RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 PPP2R2DQ66LE6 453 aa6.29□□□□□ -1.4
RIF1-212ENST00000498041 CRIPAKQ8N1N5 446 aa6.29□□□□□ -1.4
RIF1-212ENST00000498041 CFAP99D6REC4 459 aa6.28□□□□□ -1.4
RIF1-212ENST00000498041 DXOO77932 396 aaKnown RBP6.28□□□□□ -1.4
RIF1-212ENST00000498041 SMPD1P17405 629 aa6.28□□□□□ -1.4
RIF1-212ENST00000498041 JUNDP17535 347 aa6.28□□□□□ -1.4
RIF1-212ENST00000498041 MMP16P51512 607 aa6.28□□□□□ -1.4
RIF1-212ENST00000498041 TRIM32Q13049 653 aa6.28□□□□□ -1.4
RIF1-212ENST00000498041 DESI1Q6ICB0 168 aa6.28□□□□□ -1.4
RIF1-212ENST00000498041 MRGPRX2Q96LB1 330 aa6.28□□□□□ -1.4
RIF1-212ENST00000498041 ATP13A2Q9NQ11 1180 aa6.28□□□□□ -1.4
RIF1-212ENST00000498041 NFX1Q12986 1120 aaKnown RBP6.27□□□□□ -1.41
RIF1-212ENST00000498041 SNIP1Q8TAD8 396 aaKnown RBP6.27□□□□□ -1.41
RIF1-212ENST00000498041 HPS1Q92902 700 aa6.27□□□□□ -1.41
RIF1-212ENST00000498041 WNT7AO00755 349 aa6.26□□□□□ -1.41
RIF1-212ENST00000498041 RFC5P40937 340 aa6.26□□□□□ -1.41
RIF1-212ENST00000498041 FBXO31Q5XUX0 539 aaPredicted RBP6.26□□□□□ -1.41
RIF1-212ENST00000498041 HELBQ8NG08 1087 aaPredicted RBP6.26□□□□□ -1.41
RIF1-212ENST00000498041 TSC1Q92574 1164 aa6.26□□□□□ -1.41
RIF1-212ENST00000498041 TERTO14746 1132 aaKnown RBP6.24□□□□□ -1.41
RIF1-212ENST00000498041 SMCPP49901 116 aaPredicted RBP6.24□□□□□ -1.41
RIF1-212ENST00000498041 INSM1Q01101 510 aaPredicted RBP6.24□□□□□ -1.41
RIF1-212ENST00000498041 PTPRNQ16849 979 aa6.24□□□□□ -1.41
RIF1-212ENST00000498041 TMEM259Q4ZIN3 620 aa6.24□□□□□ -1.41
RIF1-212ENST00000498041 LYPD8Q6UX82 237 aa6.24□□□□□ -1.41
RIF1-212ENST00000498041 STK17AQ9UEE5 414 aa6.24□□□□□ -1.41
RIF1-212ENST00000498041 AP1G2O75843 785 aa6.23□□□□□ -1.41
RIF1-212ENST00000498041 ALDH1A1P00352 501 aa6.23□□□□□ -1.41
RIF1-212ENST00000498041 CCNYL3P0C7X3 344 aa6.23□□□□□ -1.41
RIF1-212ENST00000498041 RC3H1Q5TC82 1133 aaKnown RBP6.23□□□□□ -1.41
RIF1-212ENST00000498041 NUDT12Q9BQG2 462 aa6.23□□□□□ -1.41
RIF1-212ENST00000498041 SENP2Q9HC62 589 aa6.23□□□□□ -1.41
RIF1-212ENST00000498041 CTDSPL2Q05D32 466 aa6.22□□□□□ -1.41
RIF1-212ENST00000498041 TRIM47Q96LD4 638 aa6.22□□□□□ -1.41
RIF1-212ENST00000498041 PER1O15534 1290 aaPredicted RBP6.21□□□□□ -1.42
RIF1-212ENST00000498041 VEGFBP49765 207 aa6.21□□□□□ -1.42
RIF1-212ENST00000498041 BANK1Q8NDB2 785 aa6.21□□□□□ -1.42
RIF1-212ENST00000498041 EVA1BQ9NVM1 165 aa6.21□□□□□ -1.42
RIF1-212ENST00000498041 USP17L8P0C7I0 530 aa6.2□□□□□ -1.42
RIF1-212ENST00000498041 BMP1P13497 986 aa6.2□□□□□ -1.42
RIF1-212ENST00000498041 SKOR1P84550 965 aa6.2□□□□□ -1.42
RIF1-212ENST00000498041 KCNH2Q12809 1159 aa6.2□□□□□ -1.42
RIF1-212ENST00000498041 LCE2CQ5TA81 110 aa6.2□□□□□ -1.42
RIF1-212ENST00000498041 WIPF1O43516 503 aa6.19□□□□□ -1.42
RIF1-212ENST00000498041 F12P00748 615 aaPredicted RBP6.19□□□□□ -1.42
RIF1-212ENST00000498041 CTHP32929 405 aa6.19□□□□□ -1.42
RIF1-212ENST00000498041 PTCRAQ6ISU1 281 aaPredicted RBP6.18□□□□□ -1.42
RIF1-212ENST00000498041 EHBP1Q8NDI1 1231 aa6.18□□□□□ -1.42
RIF1-212ENST00000498041 SLC16A10Q8TF71 515 aa6.18□□□□□ -1.42
RIF1-212ENST00000498041 LRRN4Q8WUT4 740 aa6.18□□□□□ -1.42
RIF1-212ENST00000498041 KIFC2Q96AC6 838 aa6.18□□□□□ -1.42
RIF1-212ENST00000498041 WASF2Q9Y6W5 498 aa6.18□□□□□ -1.42
RIF1-212ENST00000498041 MAP10Q9P2G4 905 aa6.17□□□□□ -1.42
RIF1-212ENST00000498041 CAPN5O15484 640 aaPredicted RBP6.16□□□□□ -1.42
RIF1-212ENST00000498041 UNC93B1Q9H1C4 597 aa6.16□□□□□ -1.42
RIF1-212ENST00000498041 SOCS7O14512 581 aa6.15□□□□□ -1.42
RIF1-212ENST00000498041 GMPRP36959 345 aa6.15□□□□□ -1.42
RIF1-212ENST00000498041 LINC01559Q495D7 138 aa6.15□□□□□ -1.42
RIF1-212ENST00000498041 ARMC2Q8NEN0 867 aa6.15□□□□□ -1.42
RIF1-212ENST00000498041 HMX1Q9NP08 348 aaPredicted RBP6.15□□□□□ -1.42
RIF1-212ENST00000498041 SNRKQ9NRH2 765 aa6.15□□□□□ -1.42
RIF1-212ENST00000498041 APBB1O00213 710 aa6.14□□□□□ -1.43
RIF1-212ENST00000498041 WNT7BP56706 349 aa6.14□□□□□ -1.43
RIF1-212ENST00000498041 NR6A1Q15406 480 aa6.14□□□□□ -1.43
RIF1-212ENST00000498041 PNMA1Q8ND90 353 aa6.14□□□□□ -1.43
RIF1-212ENST00000498041 NXF1Q9UBU9 619 aaKnown RBP6.14□□□□□ -1.43
RIF1-212ENST00000498041 FLIIQ13045 1269 aa6.13□□□□□ -1.43
RIF1-212ENST00000498041 TRIM46Q7Z4K8 759 aa6.13□□□□□ -1.43
RIF1-212ENST00000498041 MTMR14Q8NCE2 650 aa6.13□□□□□ -1.43
RIF1-212ENST00000498041 BAP1Q92560 729 aa6.13□□□□□ -1.43
RIF1-212ENST00000498041 TRIM34Q9BYJ4 488 aa6.13□□□□□ -1.43
RIF1-212ENST00000498041 FAM181BA6NEQ2 426 aa6.12□□□□□ -1.43
RIF1-212ENST00000498041 NBPF14Q5TI25 921 aa6.12□□□□□ -1.43
RIF1-212ENST00000498041 EPS8L1Q8TE68 723 aa6.12□□□□□ -1.43
RIF1-212ENST00000498041 GPKOWQ92917 476 aaPredicted RBP eCLIP6.12□□□□□ -1.43
RIF1-212ENST00000498041 GJD4Q96KN9 370 aaPredicted RBP6.12□□□□□ -1.43
RIF1-212ENST00000498041 FKBPLQ9UIM3 349 aa6.12□□□□□ -1.43
RIF1-212ENST00000498041 TLL2Q9Y6L7 1015 aa6.12□□□□□ -1.43
RIF1-212ENST00000498041 ZC3H4Q9UPT8 1303 aaKnown RBP6.11□□□□□ -1.43
RIF1-212ENST00000498041 SOBPA7XYQ1 873 aa6.11□□□□□ -1.43
RIF1-212ENST00000498041 SH3BP2P78314 561 aa6.11□□□□□ -1.43
RIF1-212ENST00000498041 MCM6Q14566 821 aa6.11□□□□□ -1.43
RIF1-212ENST00000498041 ZNF511Q8NB15 262 aa6.11□□□□□ -1.43
RIF1-212ENST00000498041 ZSCAN1Q8NBB4 408 aa6.11□□□□□ -1.43
RIF1-212ENST00000498041 IRF7Q92985 503 aa6.11□□□□□ -1.43
RIF1-212ENST00000498041 PRM3Q9NNZ6 103 aa6.11□□□□□ -1.43
RIF1-212ENST00000498041 ZFP42Q96MM3 310 aa6.1□□□□□ -1.43
RIF1-212ENST00000498041 NDUFB9Q9Y6M9 179 aa6.1□□□□□ -1.43
RIF1-212ENST00000498041 SIAH2O43255 324 aa6.09□□□□□ -1.43
RIF1-212ENST00000498041 PDXDC2PQ6P474 469 aa6.09□□□□□ -1.43
RIF1-212ENST00000498041 GTF3C3Q9Y5Q9 886 aa6.09□□□□□ -1.43
RIF1-212ENST00000498041 ERBB4Q15303 1308 aa6.08□□□□□ -1.44
RIF1-212ENST00000498041 AGERQ15109 404 aa6.08□□□□□ -1.44
RIF1-212ENST00000498041 BPHLQ86WA6 291 aaPredicted RBP6.08□□□□□ -1.44
RIF1-212ENST00000498041 FOXJ1Q92949 421 aa6.08□□□□□ -1.44
RIF1-212ENST00000498041 PURBQ96QR8 312 aaKnown RBP6.08□□□□□ -1.44
RIF1-212ENST00000498041 VARSP26640 1264 aaKnown RBP6.07□□□□□ -1.44
RIF1-212ENST00000498041 PTK2Q05397 1052 aa6.07□□□□□ -1.44
RIF1-212ENST00000498041 NNTQ13423 1086 aa6.07□□□□□ -1.44
RIF1-212ENST00000498041 ARID5BQ14865 1188 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 289 ms