RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 NKTRP30414 1462 aaKnown RBP7.29□□□□□ -1.24
LINC01340-201ENST00000504012 PLXNC1O60486 1568 aa7.29□□□□□ -1.24
LINC01340-201ENST00000504012 FHOD3Q2V2M9 1422 aa7.28□□□□□ -1.24
LINC01340-201ENST00000504012 ZNF608Q9ULD9 1512 aaPredicted RBP7.28□□□□□ -1.24
LINC01340-201ENST00000504012 TRIM6-TRIM34B2RNG4 842 aa7.28□□□□□ -1.24
LINC01340-201ENST00000504012 NBPF20Q3BBV1 942 aa7.28□□□□□ -1.24
LINC01340-201ENST00000504012 MUM1L1Q5H9M0 696 aa7.28□□□□□ -1.24
LINC01340-201ENST00000504012 RPAINQ86UA6 219 aa7.28□□□□□ -1.24
LINC01340-201ENST00000504012 CARD10Q9BWT7 1032 aa7.28□□□□□ -1.24
LINC01340-201ENST00000504012 TRIM34Q9BYJ4 488 aa7.28□□□□□ -1.24
LINC01340-201ENST00000504012 CWC22Q9HCG8 908 aaKnown RBP7.28□□□□□ -1.24
LINC01340-201ENST00000504012 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.28□□□□□ -1.24
LINC01340-201ENST00000504012 KIF16BQ96L93 1317 aa7.27□□□□□ -1.24
LINC01340-201ENST00000504012 ARHGEF12Q9NZN5 1544 aa7.27□□□□□ -1.25
LINC01340-201ENST00000504012 SHROOM2Q13796 1616 aa7.27□□□□□ -1.25
LINC01340-201ENST00000504012 PER1O15534 1290 aaPredicted RBP7.27□□□□□ -1.25
LINC01340-201ENST00000504012 KIF1CO43896 1103 aaKnown RBP7.27□□□□□ -1.25
LINC01340-201ENST00000504012 MBD3O95983 291 aa7.27□□□□□ -1.25
LINC01340-201ENST00000504012 ATXN8OSP0DMR3 200 aa7.27□□□□□ -1.25
LINC01340-201ENST00000504012 GUCY2CP25092 1073 aa7.27□□□□□ -1.25
LINC01340-201ENST00000504012 LMOD3Q0VAK6 560 aa7.27□□□□□ -1.25
LINC01340-201ENST00000504012 SLFNL1Q499Z3 407 aa7.27□□□□□ -1.25
LINC01340-201ENST00000504012 CDCA8Q53HL2 280 aa7.27□□□□□ -1.25
LINC01340-201ENST00000504012 SLC26A8Q96RN1 970 aa7.27□□□□□ -1.25
LINC01340-201ENST00000504012 C1orf115Q9H7X2 142 aa7.27□□□□□ -1.25
LINC01340-201ENST00000504012 SMC4Q9NTJ3 1288 aa7.27□□□□□ -1.25
LINC01340-201ENST00000504012 LMBRD1Q9NUN5 540 aa7.27□□□□□ -1.25
LINC01340-201ENST00000504012 SCAF11Q99590 1463 aaKnown RBP7.26□□□□□ -1.25
LINC01340-201ENST00000504012 SPDYE4A6NLX3 237 aa7.26□□□□□ -1.25
LINC01340-201ENST00000504012 E9PSI1 815 aa7.26□□□□□ -1.25
LINC01340-201ENST00000504012 K7ELQ4 463 aaPredicted RBP7.26□□□□□ -1.25
LINC01340-201ENST00000504012 CYP2E1P05181 493 aaPredicted RBP7.26□□□□□ -1.25
LINC01340-201ENST00000504012 U2AF2P26368 475 aaKnown RBP eCLIP7.26□□□□□ -1.25
LINC01340-201ENST00000504012 CYP2C19P33261 490 aa7.26□□□□□ -1.25
LINC01340-201ENST00000504012 TNNT3P45378 269 aaPredicted RBP7.26□□□□□ -1.25
LINC01340-201ENST00000504012 PRIM1P49642 420 aaKnown RBP7.26□□□□□ -1.25
LINC01340-201ENST00000504012 ICE2Q659A1 982 aa7.26□□□□□ -1.25
LINC01340-201ENST00000504012 CERS3Q8IU89 383 aa7.26□□□□□ -1.25
LINC01340-201ENST00000504012 OSCARQ8IYS5 282 aa7.26□□□□□ -1.25
LINC01340-201ENST00000504012 FAM177A1Q8N128 213 aaPredicted RBP7.26□□□□□ -1.25
LINC01340-201ENST00000504012 MNS1Q8NEH6 495 aa7.26□□□□□ -1.25
LINC01340-201ENST00000504012 AKT1S1Q96B36 256 aa7.26□□□□□ -1.25
LINC01340-201ENST00000504012 SLC52A1Q9NWF4 448 aa7.26□□□□□ -1.25
LINC01340-201ENST00000504012 PDZRN3Q9UPQ7 1066 aa7.26□□□□□ -1.25
LINC01340-201ENST00000504012 ZBTB12Q9Y330 459 aaPredicted RBP7.26□□□□□ -1.25
LINC01340-201ENST00000504012 SUPT6HQ7KZ85 1726 aaKnown RBP7.26□□□□□ -1.25
LINC01340-201ENST00000504012 IGF1RP08069 1367 aa7.25□□□□□ -1.25
LINC01340-201ENST00000504012 GOLGA6L6A8MZA4 724 aa7.25□□□□□ -1.25
LINC01340-201ENST00000504012 GTF2A1P52655 376 aaPredicted RBP7.25□□□□□ -1.25
LINC01340-201ENST00000504012 RNF20Q5VTR2 975 aa7.25□□□□□ -1.25
LINC01340-201ENST00000504012 KIF18AQ8NI77 898 aa7.25□□□□□ -1.25
LINC01340-201ENST00000504012 SYAP1Q96A49 352 aaPredicted RBP7.25□□□□□ -1.25
LINC01340-201ENST00000504012 RASSF4Q9H2L5 321 aa7.25□□□□□ -1.25
LINC01340-201ENST00000504012 MTMR7Q9Y216 660 aa7.25□□□□□ -1.25
LINC01340-201ENST00000504012 CEP83Q9Y592 693 aa7.25□□□□□ -1.25
LINC01340-201ENST00000504012 PAXBP1Q9Y5B6 917 aa7.25□□□□□ -1.25
LINC01340-201ENST00000504012 EHBP1L1Q8N3D4 1523 aa7.25□□□□□ -1.25
LINC01340-201ENST00000504012 ABCC2Q92887 1545 aa7.25□□□□□ -1.25
LINC01340-201ENST00000504012 UGGT2Q9NYU1 1516 aa7.24□□□□□ -1.25
LINC01340-201ENST00000504012 SMTNL1A8MU46 457 aa7.24□□□□□ -1.25
LINC01340-201ENST00000504012 SATB1Q01826 763 aa7.24□□□□□ -1.25
LINC01340-201ENST00000504012 HSP90AB3PQ58FF7 597 aa7.24□□□□□ -1.25
LINC01340-201ENST00000504012 CAVIN1Q6NZI2 390 aaKnown RBP7.24□□□□□ -1.25
LINC01340-201ENST00000504012 KIAA1524Q8TCG1 905 aa7.24□□□□□ -1.25
LINC01340-201ENST00000504012 TRAIPQ9BWF2 469 aa7.24□□□□□ -1.25
LINC01340-201ENST00000504012 RBM28Q9NW13 759 aaKnown RBP7.24□□□□□ -1.25
LINC01340-201ENST00000504012 USP25Q9UHP3 1055 aa7.24□□□□□ -1.25
LINC01340-201ENST00000504012 KCNG1Q9UIX4 513 aa7.24□□□□□ -1.25
LINC01340-201ENST00000504012 KIF21AQ7Z4S6 1674 aa7.23□□□□□ -1.25
LINC01340-201ENST00000504012 RIOK3O14730 519 aaKnown RBP7.23□□□□□ -1.25
LINC01340-201ENST00000504012 DHX16O60231 1041 aaKnown RBP7.23□□□□□ -1.25
LINC01340-201ENST00000504012 CCDC172P0C7W6 258 aa7.23□□□□□ -1.25
LINC01340-201ENST00000504012 NCBP1Q09161 790 aaKnown RBP7.23□□□□□ -1.25
LINC01340-201ENST00000504012 HDAC1Q13547 482 aaPredicted RBP7.23□□□□□ -1.25
LINC01340-201ENST00000504012 TMCO4Q5TGY1 634 aa7.23□□□□□ -1.25
LINC01340-201ENST00000504012 CNPY4Q8N129 248 aa7.23□□□□□ -1.25
LINC01340-201ENST00000504012 TXLNBQ8N3L3 684 aa7.23□□□□□ -1.25
LINC01340-201ENST00000504012 BANK1Q8NDB2 785 aa7.23□□□□□ -1.25
LINC01340-201ENST00000504012 ZNF397Q8NF99 534 aaPredicted RBP7.23□□□□□ -1.25
LINC01340-201ENST00000504012 KIF1BPQ96EK5 621 aa7.23□□□□□ -1.25
LINC01340-201ENST00000504012 TSPY26PQ9H489 355 aa7.23□□□□□ -1.25
LINC01340-201ENST00000504012 DONSONQ9NYP3 566 aa7.23□□□□□ -1.25
LINC01340-201ENST00000504012 RAI14Q9P0K7 980 aa7.23□□□□□ -1.25
LINC01340-201ENST00000504012 REREQ9P2R6 1566 aa7.22□□□□□ -1.25
LINC01340-201ENST00000504012 SSFA2P28290 1259 aa7.22□□□□□ -1.25
LINC01340-201ENST00000504012 CASQ1P31415 396 aa7.22□□□□□ -1.25
LINC01340-201ENST00000504012 HNRNPH2P55795 449 aaKnown RBP7.22□□□□□ -1.25
LINC01340-201ENST00000504012 SWT1Q5T5J6 900 aaKnown RBP7.22□□□□□ -1.25
LINC01340-201ENST00000504012 WWC1Q8IX03 1113 aa7.22□□□□□ -1.25
LINC01340-201ENST00000504012 REM2Q8IYK8 340 aaPredicted RBP7.22□□□□□ -1.25
LINC01340-201ENST00000504012 GOLGA6L1Q8N7Z2 621 aa7.22□□□□□ -1.25
LINC01340-201ENST00000504012 CWC15Q9P013 229 aaKnown RBP7.22□□□□□ -1.25
LINC01340-201ENST00000504012 CARMIL1Q5VZK9 1371 aa7.21□□□□□ -1.25
LINC01340-201ENST00000504012 LOC102724159A0A0B4J2E5 919 aa7.21□□□□□ -1.26
LINC01340-201ENST00000504012 ATP8B1O43520 1251 aa7.21□□□□□ -1.26
LINC01340-201ENST00000504012 TRDNQ13061 729 aa7.21□□□□□ -1.26
LINC01340-201ENST00000504012 BMS1Q14692 1282 aaKnown RBP7.21□□□□□ -1.26
LINC01340-201ENST00000504012 PWP2Q15269 919 aaKnown RBP7.21□□□□□ -1.26
LINC01340-201ENST00000504012 RABEP1Q15276 862 aa7.21□□□□□ -1.26
LINC01340-201ENST00000504012 NEUROD2Q15784 382 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms