RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 C14orf93Q9H972 538 aaKnown RBP23.7■■□□□ 1.38
PDLIM7-213ENST00000505074 GPRASP1Q5JY77 1395 aa23.69■■□□□ 1.38
PDLIM7-213ENST00000505074 FAM196AQ6ZSG2 479 aa23.69■■□□□ 1.38
PDLIM7-213ENST00000505074 PRAM1Q96QH2 718 aa23.69■■□□□ 1.38
PDLIM7-213ENST00000505074 PARD3Q8TEW0 1356 aa23.68■■□□□ 1.38
PDLIM7-213ENST00000505074 TRIM37O94972 964 aa23.68■■□□□ 1.38
PDLIM7-213ENST00000505074 CRYBG1Q9Y4K1 1723 aa23.67■■□□□ 1.38
PDLIM7-213ENST00000505074 APBA3O96018 575 aa23.66■■□□□ 1.38
PDLIM7-213ENST00000505074 POGKQ9P215 609 aa23.66■■□□□ 1.38
PDLIM7-213ENST00000505074 RREB1Q92766 1687 aa23.65■■□□□ 1.38
PDLIM7-213ENST00000505074 PRDM11Q9NQV5 511 aa23.65■■□□□ 1.38
PDLIM7-213ENST00000505074 ACIN1Q9UKV3 1341 aaKnown RBP23.64■■□□□ 1.38
PDLIM7-213ENST00000505074 CFAP70Q5T0N1 1121 aa23.64■■□□□ 1.37
PDLIM7-213ENST00000505074 SPATA31A1Q5TZJ5 1347 aa23.63■■□□□ 1.37
PDLIM7-213ENST00000505074 DCAF8L1A6NGE4 600 aa23.63■■□□□ 1.37
PDLIM7-213ENST00000505074 NBPF8Q3BBV2 869 aa23.63■■□□□ 1.37
PDLIM7-213ENST00000505074 NUP188Q5SRE5 1749 aa23.63■■□□□ 1.37
PDLIM7-213ENST00000505074 NBPF14Q5TI25 921 aa23.63■■□□□ 1.37
PDLIM7-213ENST00000505074 DLC1Q96QB1 1528 aa23.63■■□□□ 1.37
PDLIM7-213ENST00000505074 EIF3AQ14152 1382 aaKnown RBP23.61■■□□□ 1.37
PDLIM7-213ENST00000505074 PAK3O75914 559 aaPredicted RBP23.6■■□□□ 1.37
PDLIM7-213ENST00000505074 PPP1R1BQ9UD71 204 aaPredicted RBP23.6■■□□□ 1.37
PDLIM7-213ENST00000505074 RAB3GAP2Q9H2M9 1393 aa23.6■■□□□ 1.37
PDLIM7-213ENST00000505074 STRN4Q9NRL3 753 aa23.58■■□□□ 1.37
PDLIM7-213ENST00000505074 PDE3BQ13370 1112 aa23.57■■□□□ 1.36
PDLIM7-213ENST00000505074 NGDNQ8NEJ9 315 aaKnown RBP23.57■■□□□ 1.36
PDLIM7-213ENST00000505074 HIRIP3Q9BW71 556 aaPredicted RBP23.57■■□□□ 1.36
PDLIM7-213ENST00000505074 SPON1Q9HCB6 807 aa23.57■■□□□ 1.36
PDLIM7-213ENST00000505074 TULP4Q9NRJ4 1543 aa23.57■■□□□ 1.36
PDLIM7-213ENST00000505074 KIAA0232Q92628 1395 aa23.56■■□□□ 1.36
PDLIM7-213ENST00000505074 PRR36Q9H6K5 1346 aa23.55■■□□□ 1.36
PDLIM7-213ENST00000505074 PHRF1Q9P1Y6 1649 aaKnown RBP23.55■■□□□ 1.36
PDLIM7-213ENST00000505074 CHRNA2Q15822 529 aa23.54■■□□□ 1.36
PDLIM7-213ENST00000505074 USP35Q9P2H5 1018 aa23.54■■□□□ 1.36
PDLIM7-213ENST00000505074 MINK1Q8N4C8 1332 aaPredicted RBP23.54■■□□□ 1.36
PDLIM7-213ENST00000505074 NINLQ9Y2I6 1382 aa23.53■■□□□ 1.36
PDLIM7-213ENST00000505074 KCNQ2O43526 872 aa23.53■■□□□ 1.36
PDLIM7-213ENST00000505074 BARGINQ6ZT62 677 aa23.52■■□□□ 1.36
PDLIM7-213ENST00000505074 ITSN1Q15811 1721 aa23.52■■□□□ 1.36
PDLIM7-213ENST00000505074 WASLO00401 505 aaPredicted RBP23.51■■□□□ 1.35
PDLIM7-213ENST00000505074 EVA1CP58658 441 aa23.51■■□□□ 1.35
PDLIM7-213ENST00000505074 TRAK1Q9UPV9 953 aa23.51■■□□□ 1.35
PDLIM7-213ENST00000505074 ZC3H6P61129 1189 aaKnown RBP23.5■■□□□ 1.35
PDLIM7-213ENST00000505074 ADGRB1O14514 1584 aa23.48■■□□□ 1.35
PDLIM7-213ENST00000505074 SSH2Q76I76 1423 aa23.48■■□□□ 1.35
PDLIM7-213ENST00000505074 ATP7BP35670 1465 aa23.47■■□□□ 1.35
PDLIM7-213ENST00000505074 CAMTA1Q9Y6Y1 1673 aa23.47■■□□□ 1.35
PDLIM7-213ENST00000505074 TCP11L2Q8N4U5 519 aa23.45■■□□□ 1.34
PDLIM7-213ENST00000505074 C11orf95C9JLR9 678 aaPredicted RBP23.43■■□□□ 1.34
PDLIM7-213ENST00000505074 RGPD3A6NKT7 1758 aaPredicted RBP23.42■■□□□ 1.34
PDLIM7-213ENST00000505074 RGPD4Q7Z3J3 1758 aa23.42■■□□□ 1.34
PDLIM7-213ENST00000505074 PARP4Q9UKK3 1724 aaKnown RBP23.42■■□□□ 1.34
PDLIM7-213ENST00000505074 NUTM2GQ5VZR2 741 aa23.42■■□□□ 1.34
PDLIM7-213ENST00000505074 LARP1Q6PKG0 1096 aaKnown RBP23.42■■□□□ 1.34
PDLIM7-213ENST00000505074 THRAP3Q9Y2W1 955 aaKnown RBP23.42■■□□□ 1.34
PDLIM7-213ENST00000505074 NUDT16Q96DE0 195 aaKnown RBP23.4■■□□□ 1.34
PDLIM7-213ENST00000505074 KDM2AQ9Y2K7 1162 aa23.4■■□□□ 1.34
PDLIM7-213ENST00000505074 LMO7Q8WWI1 1683 aa23.39■■□□□ 1.34
PDLIM7-213ENST00000505074 NRKQ7Z2Y5 1582 aa23.39■■□□□ 1.33
PDLIM7-213ENST00000505074 SBF2Q86WG5 1849 aa23.38■■□□□ 1.33
PDLIM7-213ENST00000505074 CASZ1Q86V15 1759 aa23.38■■□□□ 1.33
PDLIM7-213ENST00000505074 DCAF11Q8TEB1 546 aa23.37■■□□□ 1.33
PDLIM7-213ENST00000505074 PLSCR1O15162 318 aa23.36■■□□□ 1.33
PDLIM7-213ENST00000505074 CPDO75976 1380 aa23.36■■□□□ 1.33
PDLIM7-213ENST00000505074 ARHGEF28Q8N1W1 1705 aaKnown RBP23.36■■□□□ 1.33
PDLIM7-213ENST00000505074 OVOS2A0A0G2JMS6 1433 aa23.35■■□□□ 1.33
PDLIM7-213ENST00000505074 OVOS2A0A0J9YW53 1432 aa23.35■■□□□ 1.33
PDLIM7-213ENST00000505074 OVOS2Q6IE36 1432 aa23.35■■□□□ 1.33
PDLIM7-213ENST00000505074 ZNF784Q8NCA9 323 aaPredicted RBP23.35■■□□□ 1.33
PDLIM7-213ENST00000505074 PEAK1Q9H792 1746 aa23.34■■□□□ 1.33
PDLIM7-213ENST00000505074 ABTB2Q8N961 1025 aa23.34■■□□□ 1.33
PDLIM7-213ENST00000505074 TOPAZ1Q8N9V7 1692 aa23.33■■□□□ 1.33
PDLIM7-213ENST00000505074 POLR3AO14802 1390 aaPredicted RBP23.33■■□□□ 1.33
PDLIM7-213ENST00000505074 CHD4Q14839 1912 aa23.33■■□□□ 1.32
PDLIM7-213ENST00000505074 ACEP12821 1306 aa23.33■■□□□ 1.32
PDLIM7-213ENST00000505074 MYOM1P52179 1685 aa23.32■■□□□ 1.32
PDLIM7-213ENST00000505074 ANO8Q9HCE9 1232 aaPredicted RBP23.31■■□□□ 1.32
PDLIM7-213ENST00000505074 COL5A2P05997 1499 aaPredicted RBP23.3■■□□□ 1.32
PDLIM7-213ENST00000505074 CDK19Q9BWU1 502 aa23.3■■□□□ 1.32
PDLIM7-213ENST00000505074 BCL11BQ9C0K0 894 aaPredicted RBP23.3■■□□□ 1.32
PDLIM7-213ENST00000505074 CRB1P82279 1406 aa23.3■■□□□ 1.32
PDLIM7-213ENST00000505074 CCDC61Q9Y6R9 512 aa23.29■■□□□ 1.32
PDLIM7-213ENST00000505074 LRRC37A3O60309 1634 aa23.29■■□□□ 1.32
PDLIM7-213ENST00000505074 USP19O94966 1318 aa23.29■■□□□ 1.32
PDLIM7-213ENST00000505074 SENP3-EIF4A1A0A087X0R7 540 aa23.28■■□□□ 1.32
PDLIM7-213ENST00000505074 ZBTB7AO95365 584 aa23.28■■□□□ 1.32
PDLIM7-213ENST00000505074 NLRP13Q86W25 1043 aa23.28■■□□□ 1.32
PDLIM7-213ENST00000505074 GCP02774 474 aa23.27■■□□□ 1.32
PDLIM7-213ENST00000505074 DDB1Q16531 1140 aa23.27■■□□□ 1.32
PDLIM7-213ENST00000505074 PDGFDQ9GZP0 370 aaPredicted RBP23.27■■□□□ 1.32
PDLIM7-213ENST00000505074 PLEKHG3A1L390 1219 aa23.26■■□□□ 1.31
PDLIM7-213ENST00000505074 STAC3Q96MF2 364 aa23.26■■□□□ 1.31
PDLIM7-213ENST00000505074 AKAP12Q02952 1782 aa23.25■■□□□ 1.31
PDLIM7-213ENST00000505074 PTGER2P43116 358 aa23.25■■□□□ 1.31
PDLIM7-213ENST00000505074 ATF5Q9Y2D1 282 aaPredicted RBP23.24■■□□□ 1.31
PDLIM7-213ENST00000505074 WNK3Q9BYP7 1800 aa23.23■■□□□ 1.31
PDLIM7-213ENST00000505074 ZBTB7CA1YPR0 619 aa23.22■■□□□ 1.31
PDLIM7-213ENST00000505074 C1QTNF8P60827 252 aa23.22■■□□□ 1.31
PDLIM7-213ENST00000505074 PROM2Q8N271 834 aa23.22■■□□□ 1.31
PDLIM7-213ENST00000505074 SYT17Q9BSW7 474 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms