RNA–Protein interactions for RNA: ENST00000499125.3

HMGN1P12-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 12, humanhuman

BASIC

Gene HMGN1P12, Length 195 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P12-201ENST00000499125 BMP1P13497 986 aa8.28□□□□□ -1.08
HMGN1P12-201ENST00000499125 RIC3Q7Z5B4 369 aa8.28□□□□□ -1.08
HMGN1P12-201ENST00000499125 ZBTB3Q9H5J0 574 aa8.28□□□□□ -1.08
HMGN1P12-201ENST00000499125 TLL2Q9Y6L7 1015 aa8.28□□□□□ -1.08
HMGN1P12-201ENST00000499125 CFAP99D6REC4 459 aa8.27□□□□□ -1.09
HMGN1P12-201ENST00000499125 HRCP23327 699 aa8.27□□□□□ -1.09
HMGN1P12-201ENST00000499125 TRIM46Q7Z4K8 759 aa8.27□□□□□ -1.09
HMGN1P12-201ENST00000499125 INSM1Q01101 510 aaPredicted RBP8.26□□□□□ -1.09
HMGN1P12-201ENST00000499125 CSPP1Q1MSJ5 1256 aa8.26□□□□□ -1.09
HMGN1P12-201ENST00000499125 WIPF1O43516 503 aa8.25□□□□□ -1.09
HMGN1P12-201ENST00000499125 PRPF38BQ5VTL8 546 aaKnown RBP8.25□□□□□ -1.09
HMGN1P12-201ENST00000499125 MPNDQ8N594 471 aa8.25□□□□□ -1.09
HMGN1P12-201ENST00000499125 FAM174AQ8TBP5 190 aa8.25□□□□□ -1.09
HMGN1P12-201ENST00000499125 SLC16A10Q8TF71 515 aa8.25□□□□□ -1.09
HMGN1P12-201ENST00000499125 NNTQ13423 1086 aa8.24□□□□□ -1.09
HMGN1P12-201ENST00000499125 CABLES1Q8TDN4 633 aa8.24□□□□□ -1.09
HMGN1P12-201ENST00000499125 NXF1Q9UBU9 619 aaKnown RBP8.24□□□□□ -1.09
HMGN1P12-201ENST00000499125 NUTM2BA6NNL0 878 aaPredicted RBP8.23□□□□□ -1.09
HMGN1P12-201ENST00000499125 NUTM2EB1AL46 878 aaPredicted RBP8.23□□□□□ -1.09
HMGN1P12-201ENST00000499125 NUTM2DQ5VT03 806 aaPredicted RBP8.23□□□□□ -1.09
HMGN1P12-201ENST00000499125 NUTM2AQ8IVF1 878 aaPredicted RBP8.23□□□□□ -1.09
HMGN1P12-201ENST00000499125 TSC1Q92574 1164 aa8.23□□□□□ -1.09
HMGN1P12-201ENST00000499125 MAP10Q9P2G4 905 aa8.23□□□□□ -1.09
HMGN1P12-201ENST00000499125 PDE4DQ08499 809 aa8.22□□□□□ -1.09
HMGN1P12-201ENST00000499125 ARID5BQ14865 1188 aa8.22□□□□□ -1.09
HMGN1P12-201ENST00000499125 AGERQ15109 404 aa8.22□□□□□ -1.09
HMGN1P12-201ENST00000499125 FOXJ1Q92949 421 aa8.22□□□□□ -1.09
HMGN1P12-201ENST00000499125 ZFP42Q96MM3 310 aa8.22□□□□□ -1.09
HMGN1P12-201ENST00000499125 STK17AQ9UEE5 414 aa8.22□□□□□ -1.09
HMGN1P12-201ENST00000499125 F12P00748 615 aaPredicted RBP8.21□□□□□ -1.1
HMGN1P12-201ENST00000499125 WDR4P57081 412 aaKnown RBP8.21□□□□□ -1.1
HMGN1P12-201ENST00000499125 LCE2CQ5TA81 110 aa8.21□□□□□ -1.1
HMGN1P12-201ENST00000499125 PER1O15534 1290 aaPredicted RBP8.2□□□□□ -1.1
HMGN1P12-201ENST00000499125 ADH1CP00326 375 aa8.2□□□□□ -1.1
HMGN1P12-201ENST00000499125 SCARF1Q14162 830 aa8.2□□□□□ -1.1
HMGN1P12-201ENST00000499125 MYSM1Q5VVJ2 828 aa8.2□□□□□ -1.1
HMGN1P12-201ENST00000499125 LIMD1Q9UGP4 676 aa8.2□□□□□ -1.1
HMGN1P12-201ENST00000499125 MRPL14Q6P1L8 145 aaKnown RBP8.19□□□□□ -1.1
HMGN1P12-201ENST00000499125 CDK15Q96Q40 435 aa8.19□□□□□ -1.1
HMGN1P12-201ENST00000499125 TIMP2P16035 220 aa8.18□□□□□ -1.1
HMGN1P12-201ENST00000499125 QPCTQ16769 361 aa8.18□□□□□ -1.1
HMGN1P12-201ENST00000499125 BPHLQ86WA6 291 aaPredicted RBP8.18□□□□□ -1.1
HMGN1P12-201ENST00000499125 NPAS3Q8IXF0 933 aa8.18□□□□□ -1.1
HMGN1P12-201ENST00000499125 SLC24A3Q9HC58 644 aa8.18□□□□□ -1.1
HMGN1P12-201ENST00000499125 LILRB3O75022 631 aa8.17□□□□□ -1.1
HMGN1P12-201ENST00000499125 VEGFBP49765 207 aa8.17□□□□□ -1.1
HMGN1P12-201ENST00000499125 TUSC1Q2TAM9 212 aa8.17□□□□□ -1.1
HMGN1P12-201ENST00000499125 ARMC2Q8NEN0 867 aa8.17□□□□□ -1.1
HMGN1P12-201ENST00000499125 IRF7Q92985 503 aa8.17□□□□□ -1.1
HMGN1P12-201ENST00000499125 PURBQ96QR8 312 aaKnown RBP8.17□□□□□ -1.1
HMGN1P12-201ENST00000499125 NR5A1Q13285 461 aa8.16□□□□□ -1.1
HMGN1P12-201ENST00000499125 HELBQ8NG08 1087 aaPredicted RBP8.16□□□□□ -1.1
HMGN1P12-201ENST00000499125 KLF16Q9BXK1 252 aaPredicted RBP8.16□□□□□ -1.1
HMGN1P12-201ENST00000499125 ZIC2O95409 532 aaPredicted RBP8.15□□□□□ -1.1
HMGN1P12-201ENST00000499125 C4orf48Q5BLP8 95 aa8.15□□□□□ -1.1
HMGN1P12-201ENST00000499125 RSPH6AQ9H0K4 717 aa8.15□□□□□ -1.1
HMGN1P12-201ENST00000499125 GMPRP36959 345 aa8.14□□□□□ -1.11
HMGN1P12-201ENST00000499125 GRM5P41594 1212 aa8.14□□□□□ -1.11
HMGN1P12-201ENST00000499125 CLK2P49760 499 aaKnown RBP8.14□□□□□ -1.11
HMGN1P12-201ENST00000499125 RTL5Q5HYW3 569 aaPredicted RBP8.14□□□□□ -1.11
HMGN1P12-201ENST00000499125 ITPKCQ96DU7 683 aa8.14□□□□□ -1.11
HMGN1P12-201ENST00000499125 ZFAND3Q9H8U3 227 aa8.14□□□□□ -1.11
HMGN1P12-201ENST00000499125 POLR3EQ9NVU0 708 aa8.14□□□□□ -1.11
HMGN1P12-201ENST00000499125 H3BM21 787 aa8.13□□□□□ -1.11
HMGN1P12-201ENST00000499125 NR3C2P08235 984 aa8.13□□□□□ -1.11
HMGN1P12-201ENST00000499125 NBPF14Q5TI25 921 aa8.13□□□□□ -1.11
HMGN1P12-201ENST00000499125 SOBPA7XYQ1 873 aa8.12□□□□□ -1.11
HMGN1P12-201ENST00000499125 C6orf118Q5T5N4 469 aa8.12□□□□□ -1.11
HMGN1P12-201ENST00000499125 MAGEB6P1A0A0J9YX57 407 aa8.11□□□□□ -1.11
HMGN1P12-201ENST00000499125 FAM181BA6NEQ2 426 aa8.11□□□□□ -1.11
HMGN1P12-201ENST00000499125 UPP2O95045 317 aa8.11□□□□□ -1.11
HMGN1P12-201ENST00000499125 MAN1A2O60476 641 aa8.1□□□□□ -1.11
HMGN1P12-201ENST00000499125 VASH1Q7L8A9 365 aaPredicted RBP8.1□□□□□ -1.11
HMGN1P12-201ENST00000499125 SH3RF1Q7Z6J0 888 aa8.1□□□□□ -1.11
HMGN1P12-201ENST00000499125 ERBB4Q15303 1308 aa8.09□□□□□ -1.11
HMGN1P12-201ENST00000499125 BMP2P12643 396 aa8.09□□□□□ -1.11
HMGN1P12-201ENST00000499125 FSHRP23945 695 aa8.09□□□□□ -1.11
HMGN1P12-201ENST00000499125 ZSCAN1Q8NBB4 408 aa8.09□□□□□ -1.11
HMGN1P12-201ENST00000499125 C1QTNF2Q9BXJ5 285 aa8.09□□□□□ -1.11
HMGN1P12-201ENST00000499125 CTDSPL2Q05D32 466 aa8.08□□□□□ -1.12
HMGN1P12-201ENST00000499125 SH3BP5LQ7L8J4 393 aa8.08□□□□□ -1.12
HMGN1P12-201ENST00000499125 CARD14Q9BXL6 1004 aa8.08□□□□□ -1.12
HMGN1P12-201ENST00000499125 ATP1B4Q9UN42 357 aaPredicted RBP8.08□□□□□ -1.12
HMGN1P12-201ENST00000499125 MAP4K5Q9Y4K4 846 aa8.08□□□□□ -1.12
HMGN1P12-201ENST00000499125 TRMT44Q8IYL2 757 aaKnown RBP8.07□□□□□ -1.12
HMGN1P12-201ENST00000499125 LINC00528Q8N1L1 170 aa8.07□□□□□ -1.12
HMGN1P12-201ENST00000499125 GPKOWQ92917 476 aaPredicted RBP eCLIP8.07□□□□□ -1.12
HMGN1P12-201ENST00000499125 MEIOBQ8N635 442 aa8.06□□□□□ -1.12
HMGN1P12-201ENST00000499125 EMILIN1Q9Y6C2 1016 aa8.06□□□□□ -1.12
HMGN1P12-201ENST00000499125 CCDC116Q8IYX3 515 aa8.05□□□□□ -1.12
HMGN1P12-201ENST00000499125 TSEN34Q9BSV6 310 aaKnown RBP8.05□□□□□ -1.12
HMGN1P12-201ENST00000499125 ERFEQ4G0M1 354 aa8.04□□□□□ -1.12
HMGN1P12-201ENST00000499125 LORP23490 312 aaPredicted RBP8.03□□□□□ -1.12
HMGN1P12-201ENST00000499125 SKIV2LQ15477 1246 aaKnown RBP8.03□□□□□ -1.12
HMGN1P12-201ENST00000499125 PDXDC2PQ6P474 469 aa8.03□□□□□ -1.12
HMGN1P12-201ENST00000499125 LRRN4Q8WUT4 740 aa8.03□□□□□ -1.12
HMGN1P12-201ENST00000499125 ARHGAP9Q9BRR9 750 aa8.03□□□□□ -1.12
HMGN1P12-201ENST00000499125 VSIG8P0DPA2 414 aa8.02□□□□□ -1.13
HMGN1P12-201ENST00000499125 ZBTB33Q86T24 672 aa8.02□□□□□ -1.13
HMGN1P12-201ENST00000499125 PGPEP1Q9NXJ5 209 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms