RNA–Protein interactions for RNA: ENST00000504878.1

CCNH-203, Transcript of cyclin H, humanhuman

TSL 1 (best) BASIC

Gene CCNH, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNH-203ENST00000504878 TIMELESSQ9UNS1 1208 aa17.05■□□□□ 0.32
CCNH-203ENST00000504878 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.03■□□□□ 0.32
CCNH-203ENST00000504878 BCL9LQ86UU0 1499 aa17.03■□□□□ 0.32
CCNH-203ENST00000504878 PLCH1Q4KWH8 1693 aa17.03■□□□□ 0.32
CCNH-203ENST00000504878 AKAP12Q02952 1782 aa17.03■□□□□ 0.32
CCNH-203ENST00000504878 PAK3O75914 559 aaPredicted RBP17.02■□□□□ 0.32
CCNH-203ENST00000504878 CCER1Q8TC90 406 aaPredicted RBP17.02■□□□□ 0.32
CCNH-203ENST00000504878 CABP1Q9NZU7 370 aa17.02■□□□□ 0.32
CCNH-203ENST00000504878 SLIT2O94813 1529 aa17.02■□□□□ 0.32
CCNH-203ENST00000504878 PHRF1Q9P1Y6 1649 aaKnown RBP17.02■□□□□ 0.31
CCNH-203ENST00000504878 PLEKHG5O94827 1062 aa17.01■□□□□ 0.31
CCNH-203ENST00000504878 USP21Q9UK80 565 aa17.01■□□□□ 0.31
CCNH-203ENST00000504878 NWD2Q9ULI1 1742 aa17.01■□□□□ 0.31
CCNH-203ENST00000504878 QTRT2Q9H974 415 aaKnown RBP17■□□□□ 0.31
CCNH-203ENST00000504878 ATRNO75882 1429 aa17■□□□□ 0.31
CCNH-203ENST00000504878 USP6P35125 1406 aa17■□□□□ 0.31
CCNH-203ENST00000504878 CDK12Q9NYV4 1490 aaPredicted RBP17■□□□□ 0.31
CCNH-203ENST00000504878 RXRBP28702 533 aa16.99■□□□□ 0.31
CCNH-203ENST00000504878 TESK2Q96S53 571 aa16.99■□□□□ 0.31
CCNH-203ENST00000504878 ATAD2Q6PL18 1390 aa16.99■□□□□ 0.31
CCNH-203ENST00000504878 HAP1P54257 671 aaPredicted RBP16.99■□□□□ 0.31
CCNH-203ENST00000504878 SSH2Q76I76 1423 aa16.98■□□□□ 0.31
CCNH-203ENST00000504878 NRKQ7Z2Y5 1582 aa16.98■□□□□ 0.31
CCNH-203ENST00000504878 ST20-MTHFSA0A0A6YYL1 179 aa16.98■□□□□ 0.31
CCNH-203ENST00000504878 USP47Q96K76 1375 aa16.98■□□□□ 0.31
CCNH-203ENST00000504878 MON2Q7Z3U7 1717 aa16.97■□□□□ 0.31
CCNH-203ENST00000504878 PIK3C2AO00443 1686 aa16.97■□□□□ 0.31
CCNH-203ENST00000504878 BRD4O60885 1362 aaPredicted RBP16.97■□□□□ 0.31
CCNH-203ENST00000504878 RBM6P78332 1123 aaKnown RBP16.97■□□□□ 0.31
CCNH-203ENST00000504878 COL14A1Q05707 1796 aaKnown RBP16.96■□□□□ 0.31
CCNH-203ENST00000504878 NRAPQ86VF7 1730 aa16.96■□□□□ 0.31
CCNH-203ENST00000504878 RGS12O14924 1447 aa16.96■□□□□ 0.31
CCNH-203ENST00000504878 CPSF1Q10570 1443 aaKnown RBP16.96■□□□□ 0.31
CCNH-203ENST00000504878 EP400Q96L91 3159 aa16.96■□□□□ 0.31
CCNH-203ENST00000504878 TRPC5Q9UL62 973 aaPredicted RBP16.96■□□□□ 0.31
CCNH-203ENST00000504878 NUTM2GQ5VZR2 741 aa16.95■□□□□ 0.3
CCNH-203ENST00000504878 CD163L1Q9NR16 1453 aa16.95■□□□□ 0.3
CCNH-203ENST00000504878 FAM83GA6ND36 823 aa16.94■□□□□ 0.3
CCNH-203ENST00000504878 ABTB2Q8N961 1025 aa16.94■□□□□ 0.3
CCNH-203ENST00000504878 USP19O94966 1318 aa16.94■□□□□ 0.3
CCNH-203ENST00000504878 GLI3P10071 1580 aa16.93■□□□□ 0.3
CCNH-203ENST00000504878 UNC5CLQ8IV45 518 aa16.93■□□□□ 0.3
CCNH-203ENST00000504878 PUS7Q96PZ0 661 aaKnown RBP16.92■□□□□ 0.3
CCNH-203ENST00000504878 KIAA0232Q92628 1395 aa16.91■□□□□ 0.3
CCNH-203ENST00000504878 ZNF692Q9BU19 519 aaPredicted RBP16.91■□□□□ 0.3
CCNH-203ENST00000504878 KTN1Q86UP2 1357 aaKnown RBP16.9■□□□□ 0.3
CCNH-203ENST00000504878 SLIT3O75094 1523 aa16.9■□□□□ 0.3
CCNH-203ENST00000504878 GJD4Q96KN9 370 aaPredicted RBP16.9■□□□□ 0.3
CCNH-203ENST00000504878 TTC21BQ7Z4L5 1316 aa16.89■□□□□ 0.29
CCNH-203ENST00000504878 NLRP13Q86W25 1043 aa16.89■□□□□ 0.29
CCNH-203ENST00000504878 SLC12A5Q9H2X9 1139 aa16.89■□□□□ 0.29
CCNH-203ENST00000504878 PRDM11Q9NQV5 511 aa16.89■□□□□ 0.29
CCNH-203ENST00000504878 LMO7Q8WWI1 1683 aa16.88■□□□□ 0.29
CCNH-203ENST00000504878 SLC24A1O60721 1099 aa16.88■□□□□ 0.29
CCNH-203ENST00000504878 VPS72Q15906 364 aa16.88■□□□□ 0.29
CCNH-203ENST00000504878 BTG4Q9NY30 223 aa16.88■□□□□ 0.29
CCNH-203ENST00000504878 USP54Q70EL1 1684 aa16.88■□□□□ 0.29
CCNH-203ENST00000504878 ZC3H6P61129 1189 aaKnown RBP16.87■□□□□ 0.29
CCNH-203ENST00000504878 TMC1Q8TDI8 760 aa16.87■□□□□ 0.29
CCNH-203ENST00000504878 CPDO75976 1380 aa16.87■□□□□ 0.29
CCNH-203ENST00000504878 TTC21AQ8NDW8 1320 aa16.87■□□□□ 0.29
CCNH-203ENST00000504878 GCP02774 474 aa16.86■□□□□ 0.29
CCNH-203ENST00000504878 NLRP6P59044 892 aa16.86■□□□□ 0.29
CCNH-203ENST00000504878 CHRNA2Q15822 529 aa16.86■□□□□ 0.29
CCNH-203ENST00000504878 A0A1W2PP64 1363 aa16.86■□□□□ 0.29
CCNH-203ENST00000504878 NINLQ9Y2I6 1382 aa16.86■□□□□ 0.29
CCNH-203ENST00000504878 BRWD3Q6RI45 1802 aa16.85■□□□□ 0.29
CCNH-203ENST00000504878 TMF1P82094 1093 aa16.85■□□□□ 0.29
CCNH-203ENST00000504878 EDC4Q6P2E9 1401 aaKnown RBP16.85■□□□□ 0.29
CCNH-203ENST00000504878 MYOM1P52179 1685 aa16.84■□□□□ 0.29
CCNH-203ENST00000504878 CAMTA1Q9Y6Y1 1673 aa16.84■□□□□ 0.29
CCNH-203ENST00000504878 COL18A1P39060 1754 aa16.83■□□□□ 0.29
CCNH-203ENST00000504878 NFAT5O94916 1531 aa16.83■□□□□ 0.29
CCNH-203ENST00000504878 HDGFL2Q7Z4V5 671 aaPredicted RBP16.83■□□□□ 0.28
CCNH-203ENST00000504878 TERF2IPQ9NYB0 399 aa16.83■□□□□ 0.28
CCNH-203ENST00000504878 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.82■□□□□ 0.28
CCNH-203ENST00000504878 USP31Q70CQ4 1352 aa16.82■□□□□ 0.28
CCNH-203ENST00000504878 CCDC9Q9Y3X0 531 aaKnown RBP16.81■□□□□ 0.28
CCNH-203ENST00000504878 ONECUT3O60422 494 aaPredicted RBP16.8■□□□□ 0.28
CCNH-203ENST00000504878 NME9Q86XW9 330 aa16.8■□□□□ 0.28
CCNH-203ENST00000504878 ZRANB1Q9UGI0 708 aa16.8■□□□□ 0.28
CCNH-203ENST00000504878 SPATA31A5Q5VU36 1347 aa16.8■□□□□ 0.28
CCNH-203ENST00000504878 SPATA31A7Q8IWB4 1347 aa16.8■□□□□ 0.28
CCNH-203ENST00000504878 ANKRD36BQ8N2N9 1353 aa16.8■□□□□ 0.28
CCNH-203ENST00000504878 UPF1Q92900 1129 aaKnown RBP eCLIP16.8■□□□□ 0.28
CCNH-203ENST00000504878 THSD7AQ9UPZ6 1657 aa16.79■□□□□ 0.28
CCNH-203ENST00000504878 COL5A2P05997 1499 aaPredicted RBP16.79■□□□□ 0.28
CCNH-203ENST00000504878 RGPD5Q99666 1765 aa16.79■□□□□ 0.28
CCNH-203ENST00000504878 AATKQ6ZMQ8 1374 aa16.78■□□□□ 0.28
CCNH-203ENST00000504878 OVOS2A0A0J9YW53 1432 aa16.78■□□□□ 0.28
CCNH-203ENST00000504878 OVOS2Q6IE36 1432 aa16.78■□□□□ 0.28
CCNH-203ENST00000504878 CDCA8Q53HL2 280 aa16.78■□□□□ 0.28
CCNH-203ENST00000504878 STRN4Q9NRL3 753 aa16.78■□□□□ 0.28
CCNH-203ENST00000504878 LTN1O94822 1766 aa16.78■□□□□ 0.28
CCNH-203ENST00000504878 HSPA5P11021 654 aaKnown RBP16.77■□□□□ 0.28
CCNH-203ENST00000504878 EIF4G2P78344 907 aaKnown RBP eCLIP16.77■□□□□ 0.28
CCNH-203ENST00000504878 ARHGEF25Q86VW2 580 aa16.77■□□□□ 0.28
CCNH-203ENST00000504878 SEPT12Q8IYM1 358 aa16.77■□□□□ 0.28
CCNH-203ENST00000504878 KCNH5Q8NCM2 988 aa16.77■□□□□ 0.28
CCNH-203ENST00000504878 SPATA31A1Q5TZJ5 1347 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms