RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 TMCO4Q5TGY1 634 aa7.23□□□□□ -1.25
CMSS1-207ENST00000494412 SLC6A16Q9GZN6 736 aa7.23□□□□□ -1.25
CMSS1-207ENST00000494412 GZF1Q9H116 711 aaPredicted RBP7.23□□□□□ -1.25
CMSS1-207ENST00000494412 HMX1Q9NP08 348 aaPredicted RBP7.23□□□□□ -1.25
CMSS1-207ENST00000494412 CTDSPL2Q05D32 466 aa7.22□□□□□ -1.25
CMSS1-207ENST00000494412 WASHC4Q2M389 1173 aa7.22□□□□□ -1.25
CMSS1-207ENST00000494412 HELBQ8NG08 1087 aaPredicted RBP7.22□□□□□ -1.25
CMSS1-207ENST00000494412 ADAMTS19Q8TE59 1207 aa7.22□□□□□ -1.25
CMSS1-207ENST00000494412 PBXIP1Q96AQ6 731 aa7.22□□□□□ -1.25
CMSS1-207ENST00000494412 USB1Q9BQ65 265 aaKnown RBP7.22□□□□□ -1.25
CMSS1-207ENST00000494412 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.21□□□□□ -1.26
CMSS1-207ENST00000494412 VAC14Q08AM6 782 aa7.21□□□□□ -1.26
CMSS1-207ENST00000494412 MTMR2Q13614 643 aa7.21□□□□□ -1.26
CMSS1-207ENST00000494412 RNF223E7ERA6 249 aa7.2□□□□□ -1.26
CMSS1-207ENST00000494412 RETREG3Q86VR2 466 aa7.2□□□□□ -1.26
CMSS1-207ENST00000494412 LRRN4Q8WUT4 740 aa7.2□□□□□ -1.26
CMSS1-207ENST00000494412 TRIM34Q9BYJ4 488 aa7.2□□□□□ -1.26
CMSS1-207ENST00000494412 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.2□□□□□ -1.26
CMSS1-207ENST00000494412 CFAP99D6REC4 459 aa7.19□□□□□ -1.26
CMSS1-207ENST00000494412 MSS51Q4VC12 460 aa7.19□□□□□ -1.26
CMSS1-207ENST00000494412 PRR7Q8TB68 274 aa7.19□□□□□ -1.26
CMSS1-207ENST00000494412 GPR37L1O60883 481 aa7.18□□□□□ -1.26
CMSS1-207ENST00000494412 CSB-PGBD3P0DP91 1061 aa7.18□□□□□ -1.26
CMSS1-207ENST00000494412 MFAP1P55081 439 aaKnown RBP7.18□□□□□ -1.26
CMSS1-207ENST00000494412 CFAP70Q5T0N1 1121 aa7.18□□□□□ -1.26
CMSS1-207ENST00000494412 PPP1R12CQ9BZL4 782 aa7.18□□□□□ -1.26
CMSS1-207ENST00000494412 GGCXP38435 758 aa7.17□□□□□ -1.26
CMSS1-207ENST00000494412 PLA2G2CQ5R387 149 aa7.17□□□□□ -1.26
CMSS1-207ENST00000494412 PATL2C9JE40 543 aaKnown RBP7.16□□□□□ -1.26
CMSS1-207ENST00000494412 DXOO77932 396 aaKnown RBP7.16□□□□□ -1.26
CMSS1-207ENST00000494412 LMOD1P29536 600 aaPredicted RBP7.16□□□□□ -1.26
CMSS1-207ENST00000494412 EPS8L1Q8TE68 723 aa7.16□□□□□ -1.26
CMSS1-207ENST00000494412 MTMR7Q9Y216 660 aa7.16□□□□□ -1.26
CMSS1-207ENST00000494412 USTQ9Y2C2 406 aa7.16□□□□□ -1.26
CMSS1-207ENST00000494412 FCF1Q9Y324 198 aaKnown RBP7.16□□□□□ -1.26
CMSS1-207ENST00000494412 PALM3A6NDB9 673 aaPredicted RBP7.15□□□□□ -1.26
CMSS1-207ENST00000494412 JUNDP17535 347 aa7.15□□□□□ -1.26
CMSS1-207ENST00000494412 MMP16P51512 607 aa7.15□□□□□ -1.26
CMSS1-207ENST00000494412 RGS22Q8NE09 1264 aa7.15□□□□□ -1.26
CMSS1-207ENST00000494412 EMID1Q96A84 441 aaPredicted RBP7.15□□□□□ -1.26
CMSS1-207ENST00000494412 ALG2Q9H553 416 aa7.15□□□□□ -1.26
CMSS1-207ENST00000494412 ANKLE1Q8NAG6 615 aa7.14□□□□□ -1.27
CMSS1-207ENST00000494412 CARNS1A5YM72 827 aa7.13□□□□□ -1.27
CMSS1-207ENST00000494412 PER1O15534 1290 aaPredicted RBP7.13□□□□□ -1.27
CMSS1-207ENST00000494412 BRD1O95696 1058 aa7.13□□□□□ -1.27
CMSS1-207ENST00000494412 SRPK2P78362 688 aaKnown RBP7.13□□□□□ -1.27
CMSS1-207ENST00000494412 KCNA1Q09470 495 aa7.13□□□□□ -1.27
CMSS1-207ENST00000494412 CDCA8Q53HL2 280 aa7.13□□□□□ -1.27
CMSS1-207ENST00000494412 CCDC24Q8N4L8 307 aa7.13□□□□□ -1.27
CMSS1-207ENST00000494412 TFIP11Q9UBB9 837 aaKnown RBP7.13□□□□□ -1.27
CMSS1-207ENST00000494412 SOX11P35716 441 aa7.12□□□□□ -1.27
CMSS1-207ENST00000494412 SEMA3FQ13275 785 aa7.12□□□□□ -1.27
CMSS1-207ENST00000494412 NR6A1Q15406 480 aa7.12□□□□□ -1.27
CMSS1-207ENST00000494412 UCN2Q96RP3 112 aa7.12□□□□□ -1.27
CMSS1-207ENST00000494412 PRKD2Q9BZL6 878 aa7.12□□□□□ -1.27
CMSS1-207ENST00000494412 FOXD4L5Q5VV16 416 aaPredicted RBP7.11□□□□□ -1.27
CMSS1-207ENST00000494412 LYPD8Q6UX82 237 aa7.11□□□□□ -1.27
CMSS1-207ENST00000494412 LIAT1Q6ZQX7 453 aa7.11□□□□□ -1.27
CMSS1-207ENST00000494412 FOXD4L4Q8WXT5 416 aaPredicted RBP7.11□□□□□ -1.27
CMSS1-207ENST00000494412 NUDT12Q9BQG2 462 aa7.11□□□□□ -1.27
CMSS1-207ENST00000494412 DESI1Q6ICB0 168 aa7.1□□□□□ -1.27
CMSS1-207ENST00000494412 PTCRAQ6ISU1 281 aaPredicted RBP7.1□□□□□ -1.27
CMSS1-207ENST00000494412 PNMA1Q8ND90 353 aa7.1□□□□□ -1.27
CMSS1-207ENST00000494412 SLC19A1P41440 591 aa7.09□□□□□ -1.27
CMSS1-207ENST00000494412 PTPRNQ16849 979 aa7.09□□□□□ -1.27
CMSS1-207ENST00000494412 MAFBQ9Y5Q3 323 aaPredicted RBP7.09□□□□□ -1.27
CMSS1-207ENST00000494412 CCNYL3P0C7X3 344 aa7.08□□□□□ -1.28
CMSS1-207ENST00000494412 TBC1D9Q6ZT07 1266 aa7.08□□□□□ -1.28
CMSS1-207ENST00000494412 VRTNQ9H8Y1 702 aa7.08□□□□□ -1.28
CMSS1-207ENST00000494412 EVA1BQ9NVM1 165 aa7.08□□□□□ -1.28
CMSS1-207ENST00000494412 MAP10Q9P2G4 905 aa7.08□□□□□ -1.28
CMSS1-207ENST00000494412 ATG7O95352 703 aa7.07□□□□□ -1.28
CMSS1-207ENST00000494412 CTHP32929 405 aa7.07□□□□□ -1.28
CMSS1-207ENST00000494412 RBM25P49756 843 aaKnown RBP7.07□□□□□ -1.28
CMSS1-207ENST00000494412 EIF4G2P78344 907 aaKnown RBP eCLIP7.07□□□□□ -1.28
CMSS1-207ENST00000494412 IVNS1ABPQ9Y6Y0 642 aa7.07□□□□□ -1.28
CMSS1-207ENST00000494412 KCNH2Q12809 1159 aa7.06□□□□□ -1.28
CMSS1-207ENST00000494412 SPRYD7Q5W111 196 aa7.06□□□□□ -1.28
CMSS1-207ENST00000494412 ZNF428Q96B54 188 aa7.06□□□□□ -1.28
CMSS1-207ENST00000494412 TMEM88BA6NKF7 163 aa7.05□□□□□ -1.28
CMSS1-207ENST00000494412 ZBTB24O43167 697 aaPredicted RBP7.05□□□□□ -1.28
CMSS1-207ENST00000494412 ATP9BO43861 1147 aa7.05□□□□□ -1.28
CMSS1-207ENST00000494412 F12P00748 615 aaPredicted RBP7.05□□□□□ -1.28
CMSS1-207ENST00000494412 TRIM32Q13049 653 aa7.05□□□□□ -1.28
CMSS1-207ENST00000494412 V9GY48 417 aaPredicted RBP7.05□□□□□ -1.28
CMSS1-207ENST00000494412 RGS20O76081 388 aa7.04□□□□□ -1.28
CMSS1-207ENST00000494412 RPIAP49247 311 aa7.04□□□□□ -1.28
CMSS1-207ENST00000494412 NR1H3Q13133 447 aa7.04□□□□□ -1.28
CMSS1-207ENST00000494412 UNC93B1Q9H1C4 597 aa7.04□□□□□ -1.28
CMSS1-207ENST00000494412 CCDC27Q2M243 656 aa7.03□□□□□ -1.28
CMSS1-207ENST00000494412 CD2BP2O95400 341 aaKnown RBP7.02□□□□□ -1.29
CMSS1-207ENST00000494412 FBXO45P0C2W1 286 aa7.02□□□□□ -1.29
CMSS1-207ENST00000494412 SKOR1P84550 965 aa7.02□□□□□ -1.29
CMSS1-207ENST00000494412 LINC01559Q495D7 138 aa7.02□□□□□ -1.29
CMSS1-207ENST00000494412 ZNF697Q5TEC3 545 aa7.02□□□□□ -1.29
CMSS1-207ENST00000494412 ZNF598Q86UK7 904 aaKnown RBP7.02□□□□□ -1.29
CMSS1-207ENST00000494412 BAP1Q92560 729 aa7.02□□□□□ -1.29
CMSS1-207ENST00000494412 ZBBXA8MT70 800 aa7.01□□□□□ -1.29
CMSS1-207ENST00000494412 PIK3CDO00329 1044 aa7.01□□□□□ -1.29
CMSS1-207ENST00000494412 B4GALNT3Q6L9W6 998 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms