RNA–Protein interactions for RNA: ENST00000496015.5

ABCD4-217, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 1,248 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-217ENST00000496015 PLEKHG3A1L390 1219 aa19.51■□□□□ 0.71
ABCD4-217ENST00000496015 FAM83GA6ND36 823 aa19.51■□□□□ 0.71
ABCD4-217ENST00000496015 TRIM26Q12899 539 aaPredicted RBP19.51■□□□□ 0.71
ABCD4-217ENST00000496015 CCDC9Q9Y3X0 531 aaKnown RBP19.51■□□□□ 0.71
ABCD4-217ENST00000496015 ROCK2O75116 1388 aaKnown RBP19.51■□□□□ 0.71
ABCD4-217ENST00000496015 ACEP12821 1306 aa19.51■□□□□ 0.71
ABCD4-217ENST00000496015 RALGAPBQ86X10 1494 aa19.5■□□□□ 0.71
ABCD4-217ENST00000496015 POLR3AO14802 1390 aaPredicted RBP19.5■□□□□ 0.71
ABCD4-217ENST00000496015 VPS72Q15906 364 aa19.5■□□□□ 0.71
ABCD4-217ENST00000496015 NBPF8Q3BBV2 869 aa19.5■□□□□ 0.71
ABCD4-217ENST00000496015 COL14A1Q05707 1796 aaKnown RBP19.49■□□□□ 0.71
ABCD4-217ENST00000496015 CABP2Q9NPB3 220 aa19.48■□□□□ 0.71
ABCD4-217ENST00000496015 PPIP5K1Q6PFW1 1433 aa19.47■□□□□ 0.71
ABCD4-217ENST00000496015 GLI3P10071 1580 aa19.47■□□□□ 0.71
ABCD4-217ENST00000496015 EVC2Q86UK5 1308 aa19.47■□□□□ 0.71
ABCD4-217ENST00000496015 BTG4Q9NY30 223 aa19.46■□□□□ 0.71
ABCD4-217ENST00000496015 TONSLQ96HA7 1378 aa19.45■□□□□ 0.7
ABCD4-217ENST00000496015 CRYBG1Q9Y4K1 1723 aa19.45■□□□□ 0.7
ABCD4-217ENST00000496015 ABTB2Q8N961 1025 aa19.45■□□□□ 0.7
ABCD4-217ENST00000496015 PRDM11Q9NQV5 511 aa19.45■□□□□ 0.7
ABCD4-217ENST00000496015 EP400Q96L91 3159 aa19.45■□□□□ 0.7
ABCD4-217ENST00000496015 CCDC125Q86Z20 511 aa19.44■□□□□ 0.7
ABCD4-217ENST00000496015 NUTM2GQ5VZR2 741 aa19.43■□□□□ 0.7
ABCD4-217ENST00000496015 BRD4O60885 1362 aaPredicted RBP19.43■□□□□ 0.7
ABCD4-217ENST00000496015 NRAPQ86VF7 1730 aa19.42■□□□□ 0.7
ABCD4-217ENST00000496015 SEPT12Q8IYM1 358 aa19.42■□□□□ 0.7
ABCD4-217ENST00000496015 BRWD3Q6RI45 1802 aa19.41■□□□□ 0.7
ABCD4-217ENST00000496015 PHRF1Q9P1Y6 1649 aaKnown RBP19.41■□□□□ 0.7
ABCD4-217ENST00000496015 A0A0G2JS52 829 aa19.41■□□□□ 0.7
ABCD4-217ENST00000496015 ONECUT3O60422 494 aaPredicted RBP19.41■□□□□ 0.7
ABCD4-217ENST00000496015 MYT1Q01538 1121 aa19.41■□□□□ 0.7
ABCD4-217ENST00000496015 CABP1Q9NZU7 370 aa19.41■□□□□ 0.7
ABCD4-217ENST00000496015 NLRP13Q86W25 1043 aa19.4■□□□□ 0.7
ABCD4-217ENST00000496015 KIAA0232Q92628 1395 aa19.4■□□□□ 0.7
ABCD4-217ENST00000496015 ZC3H6P61129 1189 aaKnown RBP19.39■□□□□ 0.69
ABCD4-217ENST00000496015 CARD11Q9BXL7 1154 aa19.39■□□□□ 0.69
ABCD4-217ENST00000496015 KRT27Q7Z3Y8 459 aa19.37■□□□□ 0.69
ABCD4-217ENST00000496015 SPATA31A5Q5VU36 1347 aa19.36■□□□□ 0.69
ABCD4-217ENST00000496015 SPATA31A7Q8IWB4 1347 aa19.36■□□□□ 0.69
ABCD4-217ENST00000496015 CHRNA2Q15822 529 aa19.36■□□□□ 0.69
ABCD4-217ENST00000496015 FAM98CQ17RN3 349 aaKnown RBP19.36■□□□□ 0.69
ABCD4-217ENST00000496015 ZNF692Q9BU19 519 aaPredicted RBP19.36■□□□□ 0.69
ABCD4-217ENST00000496015 USP6P35125 1406 aa19.35■□□□□ 0.69
ABCD4-217ENST00000496015 EVA1CP58658 441 aa19.35■□□□□ 0.69
ABCD4-217ENST00000496015 USP19O94966 1318 aa19.34■□□□□ 0.69
ABCD4-217ENST00000496015 SF3B2Q13435 895 aaKnown RBP19.34■□□□□ 0.69
ABCD4-217ENST00000496015 STRN4Q9NRL3 753 aa19.34■□□□□ 0.69
ABCD4-217ENST00000496015 CPDO75976 1380 aa19.33■□□□□ 0.69
ABCD4-217ENST00000496015 SBNO2Q9Y2G9 1366 aa19.33■□□□□ 0.69
ABCD4-217ENST00000496015 NRKQ7Z2Y5 1582 aa19.33■□□□□ 0.69
ABCD4-217ENST00000496015 GCP02774 474 aa19.33■□□□□ 0.68
ABCD4-217ENST00000496015 NLRP6P59044 892 aa19.33■□□□□ 0.68
ABCD4-217ENST00000496015 BLMP54132 1417 aaPredicted RBP19.33■□□□□ 0.68
ABCD4-217ENST00000496015 AKAP12Q02952 1782 aa19.31■□□□□ 0.68
ABCD4-217ENST00000496015 SPATA31A1Q5TZJ5 1347 aa19.3■□□□□ 0.68
ABCD4-217ENST00000496015 SSH2Q76I76 1423 aa19.28■□□□□ 0.68
ABCD4-217ENST00000496015 ZRANB1Q9UGI0 708 aa19.28■□□□□ 0.68
ABCD4-217ENST00000496015 SRCAPQ6ZRS2 3230 aa19.28■□□□□ 0.68
ABCD4-217ENST00000496015 TTC21AQ8NDW8 1320 aa19.27■□□□□ 0.68
ABCD4-217ENST00000496015 SLC24A1O60721 1099 aa19.27■□□□□ 0.68
ABCD4-217ENST00000496015 USP35Q9P2H5 1018 aa19.27■□□□□ 0.68
ABCD4-217ENST00000496015 KTN1Q86UP2 1357 aaKnown RBP19.27■□□□□ 0.68
ABCD4-217ENST00000496015 PIK3C2AO00443 1686 aa19.27■□□□□ 0.67
ABCD4-217ENST00000496015 CAMTA1Q9Y6Y1 1673 aa19.27■□□□□ 0.67
ABCD4-217ENST00000496015 TTC21BQ7Z4L5 1316 aa19.26■□□□□ 0.67
ABCD4-217ENST00000496015 ZBTB7CA1YPR0 619 aa19.26■□□□□ 0.67
ABCD4-217ENST00000496015 KCNH5Q8NCM2 988 aa19.26■□□□□ 0.67
ABCD4-217ENST00000496015 LMO7Q8WWI1 1683 aa19.26■□□□□ 0.67
ABCD4-217ENST00000496015 THSD7AQ9UPZ6 1657 aa19.26■□□□□ 0.67
ABCD4-217ENST00000496015 TMC1Q8TDI8 760 aa19.25■□□□□ 0.67
ABCD4-217ENST00000496015 SLIT3O75094 1523 aa19.25■□□□□ 0.67
ABCD4-217ENST00000496015 CPSF1Q10570 1443 aaKnown RBP19.25■□□□□ 0.67
ABCD4-217ENST00000496015 LARP1Q6PKG0 1096 aaKnown RBP19.24■□□□□ 0.67
ABCD4-217ENST00000496015 BARGINQ6ZT62 677 aa19.24■□□□□ 0.67
ABCD4-217ENST00000496015 MON2Q7Z3U7 1717 aa19.23■□□□□ 0.67
ABCD4-217ENST00000496015 AATKQ6ZMQ8 1374 aa19.23■□□□□ 0.67
ABCD4-217ENST00000496015 HDGFL2Q7Z4V5 671 aaPredicted RBP19.23■□□□□ 0.67
ABCD4-217ENST00000496015 TCP11L2Q8N4U5 519 aa19.23■□□□□ 0.67
ABCD4-217ENST00000496015 PUS7Q96PZ0 661 aaKnown RBP19.23■□□□□ 0.67
ABCD4-217ENST00000496015 THRAP3Q9Y2W1 955 aaKnown RBP19.22■□□□□ 0.67
ABCD4-217ENST00000496015 BAG6P46379 1132 aa19.21■□□□□ 0.67
ABCD4-217ENST00000496015 PDE3BQ13370 1112 aa19.21■□□□□ 0.67
ABCD4-217ENST00000496015 DEFB132Q7Z7B7 95 aa19.21■□□□□ 0.67
ABCD4-217ENST00000496015 TERF2IPQ9NYB0 399 aa19.21■□□□□ 0.67
ABCD4-217ENST00000496015 COL5A2P05997 1499 aaPredicted RBP19.21■□□□□ 0.67
ABCD4-217ENST00000496015 RGPD1P0DJD0 1748 aa19.2■□□□□ 0.66
ABCD4-217ENST00000496015 ST20-MTHFSA0A0A6YYL1 179 aa19.19■□□□□ 0.66
ABCD4-217ENST00000496015 FAM182BQ5T319 152 aa19.19■□□□□ 0.66
ABCD4-217ENST00000496015 FAM196AQ6ZSG2 479 aa19.19■□□□□ 0.66
ABCD4-217ENST00000496015 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.19■□□□□ 0.66
ABCD4-217ENST00000496015 CRB1P82279 1406 aa19.18■□□□□ 0.66
ABCD4-217ENST00000496015 SOX12O15370 315 aa19.18■□□□□ 0.66
ABCD4-217ENST00000496015 PCGF6Q9BYE7 350 aa19.18■□□□□ 0.66
ABCD4-217ENST00000496015 SLC12A5Q9H2X9 1139 aa19.18■□□□□ 0.66
ABCD4-217ENST00000496015 TOM1L2Q6ZVM7 507 aa19.17■□□□□ 0.66
ABCD4-217ENST00000496015 ARHGEF25Q86VW2 580 aa19.17■□□□□ 0.66
ABCD4-217ENST00000496015 TIMELESSQ9UNS1 1208 aa19.17■□□□□ 0.66
ABCD4-217ENST00000496015 NINLQ9Y2I6 1382 aa19.17■□□□□ 0.66
ABCD4-217ENST00000496015 COL18A1P39060 1754 aa19.16■□□□□ 0.66
ABCD4-217ENST00000496015 TESK2Q96S53 571 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms