BARGINQ6ZT62 677 aa14.69□□□□□ -0.06
NR1I3-222ENST00000506018 HDGFL2Q7Z4V5 671 aaPredicted RBP14.69□□□□□ -0.06
NR1I3-222ENST00000506018 TCP11L2Q8N4U5 519 aa14.69□□□□□ -0.06
NR1I3-222ENST00000506018 TMC1Q8TDI8 760 aa14.69□□□□□ -0.06
NR1I3-222ENST00000506018 THRAP3Q9Y2W1 955 aaKnown RBP14.69□□□□□ -0.06
NR1I3-222ENST00000506018 CPSF1Q10570 1443 aaKnown RBP14.69□□□□□ -0.06
NR1I3-222ENST00000506018 PDE3BQ13370 1112 aa14.68□□□□□ -0.06
NR1I3-222ENST00000506018 PUS7Q96PZ0 661 aaKnown RBP14.68□□□□□ -0.06
NR1I3-222ENST00000506018 AATKQ6ZMQ8 1374 aa14.68□□□□□ -0.06
NR1I3-222ENST00000506018 LARP1Q6PKG0 1096 aaKnown RBP14.67□□□□□ -0.06
NR1I3-222ENST00000506018 TERF2IPQ9NYB0 399 aa14.67□□□□□ -0.06
NR1I3-222ENST00000506018 COL5A2P05997 1499 aaPredicted RBP14.67□□□□□ -0.06
NR1I3-222ENST00000506018 CRB1P82279 1406 aa14.66□□□□□ -0.06
NR1I3-222ENST00000506018 FAM196AQ6ZSG2 479 aa14.66□□□□□ -0.06
NR1I3-222ENST00000506018 NINLQ9Y2I6 1382 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms