RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 COL14A1Q05707 1796 aaKnown RBP33.76■■■■□ 3
COL27A1-208ENST00000494780 PAK3O75914 559 aaPredicted RBP33.76■■■□□ 2.99
COL27A1-208ENST00000494780 BTG4Q9NY30 223 aa33.75■■■□□ 2.99
COL27A1-208ENST00000494780 NRAPQ86VF7 1730 aa33.75■■■□□ 2.99
COL27A1-208ENST00000494780 CDK19Q9BWU1 502 aa33.74■■■□□ 2.99
COL27A1-208ENST00000494780 CRYBG1Q9Y4K1 1723 aa33.73■■■□□ 2.99
COL27A1-208ENST00000494780 KRT27Q7Z3Y8 459 aa33.71■■■□□ 2.99
COL27A1-208ENST00000494780 SF3B2Q13435 895 aaKnown RBP33.67■■■□□ 2.98
COL27A1-208ENST00000494780 CCDC61Q9Y6R9 512 aa33.67■■■□□ 2.98
COL27A1-208ENST00000494780 POLR3AO14802 1390 aaPredicted RBP33.67■■■□□ 2.98
COL27A1-208ENST00000494780 FAM98CQ17RN3 349 aaKnown RBP33.66■■■□□ 2.98
COL27A1-208ENST00000494780 NBPF1Q3BBV0 1214 aa33.66■■■□□ 2.98
COL27A1-208ENST00000494780 TOPAZ1Q8N9V7 1692 aa33.66■■■□□ 2.98
COL27A1-208ENST00000494780 PRDM11Q9NQV5 511 aa33.66■■■□□ 2.98
COL27A1-208ENST00000494780 A0A0G2JS52 829 aa33.65■■■□□ 2.98
COL27A1-208ENST00000494780 MYT1Q01538 1121 aa33.65■■■□□ 2.98
COL27A1-208ENST00000494780 ACEP12821 1306 aa33.63■■■□□ 2.97
COL27A1-208ENST00000494780 SPATA31A5Q5VU36 1347 aa33.63■■■□□ 2.97
COL27A1-208ENST00000494780 SPATA31A7Q8IWB4 1347 aa33.63■■■□□ 2.97
COL27A1-208ENST00000494780 PLEKHG3A1L390 1219 aa33.63■■■□□ 2.97
COL27A1-208ENST00000494780 NBPF8Q3BBV2 869 aa33.62■■■□□ 2.97
COL27A1-208ENST00000494780 DEFB132Q7Z7B7 95 aa33.61■■■□□ 2.97
COL27A1-208ENST00000494780 KIAA0232Q92628 1395 aa33.6■■■□□ 2.97
COL27A1-208ENST00000494780 PHRF1Q9P1Y6 1649 aaKnown RBP33.59■■■□□ 2.97
COL27A1-208ENST00000494780 CENPJQ9HC77 1338 aaPredicted RBP33.57■■■□□ 2.97
COL27A1-208ENST00000494780 NUTM2GQ5VZR2 741 aa33.55■■■□□ 2.96
COL27A1-208ENST00000494780 SRPK2P78362 688 aaKnown RBP33.54■■■□□ 2.96
COL27A1-208ENST00000494780 CHRNA2Q15822 529 aa33.53■■■□□ 2.96
COL27A1-208ENST00000494780 THSD7AQ9UPZ6 1657 aa33.52■■■□□ 2.96
COL27A1-208ENST00000494780 ZC3H6P61129 1189 aaKnown RBP33.52■■■□□ 2.96
COL27A1-208ENST00000494780 SPATA31A1Q5TZJ5 1347 aa33.52■■■□□ 2.96
COL27A1-208ENST00000494780 ABTB2Q8N961 1025 aa33.51■■■□□ 2.95
COL27A1-208ENST00000494780 PPIP5K1Q6PFW1 1433 aa33.51■■■□□ 2.95
COL27A1-208ENST00000494780 L3MBTL2Q969R5 705 aa33.5■■■□□ 2.95
COL27A1-208ENST00000494780 BAG6P46379 1132 aa33.49■■■□□ 2.95
COL27A1-208ENST00000494780 CABP2Q9NPB3 220 aa33.48■■■□□ 2.95
COL27A1-208ENST00000494780 STRN4Q9NRL3 753 aa33.48■■■□□ 2.95
COL27A1-208ENST00000494780 QRICH2Q9H0J4 1663 aa33.47■■■□□ 2.95
COL27A1-208ENST00000494780 USP19O94966 1318 aa33.47■■■□□ 2.95
COL27A1-208ENST00000494780 NRKQ7Z2Y5 1582 aa33.47■■■□□ 2.95
COL27A1-208ENST00000494780 BRD4O60885 1362 aaPredicted RBP33.47■■■□□ 2.95
COL27A1-208ENST00000494780 CPDO75976 1380 aa33.45■■■□□ 2.94
COL27A1-208ENST00000494780 NLRP13Q86W25 1043 aa33.44■■■□□ 2.94
COL27A1-208ENST00000494780 RGPD1P0DJD0 1748 aa33.43■■■□□ 2.94
COL27A1-208ENST00000494780 SRCAPQ6ZRS2 3230 aa33.42■■■□□ 2.94
COL27A1-208ENST00000494780 EVA1CP58658 441 aa33.42■■■□□ 2.94
COL27A1-208ENST00000494780 FAM182BQ5T319 152 aa33.42■■■□□ 2.94
COL27A1-208ENST00000494780 SSH2Q76I76 1423 aa33.42■■■□□ 2.94
COL27A1-208ENST00000494780 SIN3AQ96ST3 1273 aa33.4■■■□□ 2.94
COL27A1-208ENST00000494780 GCP02774 474 aa33.39■■■□□ 2.94
COL27A1-208ENST00000494780 CABP1Q9NZU7 370 aa33.39■■■□□ 2.94
COL27A1-208ENST00000494780 CAMTA1Q9Y6Y1 1673 aa33.39■■■□□ 2.94
COL27A1-208ENST00000494780 TRPM1Q7Z4N2 1603 aa33.39■■■□□ 2.93
COL27A1-208ENST00000494780 BARGINQ6ZT62 677 aa33.38■■■□□ 2.93
COL27A1-208ENST00000494780 LMO7Q8WWI1 1683 aa33.38■■■□□ 2.93
COL27A1-208ENST00000494780 USP6P35125 1406 aa33.36■■■□□ 2.93
COL27A1-208ENST00000494780 EVC2Q86UK5 1308 aa33.36■■■□□ 2.93
COL27A1-208ENST00000494780 USP35Q9P2H5 1018 aa33.36■■■□□ 2.93
COL27A1-208ENST00000494780 DISP2A7MBM2 1401 aa33.36■■■□□ 2.93
COL27A1-208ENST00000494780 EN1Q05925 392 aaPredicted RBP33.35■■■□□ 2.93
COL27A1-208ENST00000494780 FAM196AQ6ZSG2 479 aa33.35■■■□□ 2.93
COL27A1-208ENST00000494780 LARP1Q6PKG0 1096 aaKnown RBP33.34■■■□□ 2.93
COL27A1-208ENST00000494780 NEUROD1Q13562 356 aa33.33■■■□□ 2.93
COL27A1-208ENST00000494780 ROCK2O75116 1388 aaKnown RBP33.33■■■□□ 2.93
COL27A1-208ENST00000494780 TCP11L2Q8N4U5 519 aa33.32■■■□□ 2.92
COL27A1-208ENST00000494780 TNS1Q9HBL0 1735 aaKnown RBP33.31■■■□□ 2.92
COL27A1-208ENST00000494780 NLRP6P59044 892 aa33.3■■■□□ 2.92
COL27A1-208ENST00000494780 THRAP3Q9Y2W1 955 aaKnown RBP33.3■■■□□ 2.92
COL27A1-208ENST00000494780 PDE3BQ13370 1112 aa33.29■■■□□ 2.92
COL27A1-208ENST00000494780 SLIT3O75094 1523 aa33.28■■■□□ 2.92
COL27A1-208ENST00000494780 COL5A2P05997 1499 aaPredicted RBP33.27■■■□□ 2.92
COL27A1-208ENST00000494780 PSDA5PKW4 1024 aaPredicted RBP33.27■■■□□ 2.92
COL27A1-208ENST00000494780 TRIM37O94972 964 aa33.26■■■□□ 2.91
COL27A1-208ENST00000494780 LRP5O75197 1615 aa33.26■■■□□ 2.91
COL27A1-208ENST00000494780 AATKQ6ZMQ8 1374 aa33.24■■■□□ 2.91
COL27A1-208ENST00000494780 ZNF692Q9BU19 519 aaPredicted RBP33.24■■■□□ 2.91
COL27A1-208ENST00000494780 CRB1P82279 1406 aa33.22■■■□□ 2.91
COL27A1-208ENST00000494780 EZH2Q15910 746 aaKnown RBP33.22■■■□□ 2.91
COL27A1-208ENST00000494780 PIK3C2AO00443 1686 aa33.22■■■□□ 2.91
COL27A1-208ENST00000494780 ZBTB7CA1YPR0 619 aa33.21■■■□□ 2.91
COL27A1-208ENST00000494780 CAMKK2Q96RR4 588 aa33.21■■■□□ 2.91
COL27A1-208ENST00000494780 PARD3Q8TEW0 1356 aa33.2■■■□□ 2.9
COL27A1-208ENST00000494780 APBA3O96018 575 aa33.19■■■□□ 2.9
COL27A1-208ENST00000494780 TTC21BQ7Z4L5 1316 aa33.19■■■□□ 2.9
COL27A1-208ENST00000494780 PARP4Q9UKK3 1724 aaKnown RBP33.18■■■□□ 2.9
COL27A1-208ENST00000494780 AKAP12Q02952 1782 aa33.16■■■□□ 2.9
COL27A1-208ENST00000494780 TTC21AQ8NDW8 1320 aa33.16■■■□□ 2.9
COL27A1-208ENST00000494780 C11orf95C9JLR9 678 aaPredicted RBP33.15■■■□□ 2.9
COL27A1-208ENST00000494780 R3HDM1Q15032 1099 aaKnown RBP33.15■■■□□ 2.9
COL27A1-208ENST00000494780 CPSF1Q10570 1443 aaKnown RBP33.14■■■□□ 2.9
COL27A1-208ENST00000494780 KCNH5Q8NCM2 988 aa33.14■■■□□ 2.9
COL27A1-208ENST00000494780 COL18A1P39060 1754 aa33.14■■■□□ 2.9
COL27A1-208ENST00000494780 SBNO2Q9Y2G9 1366 aa33.13■■■□□ 2.89
COL27A1-208ENST00000494780 TOM1L2Q6ZVM7 507 aa33.11■■■□□ 2.89
COL27A1-208ENST00000494780 ARHGEF25Q86VW2 580 aa33.11■■■□□ 2.89
COL27A1-208ENST00000494780 KTN1Q86UP2 1357 aaKnown RBP33.09■■■□□ 2.89
COL27A1-208ENST00000494780 WDR17Q8IZU2 1322 aa33.09■■■□□ 2.89
COL27A1-208ENST00000494780 AXIN2Q9Y2T1 843 aa33.09■■■□□ 2.89
COL27A1-208ENST00000494780 CARD11Q9BXL7 1154 aa33.08■■■□□ 2.89
COL27A1-208ENST00000494780 RREB1Q92766 1687 aa33.07■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms