RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 KTN1Q86UP2 1357 aaKnown RBP15.49■□□□□ 0.07
APTX-230ENST00000494649 ABTB2Q8N961 1025 aa15.48■□□□□ 0.07
APTX-230ENST00000494649 CD163L1Q9NR16 1453 aa15.48■□□□□ 0.07
APTX-230ENST00000494649 A0A1W2PP64 1363 aa15.48■□□□□ 0.07
APTX-230ENST00000494649 SBNO1A3KN83 1393 aa15.48■□□□□ 0.07
APTX-230ENST00000494649 SLC24A1O60721 1099 aa15.48■□□□□ 0.07
APTX-230ENST00000494649 SPATA31A6Q5VVP1 1343 aa15.47■□□□□ 0.07
APTX-230ENST00000494649 CDCA8Q53HL2 280 aa15.47■□□□□ 0.07
APTX-230ENST00000494649 HDGFL2Q7Z4V5 671 aaPredicted RBP15.47■□□□□ 0.07
APTX-230ENST00000494649 C8orf37Q96NL8 207 aa15.47■□□□□ 0.07
APTX-230ENST00000494649 PHF23Q9BUL5 403 aaPredicted RBP15.47■□□□□ 0.07
APTX-230ENST00000494649 SOX12O15370 315 aa15.46■□□□□ 0.07
APTX-230ENST00000494649 CPSF1Q10570 1443 aaKnown RBP15.46■□□□□ 0.07
APTX-230ENST00000494649 TERF2IPQ9NYB0 399 aa15.45■□□□□ 0.06
APTX-230ENST00000494649 ZRANB1Q9UGI0 708 aa15.45■□□□□ 0.06
APTX-230ENST00000494649 PUS7Q96PZ0 661 aaKnown RBP15.45■□□□□ 0.06
APTX-230ENST00000494649 ZNF692Q9BU19 519 aaPredicted RBP15.45■□□□□ 0.06
APTX-230ENST00000494649 ARHGEF10O15013 1369 aa15.45■□□□□ 0.06
APTX-230ENST00000494649 ALS2Q96Q42 1657 aa15.44■□□□□ 0.06
APTX-230ENST00000494649 KIF7Q2M1P5 1343 aa15.44■□□□□ 0.06
APTX-230ENST00000494649 TTC21BQ7Z4L5 1316 aa15.44■□□□□ 0.06
APTX-230ENST00000494649 AKAP12Q02952 1782 aa15.44■□□□□ 0.06
APTX-230ENST00000494649 NLRP6P59044 892 aa15.44■□□□□ 0.06
APTX-230ENST00000494649 NME9Q86XW9 330 aa15.44■□□□□ 0.06
APTX-230ENST00000494649 MYOM1P52179 1685 aa15.43■□□□□ 0.06
APTX-230ENST00000494649 ZEB1P37275 1124 aaPredicted RBP15.43■□□□□ 0.06
APTX-230ENST00000494649 ZBTB7CA1YPR0 619 aa15.42■□□□□ 0.06
APTX-230ENST00000494649 COL22A1Q8NFW1 1626 aaPredicted RBP15.42■□□□□ 0.06
APTX-230ENST00000494649 SSH2Q76I76 1423 aa15.42■□□□□ 0.06
APTX-230ENST00000494649 ANKRD36BQ8N2N9 1353 aa15.41■□□□□ 0.06
APTX-230ENST00000494649 ZC3H6P61129 1189 aaKnown RBP15.41■□□□□ 0.06
APTX-230ENST00000494649 MON2Q7Z3U7 1717 aa15.41■□□□□ 0.06
APTX-230ENST00000494649 NINLQ9Y2I6 1382 aa15.41■□□□□ 0.06
APTX-230ENST00000494649 NRKQ7Z2Y5 1582 aa15.41■□□□□ 0.06
APTX-230ENST00000494649 NGLY1Q96IV0 654 aa15.4■□□□□ 0.06
APTX-230ENST00000494649 WASHC2AQ641Q2 1341 aa15.4■□□□□ 0.06
APTX-230ENST00000494649 PIK3C2AO00443 1686 aa15.4■□□□□ 0.06
APTX-230ENST00000494649 CARD14Q9BXL6 1004 aa15.4■□□□□ 0.06
APTX-230ENST00000494649 NLRP13Q86W25 1043 aa15.39■□□□□ 0.05
APTX-230ENST00000494649 ABCA3Q99758 1704 aa15.39■□□□□ 0.05
APTX-230ENST00000494649 CNGB1Q14028 1251 aaPredicted RBP15.39■□□□□ 0.05
APTX-230ENST00000494649 CHRNA2Q15822 529 aa15.39■□□□□ 0.05
APTX-230ENST00000494649 PANK3Q9H999 370 aa15.39■□□□□ 0.05
APTX-230ENST00000494649 RGS17Q9UGC6 210 aaPredicted RBP15.39■□□□□ 0.05
APTX-230ENST00000494649 EDC4Q6P2E9 1401 aaKnown RBP15.38■□□□□ 0.05
APTX-230ENST00000494649 AFF2P51816 1311 aa15.38■□□□□ 0.05
APTX-230ENST00000494649 NSD3Q9BZ95 1437 aa15.38■□□□□ 0.05
APTX-230ENST00000494649 GGNBP2Q9H3C7 697 aa15.37■□□□□ 0.05
APTX-230ENST00000494649 TTC21AQ8NDW8 1320 aa15.37■□□□□ 0.05
APTX-230ENST00000494649 CCDC7Q96M83 1385 aa15.37■□□□□ 0.05
APTX-230ENST00000494649 FAM83GA6ND36 823 aa15.36■□□□□ 0.05
APTX-230ENST00000494649 GCP02774 474 aa15.36■□□□□ 0.05
APTX-230ENST00000494649 FBLN1P23142 703 aa15.36■□□□□ 0.05
APTX-230ENST00000494649 KIAA0232Q92628 1395 aa15.36■□□□□ 0.05
APTX-230ENST00000494649 PRDM11Q9NQV5 511 aa15.36■□□□□ 0.05
APTX-230ENST00000494649 PHRF1Q9P1Y6 1649 aaKnown RBP15.36■□□□□ 0.05
APTX-230ENST00000494649 CRYBG1Q9Y4K1 1723 aa15.36■□□□□ 0.05
APTX-230ENST00000494649 BRD4O60885 1362 aaPredicted RBP15.34■□□□□ 0.05
APTX-230ENST00000494649 USP19O94966 1318 aa15.34■□□□□ 0.05
APTX-230ENST00000494649 FYB1O15117 783 aa15.34■□□□□ 0.05
APTX-230ENST00000494649 POTEAQ6S8J7 498 aa15.34■□□□□ 0.05
APTX-230ENST00000494649 USP21Q9UK80 565 aa15.34■□□□□ 0.05
APTX-230ENST00000494649 MARF1Q9Y4F3 1742 aaKnown RBP15.33■□□□□ 0.04
APTX-230ENST00000494649 BTG4Q9NY30 223 aa15.32■□□□□ 0.04
APTX-230ENST00000494649 COG3Q96JB2 828 aa15.32■□□□□ 0.04
APTX-230ENST00000494649 TNNT2P45379 298 aaPredicted RBP15.31■□□□□ 0.04
APTX-230ENST00000494649 OVOS2A0A0J9YW53 1432 aa15.3■□□□□ 0.04
APTX-230ENST00000494649 OVOS2Q6IE36 1432 aa15.3■□□□□ 0.04
APTX-230ENST00000494649 STRN4Q9NRL3 753 aa15.3■□□□□ 0.04
APTX-230ENST00000494649 SLIT3O75094 1523 aa15.3■□□□□ 0.04
APTX-230ENST00000494649 FNBP4Q8N3X1 1017 aaPredicted RBP15.29■□□□□ 0.04
APTX-230ENST00000494649 CCDC9Q9Y3X0 531 aaKnown RBP15.29■□□□□ 0.04
APTX-230ENST00000494649 BCL9LQ86UU0 1499 aa15.29■□□□□ 0.04
APTX-230ENST00000494649 ZNF772Q68DY9 489 aaPredicted RBP15.29■□□□□ 0.04
APTX-230ENST00000494649 QTRT2Q9H974 415 aaKnown RBP15.29■□□□□ 0.04
APTX-230ENST00000494649 USP31Q70CQ4 1352 aa15.29■□□□□ 0.04
APTX-230ENST00000494649 PLCH1Q4KWH8 1693 aa15.29■□□□□ 0.04
APTX-230ENST00000494649 CGNL1Q0VF96 1302 aa15.28■□□□□ 0.04
APTX-230ENST00000494649 RRS1Q15050 365 aaKnown RBP15.28■□□□□ 0.04
APTX-230ENST00000494649 KCNH5Q8NCM2 988 aa15.28■□□□□ 0.04
APTX-230ENST00000494649 KNSTRNQ9Y448 316 aa15.28■□□□□ 0.04
APTX-230ENST00000494649 KIF20BQ96Q89 1820 aa15.27■□□□□ 0.04
APTX-230ENST00000494649 SLIT2O94813 1529 aa15.27■□□□□ 0.04
APTX-230ENST00000494649 CC2D1BQ5T0F9 858 aaKnown RBP15.27■□□□□ 0.03
APTX-230ENST00000494649 UNC5CLQ8IV45 518 aa15.27■□□□□ 0.03
APTX-230ENST00000494649 USP35Q9P2H5 1018 aa15.27■□□□□ 0.03
APTX-230ENST00000494649 AXIN2Q9Y2T1 843 aa15.27■□□□□ 0.03
APTX-230ENST00000494649 NFAT5O94916 1531 aa15.26■□□□□ 0.03
APTX-230ENST00000494649 ARHGEF25Q86VW2 580 aa15.26■□□□□ 0.03
APTX-230ENST00000494649 COL14A1Q05707 1796 aaKnown RBP15.25■□□□□ 0.03
APTX-230ENST00000494649 CAMTA1Q9Y6Y1 1673 aa15.25■□□□□ 0.03
APTX-230ENST00000494649 CPDO75976 1380 aa15.25■□□□□ 0.03
APTX-230ENST00000494649 PPM1GO15355 546 aaPredicted RBP15.24■□□□□ 0.03
APTX-230ENST00000494649 EVA1CP58658 441 aa15.24■□□□□ 0.03
APTX-230ENST00000494649 DDX10Q13206 875 aaKnown RBP15.24■□□□□ 0.03
APTX-230ENST00000494649 TRPC5Q9UL62 973 aaPredicted RBP15.24■□□□□ 0.03
APTX-230ENST00000494649 PER1O15534 1290 aaPredicted RBP15.24■□□□□ 0.03
APTX-230ENST00000494649 MAP3K19Q56UN5 1328 aa15.23■□□□□ 0.03
APTX-230ENST00000494649 RXRBP28702 533 aa15.23■□□□□ 0.03
APTX-230ENST00000494649 LARP1Q6PKG0 1096 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms