RNA–Protein interactions for RNA: ENST00000497107.1

ITGA6-211, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-211ENST00000497107 SPSB2Q99619 263 aa9.46□□□□□ -0.9
ITGA6-211ENST00000497107 PKD2L1Q9P0L9 805 aa9.46□□□□□ -0.9
ITGA6-211ENST00000497107 DACH1Q9UI36 760 aa9.46□□□□□ -0.9
ITGA6-211ENST00000497107 MOXD2PA6NHM9 499 aa9.45□□□□□ -0.9
ITGA6-211ENST00000497107 BRICD5Q6PL45 260 aa9.45□□□□□ -0.9
ITGA6-211ENST00000497107 FAM117AQ9C073 453 aa9.45□□□□□ -0.9
ITGA6-211ENST00000497107 CARMIL1Q5VZK9 1371 aa9.45□□□□□ -0.9
ITGA6-211ENST00000497107 ABCA10Q8WWZ4 1543 aa9.45□□□□□ -0.9
ITGA6-211ENST00000497107 WFS1O76024 890 aa9.44□□□□□ -0.9
ITGA6-211ENST00000497107 RSBN1LQ6PCB5 846 aaPredicted RBP9.44□□□□□ -0.9
ITGA6-211ENST00000497107 HLA-CQ95604 372 aa9.44□□□□□ -0.9
ITGA6-211ENST00000497107 STK17AQ9UEE5 414 aa9.44□□□□□ -0.9
ITGA6-211ENST00000497107 POLA1P09884 1462 aaPredicted RBP9.44□□□□□ -0.9
ITGA6-211ENST00000497107 SPTLC1O15269 473 aa9.43□□□□□ -0.9
ITGA6-211ENST00000497107 WIPF1O43516 503 aa9.43□□□□□ -0.9
ITGA6-211ENST00000497107 RANGAP1P46060 587 aaPredicted RBP9.43□□□□□ -0.9
ITGA6-211ENST00000497107 MYSM1Q5VVJ2 828 aa9.43□□□□□ -0.9
ITGA6-211ENST00000497107 RNF19BQ6ZMZ0 732 aa9.43□□□□□ -0.9
ITGA6-211ENST00000497107 SLC6A16Q9GZN6 736 aa9.43□□□□□ -0.9
ITGA6-211ENST00000497107 URB2Q14146 1524 aaKnown RBP9.42□□□□□ -0.9
ITGA6-211ENST00000497107 AVPP01185 164 aa9.42□□□□□ -0.9
ITGA6-211ENST00000497107 NDUFV2P19404 249 aa9.42□□□□□ -0.9
ITGA6-211ENST00000497107 GUCA2AQ02747 115 aa9.42□□□□□ -0.9
ITGA6-211ENST00000497107 NFX1Q12986 1120 aaKnown RBP9.42□□□□□ -0.9
ITGA6-211ENST00000497107 MSS51Q4VC12 460 aa9.42□□□□□ -0.9
ITGA6-211ENST00000497107 RIC3Q7Z5B4 369 aa9.42□□□□□ -0.9
ITGA6-211ENST00000497107 RAD54L2Q9Y4B4 1467 aa9.41□□□□□ -0.9
ITGA6-211ENST00000497107 TUSC1Q2TAM9 212 aa9.41□□□□□ -0.9
ITGA6-211ENST00000497107 SH3D19Q5HYK7 790 aa9.41□□□□□ -0.9
ITGA6-211ENST00000497107 USB1Q9BQ65 265 aaKnown RBP9.41□□□□□ -0.9
ITGA6-211ENST00000497107 GMPR2Q9P2T1 348 aaKnown RBP9.41□□□□□ -0.9
ITGA6-211ENST00000497107 PLEKHG3A1L390 1219 aa9.4□□□□□ -0.9
ITGA6-211ENST00000497107 SPDYE5A6NIY4 337 aa9.4□□□□□ -0.9
ITGA6-211ENST00000497107 PCDHGC3Q9UN70 934 aa9.4□□□□□ -0.9
ITGA6-211ENST00000497107 TTBK1Q5TCY1 1321 aaPredicted RBP9.39□□□□□ -0.91
ITGA6-211ENST00000497107 C6orf229H3BNL8 230 aa9.39□□□□□ -0.91
ITGA6-211ENST00000497107 CLK2P49760 499 aaKnown RBP9.39□□□□□ -0.91
ITGA6-211ENST00000497107 PRPF38BQ5VTL8 546 aaKnown RBP9.39□□□□□ -0.91
ITGA6-211ENST00000497107 RETREG3Q86VR2 466 aa9.39□□□□□ -0.91
ITGA6-211ENST00000497107 GTF3C3Q9Y5Q9 886 aa9.39□□□□□ -0.91
ITGA6-211ENST00000497107 MTMR2Q13614 643 aa9.38□□□□□ -0.91
ITGA6-211ENST00000497107 SKIV2LQ15477 1246 aaKnown RBP9.38□□□□□ -0.91
ITGA6-211ENST00000497107 LCE2CQ5TA81 110 aa9.38□□□□□ -0.91
ITGA6-211ENST00000497107 ZBTB3Q9H5J0 574 aa9.38□□□□□ -0.91
ITGA6-211ENST00000497107 TOR4AQ9NXH8 423 aa9.38□□□□□ -0.91
ITGA6-211ENST00000497107 ARAP1Q96P48 1450 aa9.38□□□□□ -0.91
ITGA6-211ENST00000497107 KIF21AQ7Z4S6 1674 aa9.38□□□□□ -0.91
ITGA6-211ENST00000497107 CUL7Q14999 1698 aa9.37□□□□□ -0.91
ITGA6-211ENST00000497107 FOXC1Q12948 553 aa9.37□□□□□ -0.91
ITGA6-211ENST00000497107 FAM160A2Q8N612 972 aaPredicted RBP9.37□□□□□ -0.91
ITGA6-211ENST00000497107 GOPCQ9HD26 462 aa9.37□□□□□ -0.91
ITGA6-211ENST00000497107 TMEM132AQ24JP5 1023 aa9.36□□□□□ -0.91
ITGA6-211ENST00000497107 LIMD1Q9UGP4 676 aa9.36□□□□□ -0.91
ITGA6-211ENST00000497107 TIMELESSQ9UNS1 1208 aa9.36□□□□□ -0.91
ITGA6-211ENST00000497107 ARHGAP35Q9NRY4 1499 aa9.35□□□□□ -0.91
ITGA6-211ENST00000497107 WDR97A6NE52 1622 aa9.35□□□□□ -0.91
ITGA6-211ENST00000497107 C11orf95C9JLR9 678 aaPredicted RBP9.35□□□□□ -0.91
ITGA6-211ENST00000497107 SMCPP49901 116 aaPredicted RBP9.35□□□□□ -0.91
ITGA6-211ENST00000497107 INSM1Q01101 510 aaPredicted RBP9.35□□□□□ -0.91
ITGA6-211ENST00000497107 IL27Q8NEV9 243 aa9.35□□□□□ -0.91
ITGA6-211ENST00000497107 SYMPKQ92797 1274 aaKnown RBP9.35□□□□□ -0.91
ITGA6-211ENST00000497107 POLR3EQ9NVU0 708 aa9.35□□□□□ -0.91
ITGA6-211ENST00000497107 PCDHB15Q9Y5E8 787 aa9.35□□□□□ -0.91
ITGA6-211ENST00000497107 AXIN1O15169 862 aa9.34□□□□□ -0.91
ITGA6-211ENST00000497107 MMP16P51512 607 aa9.34□□□□□ -0.91
ITGA6-211ENST00000497107 CSPP1Q1MSJ5 1256 aa9.34□□□□□ -0.91
ITGA6-211ENST00000497107 GAPVD1Q14C86 1478 aa9.34□□□□□ -0.91
ITGA6-211ENST00000497107 MRC2Q9UBG0 1479 aa9.34□□□□□ -0.91
ITGA6-211ENST00000497107 DXOO77932 396 aaKnown RBP9.33□□□□□ -0.92
ITGA6-211ENST00000497107 JUNDP17535 347 aa9.33□□□□□ -0.92
ITGA6-211ENST00000497107 CTC1Q2NKJ3 1217 aa9.33□□□□□ -0.92
ITGA6-211ENST00000497107 PRDM9Q9NQV7 894 aa9.33□□□□□ -0.92
ITGA6-211ENST00000497107 TDRD9Q8NDG6 1382 aaKnown RBP9.33□□□□□ -0.92
ITGA6-211ENST00000497107 ABCA5Q8WWZ7 1642 aa9.32□□□□□ -0.92
ITGA6-211ENST00000497107 NUTM2BA6NNL0 878 aaPredicted RBP9.32□□□□□ -0.92
ITGA6-211ENST00000497107 NUTM2EB1AL46 878 aaPredicted RBP9.32□□□□□ -0.92
ITGA6-211ENST00000497107 LILRB3O75022 631 aa9.32□□□□□ -0.92
ITGA6-211ENST00000497107 RPIAP49247 311 aa9.32□□□□□ -0.92
ITGA6-211ENST00000497107 NUTM2DQ5VT03 806 aaPredicted RBP9.32□□□□□ -0.92
ITGA6-211ENST00000497107 DESI1Q6ICB0 168 aa9.32□□□□□ -0.92
ITGA6-211ENST00000497107 NUTM2AQ8IVF1 878 aaPredicted RBP9.32□□□□□ -0.92
ITGA6-211ENST00000497107 PRR7Q8TB68 274 aa9.32□□□□□ -0.92
ITGA6-211ENST00000497107 PCMTD1Q96MG8 357 aaPredicted RBP9.32□□□□□ -0.92
ITGA6-211ENST00000497107 ATP1B4Q9UN42 357 aaPredicted RBP9.32□□□□□ -0.92
ITGA6-211ENST00000497107 ERICH6Q7L0X2 663 aa9.31□□□□□ -0.92
ITGA6-211ENST00000497107 CCER1Q8TC90 406 aaPredicted RBP9.31□□□□□ -0.92
ITGA6-211ENST00000497107 TARBP1Q13395 1621 aaKnown RBP9.31□□□□□ -0.92
ITGA6-211ENST00000497107 LOC100996750A0A140TA64 210 aa9.3□□□□□ -0.92
ITGA6-211ENST00000497107 CABLES1Q8TDN4 633 aa9.3□□□□□ -0.92
ITGA6-211ENST00000497107 KRTAP4-6Q9BYQ5 205 aa9.3□□□□□ -0.92
ITGA6-211ENST00000497107 FCF1Q9Y324 198 aaKnown RBP9.3□□□□□ -0.92
ITGA6-211ENST00000497107 QPCTQ16769 361 aa9.29□□□□□ -0.92
ITGA6-211ENST00000497107 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.29□□□□□ -0.92
ITGA6-211ENST00000497107 FHAD1B1AJZ9 1412 aa9.29□□□□□ -0.92
ITGA6-211ENST00000497107 EFCAB5A4FU69 1503 aa9.28□□□□□ -0.92
ITGA6-211ENST00000497107 CYP4X1Q8N118 509 aa9.28□□□□□ -0.92
ITGA6-211ENST00000497107 MAP3K1Q13233 1512 aa9.27□□□□□ -0.93
ITGA6-211ENST00000497107 CTTNBP2Q8WZ74 1663 aa9.27□□□□□ -0.93
ITGA6-211ENST00000497107 CFAP99D6REC4 459 aa9.27□□□□□ -0.93
ITGA6-211ENST00000497107 PTPRNQ16849 979 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms