RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 CT47B1P0C2W7 299 aaPredicted RBP19.92■□□□□ 0.78
PCDHA1-203ENST00000504120 MRE11P49959 708 aa19.91■□□□□ 0.78
PCDHA1-203ENST00000504120 WWC1Q8IX03 1113 aa19.91■□□□□ 0.78
PCDHA1-203ENST00000504120 NAIPQ13075 1403 aa19.91■□□□□ 0.78
PCDHA1-203ENST00000504120 HIP1O00291 1037 aa19.91■□□□□ 0.78
PCDHA1-203ENST00000504120 ABTB2Q8N961 1025 aa19.91■□□□□ 0.78
PCDHA1-203ENST00000504120 NBPF8Q3BBV2 869 aa19.89■□□□□ 0.78
PCDHA1-203ENST00000504120 FAM43AQ8N2R8 423 aa19.89■□□□□ 0.78
PCDHA1-203ENST00000504120 RABEP1Q15276 862 aa19.89■□□□□ 0.77
PCDHA1-203ENST00000504120 ERC1Q8IUD2 1116 aa19.89■□□□□ 0.77
PCDHA1-203ENST00000504120 RBM33Q96EV2 1170 aaKnown RBP19.89■□□□□ 0.77
PCDHA1-203ENST00000504120 NAT10Q9H0A0 1025 aaKnown RBP19.89■□□□□ 0.77
PCDHA1-203ENST00000504120 WDR63Q8IWG1 891 aa19.89■□□□□ 0.77
PCDHA1-203ENST00000504120 GNAI2P04899 355 aa19.88■□□□□ 0.77
PCDHA1-203ENST00000504120 ZNF692Q9BU19 519 aaPredicted RBP19.88■□□□□ 0.77
PCDHA1-203ENST00000504120 BRMS1Q9HCU9 246 aa19.88■□□□□ 0.77
PCDHA1-203ENST00000504120 TXNDC2Q86VQ3 553 aa19.88■□□□□ 0.77
PCDHA1-203ENST00000504120 LETM1O95202 739 aaPredicted RBP19.87■□□□□ 0.77
PCDHA1-203ENST00000504120 XBP1P17861 261 aa19.87■□□□□ 0.77
PCDHA1-203ENST00000504120 PNISRQ8TF01 805 aaKnown RBP19.87■□□□□ 0.77
PCDHA1-203ENST00000504120 SLC12A5Q9H2X9 1139 aa19.87■□□□□ 0.77
PCDHA1-203ENST00000504120 NOB1Q9ULX3 412 aaKnown RBP19.87■□□□□ 0.77
PCDHA1-203ENST00000504120 MBD3O95983 291 aa19.87■□□□□ 0.77
PCDHA1-203ENST00000504120 FOSBP53539 338 aa19.87■□□□□ 0.77
PCDHA1-203ENST00000504120 PRM3Q9NNZ6 103 aa19.87■□□□□ 0.77
PCDHA1-203ENST00000504120 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.87■□□□□ 0.77
PCDHA1-203ENST00000504120 SMG6Q86US8 1419 aaKnown RBP19.86■□□□□ 0.77
PCDHA1-203ENST00000504120 SLC52A1Q9NWF4 448 aa19.86■□□□□ 0.77
PCDHA1-203ENST00000504120 PDCP20941 246 aa19.86■□□□□ 0.77
PCDHA1-203ENST00000504120 NASPP49321 788 aaPredicted RBP19.86■□□□□ 0.77
PCDHA1-203ENST00000504120 FBXW7Q969H0 707 aa19.86■□□□□ 0.77
PCDHA1-203ENST00000504120 TBC1D2BQ9UPU7 963 aa19.86■□□□□ 0.77
PCDHA1-203ENST00000504120 CCDC141Q6ZP82 1450 aa19.85■□□□□ 0.77
PCDHA1-203ENST00000504120 NEK4P51957 841 aa19.85■□□□□ 0.77
PCDHA1-203ENST00000504120 DNAJC5BQ9UF47 199 aa19.85■□□□□ 0.77
PCDHA1-203ENST00000504120 CCDC39Q9UFE4 941 aa19.85■□□□□ 0.77
PCDHA1-203ENST00000504120 ERBINQ96RT1 1412 aa19.85■□□□□ 0.77
PCDHA1-203ENST00000504120 OLFM4Q6UX06 510 aa19.85■□□□□ 0.77
PCDHA1-203ENST00000504120 CCT4P50991 539 aaKnown RBP19.84■□□□□ 0.77
PCDHA1-203ENST00000504120 CDK19Q9BWU1 502 aa19.84■□□□□ 0.77
PCDHA1-203ENST00000504120 IFT57Q9NWB7 429 aa19.84■□□□□ 0.77
PCDHA1-203ENST00000504120 TRAK2O60296 914 aa19.84■□□□□ 0.77
PCDHA1-203ENST00000504120 SDF4Q9BRK5 362 aa19.84■□□□□ 0.77
PCDHA1-203ENST00000504120 SART3Q15020 963 aaKnown RBP19.84■□□□□ 0.77
PCDHA1-203ENST00000504120 PTPN23Q9H3S7 1636 aa19.84■□□□□ 0.77
PCDHA1-203ENST00000504120 SETQ01105 290 aaPredicted RBP19.84■□□□□ 0.77
PCDHA1-203ENST00000504120 TSR2Q969E8 191 aaKnown RBP19.84■□□□□ 0.77
PCDHA1-203ENST00000504120 CCDC27Q2M243 656 aa19.83■□□□□ 0.77
PCDHA1-203ENST00000504120 BCAR3O75815 825 aa19.83■□□□□ 0.77
PCDHA1-203ENST00000504120 ESCO1Q5FWF5 840 aa19.83■□□□□ 0.77
PCDHA1-203ENST00000504120 RPGRIP1LQ68CZ1 1315 aa19.83■□□□□ 0.76
PCDHA1-203ENST00000504120 SLC4A2P04920 1241 aa19.82■□□□□ 0.76
PCDHA1-203ENST00000504120 MEX3CQ5U5Q3 659 aaKnown RBP19.82■□□□□ 0.76
PCDHA1-203ENST00000504120 CABP1Q9NZU7 370 aa19.82■□□□□ 0.76
PCDHA1-203ENST00000504120 CAMSAP2Q08AD1 1489 aa19.82■□□□□ 0.76
PCDHA1-203ENST00000504120 PLB1Q6P1J6 1458 aa19.82■□□□□ 0.76
PCDHA1-203ENST00000504120 TEX35Q5T0J7 233 aa19.82■□□□□ 0.76
PCDHA1-203ENST00000504120 KIF14Q15058 1648 aa19.81■□□□□ 0.76
PCDHA1-203ENST00000504120 SULT6B1Q6IMI4 303 aa19.81■□□□□ 0.76
PCDHA1-203ENST00000504120 C1orf115Q9H7X2 142 aa19.81■□□□□ 0.76
PCDHA1-203ENST00000504120 HDGFL1Q5TGJ6 251 aa19.81■□□□□ 0.76
PCDHA1-203ENST00000504120 CCDC43Q96MW1 224 aaKnown RBP19.81■□□□□ 0.76
PCDHA1-203ENST00000504120 FAM13BQ9NYF5 915 aa19.81■□□□□ 0.76
PCDHA1-203ENST00000504120 DNAJC2Q99543 621 aaKnown RBP19.81■□□□□ 0.76
PCDHA1-203ENST00000504120 ARHGEF11O15085 1522 aa19.81■□□□□ 0.76
PCDHA1-203ENST00000504120 KIF6Q6ZMV9 814 aa19.8■□□□□ 0.76
PCDHA1-203ENST00000504120 ARGLU1Q9NWB6 273 aaPredicted RBP19.8■□□□□ 0.76
PCDHA1-203ENST00000504120 ATF7IPQ6VMQ6 1270 aa19.8■□□□□ 0.76
PCDHA1-203ENST00000504120 MNS1Q8NEH6 495 aa19.8■□□□□ 0.76
PCDHA1-203ENST00000504120 AKNAQ7Z591 1439 aa19.8■□□□□ 0.76
PCDHA1-203ENST00000504120 TATP17735 454 aaPredicted RBP19.79■□□□□ 0.76
PCDHA1-203ENST00000504120 ZNF771Q7L3S4 317 aaPredicted RBP19.79■□□□□ 0.76
PCDHA1-203ENST00000504120 ANKRD30BQ9BXX2 1392 aa19.79■□□□□ 0.76
PCDHA1-203ENST00000504120 FYB1O15117 783 aa19.79■□□□□ 0.76
PCDHA1-203ENST00000504120 MVPQ14764 893 aaKnown RBP19.79■□□□□ 0.76
PCDHA1-203ENST00000504120 CAVIN1Q6NZI2 390 aaKnown RBP19.78■□□□□ 0.76
PCDHA1-203ENST00000504120 CWC22Q9HCG8 908 aaKnown RBP19.78■□□□□ 0.76
PCDHA1-203ENST00000504120 THEMISQ8N1K5 641 aaPredicted RBP19.78■□□□□ 0.76
PCDHA1-203ENST00000504120 LRRCC1Q9C099 1032 aa19.78■□□□□ 0.76
PCDHA1-203ENST00000504120 ABCC5O15440 1437 aa19.78■□□□□ 0.76
PCDHA1-203ENST00000504120 ATAD2Q6PL18 1390 aa19.77■□□□□ 0.76
PCDHA1-203ENST00000504120 KINO60870 393 aaKnown RBP19.77■□□□□ 0.76
PCDHA1-203ENST00000504120 RNF214Q8ND24 703 aa19.77■□□□□ 0.75
PCDHA1-203ENST00000504120 BACH2Q9BYV9 841 aa19.77■□□□□ 0.75
PCDHA1-203ENST00000504120 SRCIN1Q9C0H9 1055 aa19.77■□□□□ 0.75
PCDHA1-203ENST00000504120 RTEL1-TNFRSF6BF6WH68 1400 aa19.77■□□□□ 0.75
PCDHA1-203ENST00000504120 PROSER2Q86WR7 435 aaPredicted RBP19.76■□□□□ 0.75
PCDHA1-203ENST00000504120 ZNF428Q96B54 188 aa19.76■□□□□ 0.75
PCDHA1-203ENST00000504120 ZNF396Q96N95 335 aaPredicted RBP19.76■□□□□ 0.75
PCDHA1-203ENST00000504120 PRPF40AO75400 957 aaKnown RBP19.76■□□□□ 0.75
PCDHA1-203ENST00000504120 TSPY26PQ9H489 355 aa19.76■□□□□ 0.75
PCDHA1-203ENST00000504120 CCDC158Q5M9N0 1113 aa19.75■□□□□ 0.75
PCDHA1-203ENST00000504120 ACBD3Q9H3P7 528 aa19.75■□□□□ 0.75
PCDHA1-203ENST00000504120 ZNF608Q9ULD9 1512 aaPredicted RBP19.75■□□□□ 0.75
PCDHA1-203ENST00000504120 THOC2Q8NI27 1593 aaKnown RBP19.74■□□□□ 0.75
PCDHA1-203ENST00000504120 ANKRD1Q15327 319 aa19.74■□□□□ 0.75
PCDHA1-203ENST00000504120 CYP46A1Q9Y6A2 500 aa19.74■□□□□ 0.75
PCDHA1-203ENST00000504120 SLC3A2P08195 630 aaKnown RBP19.74■□□□□ 0.75
PCDHA1-203ENST00000504120 TRIM5Q9C035 493 aa19.74■□□□□ 0.75
PCDHA1-203ENST00000504120 NAP1L1P55209 391 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms