RNA–Protein interactions for RNA: ENST00000504524.5

PLXND1-204, Transcript of plexin D1, humanhuman

TSL 1 (best)

Gene PLXND1, Length 1,701 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-204ENST00000504524 USP54Q70EL1 1684 aa24.54■■□□□ 1.52
PLXND1-204ENST00000504524 NME9Q86XW9 330 aa24.53■■□□□ 1.52
PLXND1-204ENST00000504524 MARF1Q9Y4F3 1742 aaKnown RBP24.53■■□□□ 1.52
PLXND1-204ENST00000504524 PIK3C2AO00443 1686 aa24.52■■□□□ 1.52
PLXND1-204ENST00000504524 SENP3-EIF4A1A0A087X0R7 540 aa24.52■■□□□ 1.52
PLXND1-204ENST00000504524 RBM33Q96EV2 1170 aaKnown RBP24.51■■□□□ 1.51
PLXND1-204ENST00000504524 TTC21BQ7Z4L5 1316 aa24.51■■□□□ 1.51
PLXND1-204ENST00000504524 SMG6Q86US8 1419 aaKnown RBP24.51■■□□□ 1.51
PLXND1-204ENST00000504524 OVOS2A0A0J9YW53 1432 aa24.5■■□□□ 1.51
PLXND1-204ENST00000504524 OVOS2Q6IE36 1432 aa24.5■■□□□ 1.51
PLXND1-204ENST00000504524 XIRP1Q702N8 1843 aaKnown RBP24.5■■□□□ 1.51
PLXND1-204ENST00000504524 ZRANB1Q9UGI0 708 aa24.49■■□□□ 1.51
PLXND1-204ENST00000504524 PMFBP1Q8TBY8 1022 aa24.48■■□□□ 1.51
PLXND1-204ENST00000504524 CFAP53Q96M91 514 aa24.48■■□□□ 1.51
PLXND1-204ENST00000504524 AATKQ6ZMQ8 1374 aa24.47■■□□□ 1.51
PLXND1-204ENST00000504524 PNPLA6Q8IY17 1366 aa24.47■■□□□ 1.51
PLXND1-204ENST00000504524 AEBP2Q6ZN18 517 aaPredicted RBP24.45■■□□□ 1.5
PLXND1-204ENST00000504524 IQSEC2Q5JU85 1478 aa24.44■■□□□ 1.5
PLXND1-204ENST00000504524 CDK12Q9NYV4 1490 aaPredicted RBP24.44■■□□□ 1.5
PLXND1-204ENST00000504524 TTC21AQ8NDW8 1320 aa24.44■■□□□ 1.5
PLXND1-204ENST00000504524 PROSER2Q86WR7 435 aaPredicted RBP24.43■■□□□ 1.5
PLXND1-204ENST00000504524 COG3Q96JB2 828 aa24.43■■□□□ 1.5
PLXND1-204ENST00000504524 LRRC7Q96NW7 1537 aa24.42■■□□□ 1.5
PLXND1-204ENST00000504524 NGDNQ8NEJ9 315 aaKnown RBP24.42■■□□□ 1.5
PLXND1-204ENST00000504524 POLKQ9UBT6 870 aa24.42■■□□□ 1.5
PLXND1-204ENST00000504524 KIF1AQ12756 1690 aa24.42■■□□□ 1.5
PLXND1-204ENST00000504524 PEAK1Q9H792 1746 aa24.41■■□□□ 1.5
PLXND1-204ENST00000504524 CCDC146Q8IYE0 955 aa24.41■■□□□ 1.5
PLXND1-204ENST00000504524 NCOA3Q9Y6Q9 1424 aa24.4■■□□□ 1.5
PLXND1-204ENST00000504524 USP31Q70CQ4 1352 aa24.4■■□□□ 1.5
PLXND1-204ENST00000504524 FBLN1P23142 703 aa24.4■■□□□ 1.5
PLXND1-204ENST00000504524 NUDCQ9Y266 331 aa24.4■■□□□ 1.5
PLXND1-204ENST00000504524 SALL2Q9Y467 1007 aaPredicted RBP24.39■■□□□ 1.5
PLXND1-204ENST00000504524 PHF8Q9UPP1 1060 aa24.38■■□□□ 1.49
PLXND1-204ENST00000504524 TMEM94Q12767 1356 aa24.38■■□□□ 1.49
PLXND1-204ENST00000504524 C14orf37Q86TY3 774 aa24.38■■□□□ 1.49
PLXND1-204ENST00000504524 TRPM3Q9HCF6 1732 aaPredicted RBP24.37■■□□□ 1.49
PLXND1-204ENST00000504524 DCCP43146 1447 aa24.37■■□□□ 1.49
PLXND1-204ENST00000504524 PDE3BQ13370 1112 aa24.37■■□□□ 1.49
PLXND1-204ENST00000504524 ZNF521Q96K83 1311 aa24.37■■□□□ 1.49
PLXND1-204ENST00000504524 EMILIN1Q9Y6C2 1016 aa24.35■■□□□ 1.49
PLXND1-204ENST00000504524 C1orf167Q5SNV9 1468 aa24.34■■□□□ 1.49
PLXND1-204ENST00000504524 APAF1O14727 1248 aa24.33■■□□□ 1.49
PLXND1-204ENST00000504524 C19orf44Q9H6X5 657 aa24.33■■□□□ 1.49
PLXND1-204ENST00000504524 MST1RQ04912 1400 aa24.33■■□□□ 1.49
PLXND1-204ENST00000504524 DIAPH1O60610 1272 aaKnown RBP24.32■■□□□ 1.48
PLXND1-204ENST00000504524 RUNDC1Q96C34 613 aa24.32■■□□□ 1.48
PLXND1-204ENST00000504524 SUPT16HQ9Y5B9 1047 aaKnown RBP24.32■■□□□ 1.48
PLXND1-204ENST00000504524 RGPD1P0DJD0 1748 aa24.31■■□□□ 1.48
PLXND1-204ENST00000504524 U2AF1L5P0DN76 240 aaPredicted RBP24.3■■□□□ 1.48
PLXND1-204ENST00000504524 U2AF1Q01081 240 aaKnown RBP eCLIP24.3■■□□□ 1.48
PLXND1-204ENST00000504524 RRS1Q15050 365 aaKnown RBP24.3■■□□□ 1.48
PLXND1-204ENST00000504524 ESCO1Q5FWF5 840 aa24.3■■□□□ 1.48
PLXND1-204ENST00000504524 CDCA7LQ96GN5 454 aa24.3■■□□□ 1.48
PLXND1-204ENST00000504524 LTN1O94822 1766 aa24.29■■□□□ 1.48
PLXND1-204ENST00000504524 NGEFQ8N5V2 710 aa24.28■■□□□ 1.48
PLXND1-204ENST00000504524 ORAI2Q96SN7 254 aa24.28■■□□□ 1.48
PLXND1-204ENST00000504524 PPM1GO15355 546 aaPredicted RBP24.27■■□□□ 1.48
PLXND1-204ENST00000504524 U2SURPO15042 1029 aaKnown RBP24.27■■□□□ 1.48
PLXND1-204ENST00000504524 ALS2Q96Q42 1657 aa24.26■■□□□ 1.47
PLXND1-204ENST00000504524 PLEKHF1Q96S99 279 aa24.26■■□□□ 1.47
PLXND1-204ENST00000504524 IL13P35225 146 aa24.25■■□□□ 1.47
PLXND1-204ENST00000504524 NFAT5O94916 1531 aa24.24■■□□□ 1.47
PLXND1-204ENST00000504524 TCP11L2Q8N4U5 519 aa24.24■■□□□ 1.47
PLXND1-204ENST00000504524 ZNF335Q9H4Z2 1342 aaPredicted RBP24.23■■□□□ 1.47
PLXND1-204ENST00000504524 PHF23Q9BUL5 403 aaPredicted RBP24.23■■□□□ 1.47
PLXND1-204ENST00000504524 MSH6P52701 1360 aa24.22■■□□□ 1.47
PLXND1-204ENST00000504524 PHRF1Q9P1Y6 1649 aaKnown RBP24.22■■□□□ 1.47
PLXND1-204ENST00000504524 ATF3P18847 181 aa24.21■■□□□ 1.47
PLXND1-204ENST00000504524 NLRP6P59044 892 aa24.21■■□□□ 1.47
PLXND1-204ENST00000504524 FKBP8Q14318 412 aa24.21■■□□□ 1.47
PLXND1-204ENST00000504524 NCBP3Q53F19 620 aaKnown RBP24.21■■□□□ 1.47
PLXND1-204ENST00000504524 DLG5Q8TDM6 1919 aa24.21■■□□□ 1.47
PLXND1-204ENST00000504524 MAP3K19Q56UN5 1328 aa24.21■■□□□ 1.47
PLXND1-204ENST00000504524 RNF123Q5XPI4 1314 aa24.21■■□□□ 1.47
PLXND1-204ENST00000504524 NEFLP07196 543 aa24.21■■□□□ 1.47
PLXND1-204ENST00000504524 ABTB2Q8N961 1025 aa24.21■■□□□ 1.47
PLXND1-204ENST00000504524 SLIT3O75094 1523 aa24.21■■□□□ 1.47
PLXND1-204ENST00000504524 SBNO1A3KN83 1393 aa24.2■■□□□ 1.46
PLXND1-204ENST00000504524 PSME1Q06323 249 aa24.2■■□□□ 1.46
PLXND1-204ENST00000504524 GOLGA2Q08379 1002 aa24.2■■□□□ 1.46
PLXND1-204ENST00000504524 PAK3O75914 559 aaPredicted RBP24.19■■□□□ 1.46
PLXND1-204ENST00000504524 RSPH6AQ9H0K4 717 aa24.19■■□□□ 1.46
PLXND1-204ENST00000504524 NUTM2GQ5VZR2 741 aa24.18■■□□□ 1.46
PLXND1-204ENST00000504524 RRP7AQ9Y3A4 280 aaKnown RBP24.18■■□□□ 1.46
PLXND1-204ENST00000504524 FOXO3O43524 673 aa24.18■■□□□ 1.46
PLXND1-204ENST00000504524 SLFN5Q08AF3 891 aa24.18■■□□□ 1.46
PLXND1-204ENST00000504524 CCDC27Q2M243 656 aa24.18■■□□□ 1.46
PLXND1-204ENST00000504524 DUSP27Q5VZP5 1158 aa24.18■■□□□ 1.46
PLXND1-204ENST00000504524 CADPS2Q86UW7 1296 aa24.18■■□□□ 1.46
PLXND1-204ENST00000504524 WWC1Q8IX03 1113 aa24.18■■□□□ 1.46
PLXND1-204ENST00000504524 TRMT2AQ8IZ69 625 aaKnown RBP24.18■■□□□ 1.46
PLXND1-204ENST00000504524 DMRT2Q9Y5R5 561 aa24.18■■□□□ 1.46
PLXND1-204ENST00000504524 FLT4P35916 1363 aa24.17■■□□□ 1.46
PLXND1-204ENST00000504524 SOX12O15370 315 aa24.17■■□□□ 1.46
PLXND1-204ENST00000504524 FCHSD2O94868 740 aa24.17■■□□□ 1.46
PLXND1-204ENST00000504524 KIF24Q5T7B8 1368 aa24.16■■□□□ 1.46
PLXND1-204ENST00000504524 EIF4A2Q14240 407 aaKnown RBP24.15■■□□□ 1.46
PLXND1-204ENST00000504524 SPINK5Q9NQ38 1064 aaPredicted RBP24.15■■□□□ 1.46
PLXND1-204ENST00000504524 CRYBG1Q9Y4K1 1723 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms